Dbfetch
ID MK953668; SV 1; linear; genomic DNA; STD; HUM; 5199 BP. XX AC MK953668; XX DT 28-NOV-2019 (Rel. 143, Created) DT 28-NOV-2019 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens isolate 6518064402 MHC class II antigen (HLA-DQB1) gene, DE HLA-DQB1*02:02 allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-5199 RA Texeraud E., Bertrand G.; RT ; RL Submitted (21-MAY-2019) to the INSDC. RL Histocombatibility Laboratory (HLA Lab), EFS of Rennes, Rue Pierre-Jean RL Gineste BP91614, Rennes Cedex, Bretagne 35016, France XX DR MD5; ab5c18c2b4a202fee36335071472352e. XX CC ##Assembly-Data-START## CC Assembly Method :: omixon HLA Twin v. 3.1.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5199 FT /organism="Homo sapiens" FT /isolate="6518064402" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>167 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02" FT mRNA <1..>167 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02" FT /product="MHC class II antigen" FT CDS <1..167 FT /codon_start=3 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02" FT /product="MHC class II antigen" FT /protein_id="QGN03609.1" FT /translation="DFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAV FT TLLGLPAAE" XX SQ Sequence 5199 BP; 1316 A; 1200 C; 1226 G; 1457 T; 0 other; aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggaca gagcgcgtgc 60 gtcttgtgag cagaagcatc tataaccgag aagagatcgt gcgcttcgac agcgacgtgg 120 gggagttccg ggcggtgacg ctgctggggc tgcctgccgc cgagtagtgg aacagccaga 180 aggacatcct ggagaggaaa cgggcggcgg tggacagggt gtgcagacac aactaccagt 240 tggagctccg cacgaccttg cagcggcgag gtgagcggcg tcgcccctct gcgaggccca 300 cccttggccc caagtctctg cgccaggagg ggcgaagggt cgttgcctct ggaacctgag 360 ccccgtttgt tccaccccag aggacaggag gcagcggcga gagtggtggg ggcaggtgca 420 tcggaggtgc ggggacctag ggcagagcag ggggacaggc agagttggcc aggctgccta 480 gtgtcgcccc agcctacccg ttcgtcggcc ttgtcctctg ctctgcatgt tcttgcctcg 540 tgccttatgc atttgcctcc ttttgcctta cctttgctaa gcagctctct ctgctcagaa 600 tgcccgccct cttcccctgc ccgcccgccc gccccgctag cactgcccca cccagcaagg 660 cccacgtgca cagctcttgc agcaggaagc ttcaggctta gcctggtgga gttagggctg 720 ttccacaact gcgcgcagga catccagcaa ttacagttgt gaaataagat attttaactt 780 ttggcttcaa atcattattc atcgtaattc tgttttctta aatggctctc attcatggca 840 gagatctttg aggtgagggt gttttaatca ttgcatgcct agtacctgac acattgactg 900 gtatgtggtg tgagctcaat gatcttctgt taaattaatg aataaatgta ctcagctgcc 960 catccactta ggctcaagaa aaaaaaagag gtaaacagag ccttaaaaat ggactttatt 1020 aattattttc tataattttg cttaatgctt taaagtaaac tcttattgac ttggatctta 1080 atagagtttg tgaatacaaa atctgaggaa aaaagttttt gctaaaaata aaaacaacgc 1140 ttgaaagata ttgtaatgca gtttaaattt cttttctttt tttttttttt ttttgagacg 1200 gattctcact ctgtcgccca ggccggagtg cagtggcgcg atctcggctc actgcaagct 1260 ccgcctcccg ggttcacgcc attctcctgc ctcagcctcc tgagtaggtg ggattacagg 1320 cgcgtgccac cacgcccggc taattttttt gtatttttag tagaggcggg gtttcaccgt 1380 gttagccagg atggtctgga tctcctgacc tcatgatccg cccgcctcgg cctcccaaag 1440 tgctgggatt acaggtgtga gccacagtgc ccggccggca cttttaattt cttagaaaag 1500 ctgaacaaat ggcacaatgc aaagagcaaa agttttggaa taaatagatt gaagccatta 1560 aattattgga taaaaatagt ttcgggttgc ttttggccta ggttctcccc tccccccatg 1620 actatccact tcaggaataa acattctgaa agtcaatttt acccatttag tgagcattta 1680 tttctagaca gttgccttat caaataccat ctatgttacg tcatttaatc tcacagttac 1740 ttgtgcatca gagattagca tcaccacttt atatattggt acatgataaa cactttattg 1800 gtcatggatg gggagatggt cactgtaggc taatattggt acatgataaa cactttaagt 1860 aatcagccca taattgctca ccaagacctt aagcctccca aagtacacaa cattctttgt 1920 gttcttcact acacatccat agagtctaag ggacgtaaag cctcgttaaa gccagttttg 1980 accagaagca gcaatgagtc tattcctgtg tgttttccat gttaatggga caaaatgata 2040 ctttcaaggc attgaaaatt