Dbfetch
ID MK965958; SV 1; linear; genomic DNA; STD; HUM; 3333 BP.
XX
AC MK965958;
XX
DT 04-JAN-2020 (Rel. 143, Created)
DT 04-JAN-2020 (Rel. 143, Last updated, Version 1)
XX
DE Homo sapiens isolate BY01780 HLA class I histocompatibility antigen (HLA-A)
DE gene, HLA-A*02:33 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3333
RA Lazaro A., Hou L., Desphy M.A., Persaud M., Enriquez E., Tate M.,
RA Hurley C.;
RT ;
RL Submitted (22-MAY-2019) to the INSDC.
RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852,
RL USA
XX
DR MD5; c766a40ca0b31be1482a81c27497a49a.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v.
CC V2.13.0.12966; Sequencher v. V5.4.6
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3333
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="BY01780"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3333
FT /gene="HLA-A"
FT /allele="HLA-A*02:33"
FT mRNA join(<117..189,320..589,831..1106,1707..1982,2082..2198,
FT 2637..2669,2812..2859,3029..>3033)
FT /gene="HLA-A"
FT /allele="HLA-A*02:33"
FT /product="HLA class I histocompatibility antigen"
FT CDS join(117..189,320..589,831..1106,1707..1982,2082..2198,
FT 2637..2669,2812..2859,3029..3033)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*02:33"
FT /product="HLA class I histocompatibility antigen"
FT /protein_id="QGY93892.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
FT LRGYYNQSEAGSHTVQRMSGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA
FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDVSLTACKV"
XX
SQ Sequence 3333 BP; 644 A; 956 C; 1010 G; 723 T; 0 other;
agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60
cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120
ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggctctggcc ctgacccaga 180
cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaacgggc 240
ccgcctggcg ggggcgcagg acccgggaag ccgcgccggg aggagggtcg ggcgggtctc 300
agccactcct cgtccccagg ctctcactcc atgaggtatt tcttcacatc cgtgtcccgg 360
cccggccgcg gggagccccg cttcatcgca gtgggctacg tggacgacac gcagttcgtg 420
cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag 480
gagggtccgg agtattggga cggggagaca cggaaagtga aggcccactc acagactcac 540
cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc 600
cggcccgggg cgcaggtcac gacctctcat cccccacgga cgggccaggt cgcccacagt 660
ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg 720
cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc caggttggtc 780
ggggcggggc ggggctcggg ggaccgggct gaccgcgggg tccgggccag gttctcacac 840
cgtccagagg atgtctggct gcgacgtggg gtcggactgg cgcttcctcc gcgggtacca 900
ccagtacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac 960
cgcggcggac atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga 1020
gcagttgaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa 1080
cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1140
tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1200
tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1260
agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1320
aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag 1380
gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1440
gtgtgtgggg gtctgagtcc agcacttctg agtccttcag cctccactca ggtcaggacc 1500
agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag 1560
gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg 1620
tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc 1680
ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt 1740
ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 1800
actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 1860
gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggacagga 1920
gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg 1980
gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct 2040
ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac 2100
catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc 2160
tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg 2220
gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc 2280
gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc 2340
acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag 2400
cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc 2460
aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg 2520
ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta 2580
ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag 2640
aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc 2700
cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct 2760
agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca 2820
gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga 2880
tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt 2940
ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga 3000
atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag 3060
gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa 3120
aggcacctgc atgtgtctgt gttcgtgtag gcataatgtg aggaggtggg gagaccaccc 3180
cacccccatg tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc 3240
tttcctgttc cagagaggtg gggctgaggt gtctccatct ctgtctcaac ttcatggtgc 3300
actgagctgt aacttcttcc ttccctatta aaa 3333
//