Dbfetch
ID MN154544; SV 1; linear; genomic DNA; STD; HUM; 4802 BP. XX AC MN154544; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-01100 MHC class II antigen (HLA-DRB1) gene, DE HLA-DRB1*04:11:01var allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4802 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; 80f9c359721f3d7cef033aa1366c6d22. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4802 FT /organism="Homo sapiens" FT /isolate="2018-271-01100" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <8..>4802 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04:11:01var" FT mRNA join(<8..277,3732..4013,4711..>4802) FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04:11:01var" FT /product="MHC class II antigen" FT CDS join(<8..277,3732..4013,4711..>4802) FT /codon_start=3 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*04:11:01var" FT /product="MHC class II antigen" FT /protein_id="QIA58973.1" FT /translation="RFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVEEYRAV FT TELGRPSAEYWNSQKDLLEQRRAEVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPL FT QHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSLTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFI" XX SQ Sequence 4802 BP; 1170 A; 962 C; 1096 G; 1574 T; 0 other; cccccagcac gtttcttgga gcaggttaaa catgagtgtc atttcttcaa cgggacggag 60 cgggtgcggt tcctggacag atacttctat caccaagagg agtacgtgcg cttcgacagc 120 gacgtggagg agtaccgggc ggtgacggag ctggggcggc ctagcgccga gtactggaac 180 agccagaagg acctcctgga gcagaggcgg gccgaggtgg acacctactg cagacacaac 240 tacggggttg tggagagctt cacagtgcag cggcgaggtg agcgcggcgc ggggcggggc 300 ctgagtccct gtgagcggag aatctgagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 360 tgtgtgtgag agagagagag agagagagag agagagagag agcgccatct gtgagcattt 420 agaatcctct ctatcctgag caaggagttc tgcgggcaca ggtgtgtgtg tagagtgtgg 480 atttgtccgt gtctgtgagg ctgttgtggg aggggaggca ggagggggct gcttcttatt 540 cttggagact tctgtgggga ggtgacaagg gaggtgggtg ctgggggctg gagagagagg 600 cgaccttgat tgtctcgggt ccttagagat gcaaggaagg gaaatgtatg gggtgtgtgg 660 ttggggtgaa ggtttagggg aggagagctg aggggtaagg aaggtttggg ataatgtgaa 720 gaggccagtt tcagactgtc cctggcacac acccttcatg taatctctga aataaaagtg 780 tgtgctgttt atttgtaaaa gcattagatt aacttctagg ggaattgagt agacctctga 840 ggcacctctg aagcttcttt aggtataaat ttcttgctag ttttttgttt tcttagtgtt 900 atatttttac atagttgaaa tgactgtgaa actaactttt tgaattaaag tttgagaaca 960 ctgttactat tttattataa tgctaataat ttcatagtta ctttttaaat atataatagt 1020 tgtgacacaa attacctcac tttctttgtt tttttttttc ttacacttta agttttaggg 1080 tacatgtgca caacgtgcag gtttgttaca tatgtataca tgtgccatgt tggtgtgctg 1140 cacccattaa ctcgtcattt aacattaggt atatctccta atgctatccc tccccacccc 1200 cccaccccac aacaggcccc agtgtgtgat gttccccttc ctgtgtccat gtgttctcac 1260 tgttcaattc ccacctatga gtgagaacat gcggtgttcg gttttttgtc cttgccatag 1320 tttgctgaga atgatggttt ccagcttcat ccatgtccct acaaaggaca tgaactcatt 1380 cttttttgtg gctgcatagt attccatagt gtatatgtgc cacattttct taatccagtc 1440 tatcattgtt ggacatttgg gttggttcca agtctttgct attgtgaata gtgccgcaat 1500 aaacatacat gtgcatatgt ctttatagca gcatgattta taatccttgg gttatatacc 1560 cagtaatggg atggctgggt caaatggtat ttctagttct agatccctga ggaatcgcca 1620 cactgacttc cacaatggtt gaactagttt agagtcccac caacagggta aaagtgttcc 1680 tatttctcca catcctctcc agcacctgtt gcttcctgac tttttaatga tcgccattct 1740 aactggtgtg agatggtatc tcattgtggt tttgatttgc aattctctga tggccagtga 1800 tgatgagcat tttttcatgt gtcttttggc tgcataaatg tcttcttttg agaagtgtct 1860 