Dbfetch
ID MN154521; SV 1; linear; genomic DNA; STD; HUM; 3388 BP. XX AC MN154521; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-01060 MHC class I antigen (HLA-A) gene, DE HLA-A*30:01:01:01var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3388 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; 672271c36514745242c89d1a6b9eb19d. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3388 FT /organism="Homo sapiens" FT /isolate="2018-271-01060" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <248..>3150 FT /gene="HLA-A" FT /allele="HLA-A*30:01:01:01var" FT mRNA join(<248..320,451..720,962..1237,1817..2092,2195..2311, FT 2754..2786,2929..2976,3146..>3150) FT /gene="HLA-A" FT /allele="HLA-A*30:01:01:01var" FT /product="MHC class I antigen" FT CDS join(248..320,451..720,962..1237,1817..2092,2195..2311, FT 2754..2786,2929..2976,3146..3150) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*30:01:01:01var" FT /product="MHC class I antigen" FT /protein_id="QIA58932.1" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFSTSVSRPGSGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARWAEQLRAYLEGTCLEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3388 BP; 648 A; 974 C; 1033 G; 733 T; 0 other; gtctcaggcc ccgaaggcgg tgtatggatt ggggagtcac agccttgggg attccccaac 60 tccgcagttt cttttctccc tctcccaacc tacgtagggt ccttcatcct ggatactcac 120 gacgcggacc cagttctcac tcccattggg tgtcgggttt ccagagaagc caatcagtgt 180 cgtcgcggtc gctgttctaa agcccgcacg cacccaccgg gactcagatt ctccccagac 240 gccgaggatg gccgtcatgg cgccccgaac cctcctcctg ctactctcgg gggccctggc 300 cctgacccag acctgggcgg gtgagtgcgg ggtcgggagg gaaaccgcct ctgcggggag 360 aagcaagggg ccctcctggc gggggcgcag gaccggggga gccgcgccgg gaggagggtc 420 ggtcaggtct cagccactgc tcgcccccag gctcccactc catgaggtat ttctccacat 480 ccgtgtcccg gcccggcagt ggagagcccc gcttcatcgc agtgggctac gtggacgaca 540 cgcagttcgt gcggttcgac agcgacgccg cgagccagag gatggagccg cgggcgccgt 600 ggatagagca ggagaggcct gagtattggg accaggagac acggaatgtg aaggcccagt 660 cacagactga ccgagtggac ctggggaccc tgcgcggcta ctacaaccag agcgaggccg 720 gtgagtgacc ccggccgggg gcgcaggtca cgacccctca tcccccacgg acgggccagg 780 tcgcccacag tctccgggtc cgagatccac cccgaagccg cgggaccccg agacccttga 840 cccgggagag gcccaggcgc ctttacccgg tttcattttc agtttaggcc aaaaattccc 900 ccgggttggt cggggctggg cggggctcgg gggactgggc tgaccgcggg gtcggggcca 960 ggttctcaca ccatccagat aatgtatggc tgcgacgtgg ggtcggacgg gcgcttcctc 1020 cgcgggtatg aacagcacgc ctacgacggc aaggattaca tcgccctgaa cgaggacctg 1080 cgctcttgga ccgcggcgga catggcggct cagatcaccc agcgcaagtg ggaggcggcc 1140 cgttgggcgg agcagttgag agcctacctg gagggcacgt gcttggagtg gctccgcaga 1200 tacctggaga acgggaagga gacgctgcag cgcacgggta ccaggggcca cggggcgcct 1260 tcctgatcgc ctgtagatct cccgggctgg cctcccacaa ggaggggaga caattgggac 1320 caacactaga atatcaccct ccctctggtc ctgagggaga ggaatcctcc tgggtttcca 1380 gatcctgtac cagagagtga ctctgaggtt ccgccctgct ctctgacaca attaagggat 1440 aaaatctctg aaggagtgac gggaagacga tccctcgaat actgatgagt ggttcccttt 1500 gacaccggca gcagccttgg gcccgtgact tttcctctca ggccttgttc tctgcttcac 1560 actcaatgtg tgtgggggtc tgagtccagc acttctgagt ccctcagcct ccactcaggt 1620 caggaccaga agtcgctgtt cccttctcag ggaatagaag attatcccag gtgcctgtgt 1680 ccaggctggt gtctgggttc tgtgctctct tccccatccc gggtgtcctg tccattctca 1740 agatggccac atgcgtgctg gtggagtgtc ccatgacaga tgcaaaatgc ctgaattttc 1800 tgactcttcc cgtcagaccc ccccaagaca catatgaccc accaccccat ctctgaccat 1860 gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg 1920 cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag gcctgcaggg 1980 gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggagagga gcagagatac 2040 acctgccatg tgcagcatga gggtctgccc aagcccctca ccctgagatg gggtaaggag 2100 ggagatgggg gtgtcatgtc tcttagggaa agcaggagcc tctctggaga cctttagcag 2160 ggtcagggcc cctcaccttc ccctcttttc ccagagctgt cttcccagcc caccatcccc 2220 atcgtgggca tcattgctgg cctggttctc cttggagctg tgatcactgg agctgtggtc 2280 gctgccgtga tgtggaggag gaagagctca ggtggagaag gggtgaaggg tggggtctga 2340 gatttcttgt ctcactgagg gttccaagcc ccagctagaa atgtgccctg tctcattact 2400 gggaagcacc atccacaatc atgggcctac ccagcctggg ccctgtgtgc cagcacttac 2460 tcttttgtaa agcacctgtt aaaatgaagg acagatttat caccttgatt acggcggtga 2520 tgggacctga tcccagcagt cacaagtcac aggggaaggt ccctgaggac agacctcagg 2580 agggctattg gtccaggacc cacacctgct ttcttcatgt ttcctgatcc cgccctgggt 2640 ctgcagtcac acatttctgg aaacttctct ggggtccaag actaggaggt tcctctagga 2700 ccttaaggcc ctggctcctt tctggtatct cacaggacat tttcttctca cagatagaaa 2760 aggagggagt tacactcagg ctgcaagtaa gtatgaagga ggctgatgcc tgaggtcctt 2820 gggatattgt gtttgggagc ccatggggga gctcacccac cccacaattc ctcctctagc 2880 cacatcttct gtgggatctg accaggttct gtttttgttc taccccaggc agtgacagtg 2940 cccagggctc tgatgtgtct ctcacagctt gtaaaggtga gagcttggag gacctaatgt 3000 gtgttgggtg ttgggcggaa cagtggacac agctgtgcta tggggtttct ttgcattgga 3060 tgtattgagc atgcgatggg ctgtttaagg tgtgacccct cactgtgatg gatatgaatt 3120 tgttcatgaa tatttttttc tatagtgtga gacagctgcc ttgtgtggga ctgagaggca 3180 agagttgttc ctgcccttcc ctttgtgact tgaagaaccc tgactttgtt tctgcaaagg 3240 cacctgcatg tgtctgtgtt cgtgtaggca taatgtgagg aggtggggag accaccccac 3300 ccccatgtcc accatgaccc tcttcccacg ctgacctgtg ctccctcccc aatcatcttt 3360 cctgttccag agaggtgggg ctgaggtg 3388 //