catgattaat caatcgctag tctgacccca gtgttatcta 2100 tgcaggtttg caaaaccttt agtttactta atactccctt gccttctttt gattcacatc 2160 ctaatgccag caaatactta tgtttttgct atttcagttc catttccata aaatttattt 2220 tatcatcttt tctcataaat ttatgccctc tatttttact cccaatctgt ttaagatgaa 2280 caaatcttat aaggccacat agctgactgt tatttctgtt ggactccagg aaggagaacc 2340 taaagaaaag ttcaagtcca agcagaaacc gtgatttctt ccagatgatg gctcatgagt 2400 gccatttaat tggggtgcca cctggtgacc tcagcaaatc ccagctatat ttatgtgttc 2460 acattacagg atcattaacc cagaccgacc actgcacaga tctcagaata ttttctatgg 2520 agaacataca taataatgcc tgatttcaga agaagaaagt aattctcaat agcaagggga 2580 tggagtaggg tagacagctg taattaaact cacttgtgtg ataaaaagaa attaaggaaa 2640 aaagaaaatg agagaacata ttactaaata aagaaagcat acattaaata tttactatag 2700 tttcacacta agagaataaa ggaaatgcaa taaagtggcc tgaaaggtaa aggatgagat 2760 gtgtaaaggg gtgtagtatt tttactatga gcagcaatct gagaagataa aggaatcgag 2820 ttacgggcaa acatgatgtt tgatcagtgt tatttgtttt caaggcctgc ctaaattttt 2880 ttcaaatatt acaaactttt gaaataacat tctttttgtt ttttgctgtc tgttactagg 2940 ttgcacattt tataaaggca gggaccatgg tatgttgttt gtctttggat tctcagtgat 3000 tgttatattt atatttgttg aaggaacctt aatccaagac ttggactcca agtatctttc 3060 cactctggtt ccaaggaggg accttcctca cagcaggcat gctgtgtggt ctcacatctc 3120 actcctatat ctttccctgt ctgttactgc cctcagtgga gcccacagtg accatctccc 3180 catccaggac agaggccctc aaccaccaca acctgctggt ctgctcggtg acagatttct 3240 atccagccca gatcaaagtc cggtggtttc ggaatggcca ggaggagaca gctggcgttg 3300 tgtccacccc ccttattagg aatggtgact ggaccttcca gatcctggtg atgctggaaa 3360 tgactcccca gcgtggagac gtctacacct gccacgtgga gcaccccagc ctccagagcc 3420 ccatcaccgt ggagtggcgt aaggggatat tgagtttctg ttactgtggg ccccacaaga 3480 caaaggacag agctccttct gacccatccc ttcccatctc ttatccctga tgtcactgct 3540 gagctgggaa tcacaggaga ctagagcacc tctagttcca tggcgagtgc atcagaagaa 3600 tcctgatctc atcacctttc cagatgctag ggaaattact ctacatactg ttgctctgga 3660 tcccagtcct gattgctctg aggaactgat tattagggct ggtgactggg atcttagggt 3720 ctaagtttat ggatgagttc ctgaggagtg gagatctgct tccccactct gtcacctact 3780 cactgtatcc aagtacctat tggctggcct ttccctccct taggggtggt ctgaatggag 3840 aactaggttc ctttgatgcc ttcacctcct gcatctcaga ctggacttca gctcctcatc 3900 agggaaacta tggggtatgg ggacaaacac tgacactcag gctctgcttc tcaggggctc 3960 aatctgaatc tgcccagagc aagatgctga gtggcattgg aggcttcgtg ctggggctga 4020 tcttcctcgg gctgggcctt atcatccatc acaggagtca gaaaggtgag gaaccccagg 4080 ggaaaagggg aagatggcct gtgacccaga ccctctgttc agagaggtcc tgtctctaga 4140 tgtagctctt tcctcctgac cctgagagga agaaagctga gctggaagtg gaaggagaca 4200 ggacaaggtt ggaggaggca ttggaatctg attttactag ctgaagggta gccctgtcac 4260 agagctgact gatagagctt attccagggc atccttacca ttcatcattg tctcactggc 4320 tcctttccaa aaacttcctc cattaagagg gtcagagcct cggcctcctt gccttctagt 4380 gacaatttcc tttattttag gggattttaa attagggtgc ttaaggactt gaagaacatg 4440 aatgggaaga gaatataact ctaattaagt cacatgtgtc attttccttt ggggtgagag 4500 agtggctgtt catgtaatga gacctttctc tgcataactt ccttttgtaa gacctcaagg 4560 gcctccacca gcaggtaata tttcagccgt gatccagtgt ggggagggca caggtgtaag 4620 agggaagagc atgagctgag tgtacctgac agtagtggtc tctgttcatg gtatatttgc 4680 tgctatgagg atcaagactt aggggtgaag tttgccagtt tctaggaatc tccagaggtt 4740 gttccccaga accaagcctt aactttggtg gtatcttcct gtgaaatgtg gagccagaac 4800 cacggcttaa atgttagaca ctaggatgat gcccactttg tgccacatga tggtggctac 4860 tgcctgtagg cattttccag tgactgaaag aggctgctag tggtagggat gaggtatcat 4920 ccaatttcct aaaaagattg aacccttcat attcaccaga agagtaacag ctgttccccc 4980 acctcccaca catctgcatc aagctgaagt tctgtgtctt catgagctga tttcaccttt 5040 gcacagatct tgggggaggt gatgataata cactctggac ctcagctttg tctgtctgaa 5100 gctgcaggag gcccctgagg ggtgggggag atggcaggcc caccagcgta ccctgtgctg 5160 atcatccctc ttctctcttc ttcagggctc ctgcactga 5199 //