Dbfetch
ID MN154475; SV 1; linear; genomic DNA; STD; HUM; 3126 BP. XX AC MN154475; XX DT 20-FEB-2020 (Rel. 143, Created) DT 20-FEB-2020 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 2018-271-00964 MHC class I antigen (HLA-B) gene, DE HLA-B*40:01:02:01var allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3126 RA York S.L., Ivery K.J., Williams J.D.; RT ; RL Submitted (08-JUL-2019) to the INSDC. RL DNA Identity, LabCorp, 1440 York Ct, Burlington, NC 277215, USA XX DR MD5; 6435d5ed8e65664a87b7ae71f974fc70. XX CC ##Assembly-Data-START## CC Assembly Method :: LAA2 v. 10/2018 CC Coverage :: >100 X CC Sequencing Technology :: PacBio CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3126 FT /organism="Homo sapiens" FT /isolate="2018-271-00964" FT /mol_type="genomic DNA" FT /country="Argentina" FT /db_xref="taxon:9606" FT gene <241..>2916 FT /gene="HLA-B" FT /allele="HLA-B*40:01:02:01var" FT mRNA join(<241..313,442..711,957..1232,1807..2082,2176..2292, FT 2734..2766,2873..>2916) FT /gene="HLA-B" FT /allele="HLA-B*40:01:02:01var" FT /product="MHC class I antigen" FT CDS join(241..313,442..711,957..1232,1807..2082,2176..2292, FT 2734..2766,2873..2916) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*40:01:02:01var" FT /product="MHC class I antigen" FT /protein_id="QIA58898.1" FT /translation="MRVTAPRTVLLLLSAALALTETWADSHSMRYFHTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" XX SQ Sequence 3126 BP; 578 A; 906 C; 993 G; 649 T; 0 other; caggctccga gggccgcgtc tgcaatgggg aggcgcagcg ttggggattc cccactccca 60 cgagtttcac ttcttctccc aacctatgtc gggtccttct tccaggatac tcgtgacgcg 120 tccccatttc ccactcccat tgggtgtcgg gtgtctagag aagccaatca gcgtcgccgt 180 ggtcccagtt ctaaagtccc cacgcaccca cccggactca gaatctcctc agacgccgag 240 atgcgggtca cggcaccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc 300 gagacctggg ccggtgagtg cgggtcggca gggaaatggc ctctgtgggg aggagcgagg 360 ggaccgcagg cgggggcgca ggacccgggg agccgcgccg ggaggagggt cgggcgggtc 420 tcagctcctc ctcgccccca gactcccact ccatgaggta tttccacacc gccatgtccc 480 ggcccggccg cggggagccc cgcttcatca ccgtgggcta cgtggacgac acgctgttcg 540 tgaggttcga cagcgacgcc acgagtccga ggaaggagcc gcgggcgcca tggatagagc 600 aggaggggcc ggagtattgg gaccgggaga cacagatctc caagaccaac acacagactt 660 accgagagag cctgcggaac ctgcgcggct actacaacca gagcgaggcc ggtgagtgac 720 cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga 780 gtctccgggt ccgagatccg accccctgag gccgcgggac ccgcccagac cctcgaccgg 840 cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg 900 ttggtcgggg cggggcgggg ctcgggggac tgggctgacc gcggggccgg ggccagggtc 960 tcacaccctc cagaggatgt acggctgcga cgtggggccg gacgggcgcc tcctccgcgg 1020 gcataaccag tacgcctacg acggcaagga ttacatcgcc ctgaacgagg acctgcgctc 1080 ctggaccgcc gcggacacgg cggctcagat ctcccagcgc aagttggagg cggcccgtgt 1140 ggcggagcag ctgagagcct acctggaggg cgagtgcgtg gagtggctcc gcagatacct 1200 ggagaacggg aaggacaagc tggagcgcgc tggtaccagg ggcagtgggg agccttcccc 1260 atctcctata ggtcgccggg gatggcctcc cacgagaaga ggaggaaaat gggatcagcg 1320 ctagaatgtc gccctccgtt gaatggagaa tggcatgagt tttcctgagt ttcctctgag 1380 ggccccctct tctctctaga caattaagga atgacgtctc tgaggaaatg gaggggaaga 1440 cagtccctag aatactgatc aggggtcccc tttgacccct gcagcagcct tgggaaccgt 1500 gacttttcct ctcaggcctt gttctctgcc tcacactcag tgtgtttggg gctctgattc 1560 cagcacttct gagtcacttt acctccactc agatcaggag cagaagtccc tgttccccgc 1620 tcagagactc gaactttcca atgaatagga gattatccca ggtgcctgcg tccaggctgg 1680 tgtctgggtt ctgtgcccct tccccacccc aggtgtcctg tccattctca ggctggtcac 1740 atgggtggtc ctagggtgtc ccatgaaaga tgcaaagcgc ctgaattttc tgactcttcc 1800 catcagaccc cccaaagaca cacgtgaccc accaccccat ctctgaccat gaggccaccc 1860 tgaggtgctg ggccctgggt ttctaccctg cggagatcac actgacctgg cagcgggatg 1920 gcgaggacca aactcaggac actgagcttg tggagaccag accagcagga gatagaacct 1980 tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg 2040 tacagcatga ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg 2100 ggtcatatct cttctcaggg aaagcaggag cccttcagca gggtcagggc ccctcatctt 2160 cccctccttt cccagagccg tcttcccagt ccaccgtccc catcgtgggc attgttgctg 2220 gcctggctgt cctagcagtt gtggtcatcg gagctgtggt cgctgctgtg atgtgtagga 2280 ggaagagttc aggtagggaa ggggtgaggg gtggggtctg ggttttcttg tcccactggg 2340 ggtttcaagc cccaggtaga agtgttccct gcctcattac tgggaagcag catgcacaca 2400 ggggctaacg cagcctggga ccctgtgtgc cagcacttac tcttttgtgc agcacatgtg 2460 acaatgaagg atggatgtat caccttgatg gttgtggtgt tggggtcctg attccagcat 2520 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tggtccagga 2580 cccacacttg ctttcctcgt gtttcctgat cctgccctgg gtctgtagtc atacttctgg 2640 aaattccttt tgggtccaag actaggaggt tcctctaaga tctcatggcc ctgcttcctc 2700 ccagtgccct cacaggacat tttcttccca caggtggaaa aggagggagc tactctcagg 2760 ctgcgtgtaa gtggtggggg tgggagtgtg gaggagctca cccaccccat aattcctcct 2820 gtcccacgtc tcctgcgggc tctgaccagg tcctgttttt gttctactcc aggcagcgac 2880 agtgcccagg gctctgatgt gtctctcaca gcttgaaaag gtgagattct tggggtctag 2940 agtgggtggg gtggcgggtc tgggggtggg tggggcagag gggaaaggcc tgggtaatgg 3000 ggattctttg attgggatgt ttcgcgtgtg tggtgggctg tttagagtgt catcgcttac 3060 catgactaac cagaatttgt tcatgactgt tgttttctgt agcctgagac agctgtcttg 3120 tgaggg 3126 //