gttcatgtcc tttgcccact ttttgatggg gtattttgtt tttttcttgt aaatttgttt 1920 gagttcattg cagattctgg atattagccc tttgtcatat gagtagattg caaaaatttt 1980 ctcccattct gtaggttgcc tcttcactct gatggtagtt tcttttgctg tgcagaagct 2040 ctttagttta attagatccc atttgtccat tttggctttt gttgccattg cttttggtgt 2100 tttagacatg aagttcttgc ccatgcctat gtcctgaatg gtattgccta ggttttcttc 2160 tagggttttt atggtttcag gtctaacatt taagtcttta atccatcttg aattaatttt 2220 tgtataagca aattacgtca ctttccccat tgatgacctt tattatgaca ttcaccaata 2280 gttgaaaatg tatgtttctg gttaattttt gatttatatt tttttgattt gtaattattt 2340 tgaattattt tgacctattt attggccagt tgtaattact gctctgctct acgaattacc 2400 tgttgtattt ggtaggtaat ggacaatgat ctattgtctc ttatctttag ggcttagtat 2460 ttttctcagt gactttgtgg gtttgttgta ctgtaagatt attaacactt tattgatatt 2520 tgattcagta ttttctccag tttgtggtat gtatattttg aaaattcttt tccatgttaa 2580 gaatttgaac atttttattt aataaaatat attgcaaaat gttaattaat gattcacaaa 2640 ctagctcaag tctaccattt tgtggtattg atgtctccag gtttctcctt ccttcttaaa 2700 aaaaaatgta tttattgaga gtatgctagt gtcagggatt tccctaggca taagcactcc 2760 aagtaatgag tcccagacac tgccttgatc caaatgtcat tctggaaaga aaaatcattt 2820 tacagtgata agcctaataa tagttatact tgttttgcct gggagatgca ttgatcagct 2880 aaatgtaaat ataagaactt tcaaaactaa aatgacgttc cttaatcttt ctctctgctt 2940 taggaatcat gctttcttag gaacttaaag atttggagaa tcatttctgt ctgtcccacc 3000 ttcccaggag cataaccatt tctgtggtgt tctaaggtgt gagtgcatgg cagtagtatt 3060 cctaaaaatc catattcagt ttcctcatgt gccctactcc gtccctttct ctatccacat 3120 tgctttaaat catatttttc tctcaaggtg tacaaggatg ataaataggt gccaagtgga 3180 gaacccaagt gtgacgagcc ctctcacagt agaatggagt gagaagcttt ctgacctcat 3240 aaattgaagg ctatcgtaat tcattctttt atatatttta cttgcattaa tcctcatata 3300 acctcaagag gtaaattaat ataattatcc tccattattg gagagaaagt tgagacacaa 3360 aagaatcaaa aactcttcca ggatcaacca gtaaaaggca gaccttggat ttgaaccagg 3420 caacctggct cagaagtcag ttttaattac cacactctgt actttcaaag atttgtaaac 3480 gctttgacaa tgcatgtcaa tttcaagcta tgaagagcca aacataattt ttcacaatat 3540 ctctcaaatc taatgggtcc ccactataaa gattaaattc caggctgatg acactgtgag 3600 gccacatggc cagctgtgct ggaggcctgc tcaaggccag agcctaggtt tacagagaag 3660 cagacaaaaa gctaaacaag gagacttact ctgtctgcat gacttattcc ctctaccttg 3720 ttttctccta gtctatcctg aggtgactgt gtatcctgca aagacccagc ccctgcagca 3780 ccacaacctc ctggtctgct ctgtgaatgg tttctatcca ggcagcattg aagtcaggtg 3840 gttccggaac ggccaggaag agaagactgg ggtggtgtcc acaggcctga tccagaatgg 3900 agactggacc ttccagaccc tggtgatgct ggaaacagtt cctcggagtg gagaggttta 3960 cacctgccaa gtggagcacc caagcctgac gagccctctc acagtggaat ggagtgagca 4020 gctttctgac ttcataaatt tctcacccac caagacgcga actttactaa tccctgagta 4080 tcaggcttct cctatcccac atcctatttt catttgctcc acgttctcat ctccatcagc 4140 acaggtcact ggggggtagc cctgtaatac tttctagaaa cacctgtacc ccctggggaa 4200 gcagtcatgc ctgccaggca ggagaggctg tccctctttt gaacctcccc atgatgtcac 4260 aagtcggggt cacctgctgt ctgtgggctc caggccctgc ctctgggtct gagactgagt 4320 ttctggtact gttgctctga gtcgtttgtt gtaatctgag aagaggagaa gtatagggac 4380 cttcctgaca tgaggggagt ccaatctcag ctccgccttt tattagatct gtcactctag 4440 gcaactactt aacctcattg ggtctcaggc tttctgttca tcagatgttg aagtcctgtc 4500 ttacatcaag gctgtaatat ttgaatgagt ttgatgactg aaccttgtaa ctgttcagtg 4560 tgatttgaaa acctttctca agaaatggtc agttatttta gttcttgcag agcagccttc 4620 tttctcattt tcaaagctct gaatctcaag gtgtcaatta aagaggttcc atttgggata 4680 aaaatcacta aacctggctt cctctctcag gagcacggtc tgaatctgca cagagcaaga 4740 tgctgagtgg agtcgggggc ttcgtgctgg gcctgctctt ccttggggcc gggctgttca 4800 tc 4802 //