Dbfetch

Dbfetch

ID   MK978783; SV 1; linear; genomic DNA; STD; HUM; 883 BP.
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AC   MK978783;
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DT   24-OCT-2019 (Rel. 142, Created)
DT   24-OCT-2019 (Rel. 142, Last updated, Version 1)
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DE   Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*02var allele,
DE   partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-883
RA   Tsamadou C., Furst D., Neuchel C., Mytilineos J.;
RT   "A new HLA-DPA1*02:01 variant";
RL   Unpublished.
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RN   [2]
RP   1-883
RA   Tsamadou C., Furst D., Neuchel C., Mytilineos J.;
RT   ;
RL   Submitted (28-MAY-2019) to the INSDC.
RL   Transplantation Immunologie, IKT Ulm, Helmholtzstrasse 10, Ulm 89081,
RL   Germany
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DR   MD5; 046da71bef1a68f3ed3dbd0c74d36d48.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..883
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>883
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT   mRNA            join(<1..246,347..628,729..>883)
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..246,347..628,729..883)
FT                   /codon_start=3
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QFQ66457.1"
FT                   /translation="DHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEF
FT                   GRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLIC
FT                   HIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRFHKFHYLTFVPSAEDVYDCRVE
FT                   HWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRA
FT                   QGPL"
FT   gap             247..346
FT                   /estimated_length=unknown
FT   gap             629..728
FT                   /estimated_length=unknown
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SQ   Sequence 883 BP; 146 A; 195 C; 188 G; 154 T; 200 other;
     cggaccatgt gtcaacttat gccgcgtttg tacagaccca tagaccaaca ggggagttta        60
     tgtttgaatt tgatgaagat gagcagttct atgtggatct ggataaaaag gagaccgtct       120
     ggcatctgga ggagtttggc cgagcctttt cctttgaggc tcagggcggg ctggctaaca       180
     ttgctatatt gaacaacaac ttgaatacct tgatccagcg ttccaaccac actcaggccg       240
     ccaatgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnatcc ccctgaggtg       360
     accgtgtttc ccaaggagcc tgtggagctg ggccagccca acaccctcat ctgccacatt       420
     gacaggttct tcccaccagt gctcaacgtc acatggctgt gcaatgggga gccagtcact       480
     gagggtgtcg ctgagagcct cttcctgccc agaacagatt accgcttcca caagttccat       540
     tacctgacct ttgtgccctc agcagaggac gtctatgact gcagggtgga gcactggggc       600
     ttggaccagc cgctcctcaa gcactgggnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnag gcccaagagc caatccagat gcctgagaca acggagactg tgctctgtgc       780
     cctgggcctg gtgctgggcc tagtgggcat catcgtgggc accgtcctca tcataaagtc       840
     tctgcgttct ggccatgacc cccgggccca ggggcccctg tga                         883
//