Dbfetch
ID MK907694; SV 1; linear; genomic DNA; STD; HUM; 2978 BP. XX AC MK907694; XX DT 02-DEC-2019 (Rel. 143, Created) DT 02-DEC-2019 (Rel. 143, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-B) gene, HLA-B*81var allele, complete DE cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2978 RA Gautreaux M.D., Kiger D.F., Ingram K.J., Weavil K.B.; RT ; RL Submitted (09-MAY-2019) to the INSDC. RL Pathology - HLA/Immunogenetics Laboratory, Wake Forest Baptist Health, RL Medical Center Blvd, Winston-Salem, NC 27157, USA XX DR MD5; e50d34e8b5736b123f06fd288332f1a1. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.13.0.12966 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2978 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>2978 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT mRNA join(<1..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..>2978) FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /product="MHC class I protein" FT exon <1..357 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=1 FT 5'UTR <1..284 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /product="MHC class I protein" FT /protein_id="QGN67789.1" FT /translation="MLVMAPRTVLLLLWGAVALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQISQRKLEAARVAEQLRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWTAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=6 FT exon 2917..>2978 FT /gene="HLA-B" FT /allele="HLA-B*81var" FT /number=7 FT 3'UTR 2961..>2978 FT /gene="HLA-B" FT /allele="HLA-B*81var" XX SQ Sequence 2978 BP; 553 A; 888 C; 934 G; 603 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120 tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca cttcccactc 180 ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420 cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcacc 480 cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540 gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagc 1020 atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcataa ccagtacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140 acggcggctc agatctccca gcgcaagttg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac 1260 aagctggagc gcgctggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccatc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtggacagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttctggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520 gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760 acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820 ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggg 2978 //