Dbfetch
ID MK875789; SV 1; linear; genomic DNA; STD; HUM; 2987 BP. XX AC MK875789; XX DT 25-SEP-2019 (Rel. 142, Created) DT 25-SEP-2019 (Rel. 142, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-B) gene, HLA-B*15:546Q allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2987 RA Delphin N., Malard S., Hays C., Kheav V.-D., Carmagnat M., Rozemuller E., RA Penning M., Theodorou I.; RT "New HLA-B allele"; RL Unpublished. XX RN [2] RP 1-2987 RA Delphin N., Malard S., Hays C., Kheav V.-D., Carmagnat M., Rozemuller E., RA Penning M., Theodorou I.; RT ; RL Submitted (01-MAY-2019) to the INSDC. RL Support, GenDx, Yalelaan 48, Utrecht 3584 CM, Netherlands XX DR MD5; e5d5135f451deb932f3decd9d9490974. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.13.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2987 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>2987 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT mRNA join(<1..354,483..752,998..1273,1849..2124,2229..2345, FT 2787..2819,2926..>2987) FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /product="MHC class I protein" FT exon <1..354 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=1 FT 5'UTR <1..284 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT CDS join(285..354,483..752,998..1273,1849..2124,2229..2345, FT 2787..2819,2926..2969) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /product="MHC class I protein" FT /protein_id="QEQ55431.1" FT /translation="MRVTAPRTLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPRF FT IAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETRNMKASAQTYRENLRIA FT LRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAA FT QITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEA FT TLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYT FT CHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGKG FT GSYSQAASSDSAQGSDVSLTA" FT exon 483..752 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=2 FT exon 998..1273 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=3 FT exon 1849..2124 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=4 FT exon 2229..2345 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=5 FT exon 2787..2819 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=6 FT exon 2926..>2987 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" FT /number=7 FT 3'UTR 2970..>2987 FT /gene="HLA-B" FT /allele="HLA-B*15:546Q" XX SQ Sequence 2987 BP; 550 A; 900 C; 939 G; 598 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagt gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctgctgctc tcgggagccc tggccctgac cgagacctgg gccggtgagt 360 gcgggtcggg agggaaatgg cctctgtggg gaggagcgag gggaccgcag gcgggggcgc 420 aggacccggg gagccgcgcc gggaggaggg tcgggcgggt ctcagcccct cctcgccccc 480 aggctcccac tccatgaggt atttctacac cgccatgtcc cggcccggcc gcggggagcc 540 ccgcttcatc gcagtgggct acgtggacga cacccagttc gtgaggttcg acagcgacgc 600 cgcgagtccg aggatggcgc cccgggcgcc atggatagag caggaggggc cggagtattg 660 ggaccgggag acacggaaca tgaaggcctc cgcgcagact taccgagaga acctgcggat 720 cgcgctccgc tactacaacc agagcgaggc cggtgagtga ccccggcccg gggcgcaggt 780 cacgactccc catcccccac gtacggcccg ggtcgccccg agtctccggg tccgagatcc 840 gcccccctga ggccgcggga cccgcccaaa ccctcgaccg gcgagagccc caggcgcgtt 900 tacccggttt cattttcagt tgaggccaaa atccccgcgg gttggtcggg gcggggcggg 960 gctcggggga cggggctgac cgcggggcct gggccagggt ctcacaccct ccagaggatg 1020 tacggctgcg acgtggggcc ggacgggcgc ctcctccgcg ggtaccacca ggacgcctac 1080 gacggcaagg attacatcgc cctgaacgag gacctgagct cctggaccgc ggcggacacg 1140 gcggctcaga tcacccagcg caagtgggag gcggcccgtg aggcggagca gctgagagcc 1200 tacctggagg gcctgtgcgt ggagtggctc cgcagatacc tggagaacgg gaaggagacg 1260 ctgcagcgcg cgggtaccag gggcagtggg gagccttccc catctcctat aggtcgccgg 1320 ggatggcctc ccacgagaag aggaggaaaa tgggatcagc gctagaatgt cgccctccct 1380 tgaatggaga atggcatgag ttttcctgag tttcctctga gggccccctc ttctctctag 1440 gacaattaag ggatgacgtc tctgaggaaa tggaggggaa gacagtccct aggatagtga 1500 tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc gtgacttttc ctctcaggcc 1560 ttgttctctg cctcacactc agtgtgtttg gggctctgat tccagcactt ctgagtcact 1620 ttacctccac tcagatcagg agcagaagtc cctgttcccc gctcagagac tcgaactttc 1680 caatgaatag gagattatcc caggtgcctg cgtccaggct ggtgtctggg ttctgtgccc 1740 cttccccacc ccaggtgtcc tgtccattct caggctggtc acatgggtgg tcctagggtg 1800 tcccatgaga gatgcaaagc gcctgaattt tctgactctt cccatcagac cccccaaaga 1860 cacatgtgac ccaccacccc atctctgacc atgaggccac cctgaggtgc tgggccctgg 1920 gcttctaccc tgcggagatc acactgacct ggcagcggga tggcgaggac caaactcagg 1980 acaccgagct tgtggagacc agaccagcag gagatagaac cttccagaag tgggcagctg 2040 tggtggtgcc ttctggagaa gagcagagat acacatgcca tgtacagcat gaggggctgc 2100 cgaagcccct caccctgaga tggggtaagg agggggatga ggggtcatat ctgttctcag 2160 ggaaagcagg agcccttctg gagcccttca gcagggtcag ggcccctcat cttcccctcc 2220 tttcccagag ccatcttccc agtccaccat ccccatcgtg ggcattgttg ctggcctggc 2280 tgtcctagca gttgtggtca tcggagctgt ggtcgctact gtgatgtgta ggaggaagag 2340 ctcaggtagg gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca 2400 agccccaggt agaagtgttc cctgcctcat tactgggaag cagcatccac acaggggcta 2460 acgcagcctg ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga 2520 aggacagatg tatcgccttg atggttgtgg tgttggggtc ctgattccag cattcatgag 2580 tcaggggaag gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac 2640 ttgctttcct cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc 2700 ttttggttcc aagacgagga ggttcctcta agatctcatg gtcctgcttc ctcccagtcc 2760 cctcacagga cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg 2820 taagtggtgg gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac 2880 gtctcctgcg ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc 2940 agggctctga tgtgtctctc acagcttgaa aaggtgagat tcttggg 2987 //