Dbfetch
ID MK860180; SV 1; linear; genomic DNA; STD; HUM; 2964 BP.
XX
AC MK860180;
XX
DT 06-DEC-2019 (Rel. 143, Created)
DT 06-DEC-2019 (Rel. 143, Last updated, Version 1)
XX
DE Homo sapiens MHC class I protein (HLA-C) gene, HLA-C*07var allele, exons 1
DE through 6 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2964
RA Gautreaux M.D., Kiger D.F., Ingram K.J., Brown S.B.;
RT ;
RL Submitted (26-APR-2019) to the INSDC.
RL Pathology - HLA/Immunogenetics Laboratory, Wake Forest Baptist Health,
RL Medical Center Blvd, Winston-Salem, NC 27157, USA
XX
DR MD5; cab8b448b227ce353d22780b94ae6311.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.13.0.12966
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..2964
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>2964
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT mRNA join(<1..364,495..764,1015..1290,1878..2153,2278..2397,
FT 2838..>2870)
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /product="MHC class I protein"
FT exon <1..364
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=1
FT 5'UTR <1..291
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT CDS join(292..364,495..764,1015..1290,1878..2153,2278..2397,
FT 2838..>2870)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /product="MHC class I protein"
FT /protein_id="QGP73411.1"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG
FT KGGSCSQAA"
FT exon 495..764
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=2
FT exon 1015..1290
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=3
FT exon 1878..2153
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=4
FT exon 2278..2397
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=5
FT exon 2838..2870
FT /gene="HLA-C"
FT /allele="HLA-C*07var"
FT /number=6
XX
SQ Sequence 2964 BP; 547 A; 901 C; 928 G; 588 T; 0 other;
aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcat tggggaggcg ccgcgttggg gattctccac tcccctgagt 120
ttcacttctc ccaacctgcg tcgggtcctt cttcctgaat actcatgacg cgtccccaat 180
tcccactccc attgggtgtc gggttctaga gaagccaatc agcgtctccg cagtcccggt 240
tctaaagtcc ccagtcaccc acccggactc acattctccc cagaggccga gatgcgggtc 300
atggcgcccc gagccctcct cctgctgctc tcgggaggcc tggccctgac cgagacctgg 360
gcctgtgagt gcggggttgg gagggaagcg gcctctgcgg agaggagcga ggggcccgcc 420
cggcgagggc gcaggacccg gggagccgcg cagggaggtg ggtcgggcgg gtctcagccc 480
ctcctcgccc ccaggctccc actccatgag gtatttcgac accgccgtgt cccggcccgg 540
ccgcggagag ccccgcttca tctcagtggg ctacgtggac gacacgcagt tcgtgcggtt 600
cgacagcgac gccgcgagtc cgagagggga gccgcgggcg ccgtgggtgg agcaggaggg 660
gccggagtat tgggaccggg agacacagaa ctacaagcgc caggcacagg ctgaccgagt 720
gagcctgcgg aacctgcgcg gctactacaa ccagagcgag gacggtgagt gaccccggcc 780
cggggcgcag gtcacgaccc ctccccatcc cccacggacg gcccgggtcg ccccgagtct 840
ccccgtctga gatccacccc aaggtggatc tgcggaaccc gcccagaccc tcgaccggag 900
agagccccag tcgcctttac ccggtttcat tttcggttta ggccaaaatc cccgcgggtt 960
ggtcggggcg gggcggggct cgggggactg ggctgaccgc gggggcgggg ccagggtctc 1020
acaccctcca gaggatgtat ggctgcgacc tggggcccga cgggcgcctc ctccgtgggt 1080
atgaccagtc cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctcct 1140
ggaccgccgc ggacaccgcg gctcagatca cccagcgcaa gttggaggcg gcccgtgcgg 1200
cggagcagct gagagcctac ctggagggca cgtgcgtgga gtggctccgc agatacctgg 1260
agaacgggaa ggagacgctg cagcgcgcag gtaccagggg cagtggggag ccttccccat 1320
ctcctataga tctcccggga tggcctccca cgaggagggg aggaaaatgg gatcagcact 1380
ggaatatcgc cctcccttga atggagaatg gcatgagttt tcctgagttt cctctgaggg 1440
ccccctctgc tctctaggac aattaaggga tgaagtctct gaggaaatgg aggggaagac 1500
agtccctgga atactgatca ggggtctcct ttgaccactt tgaccactgc agcagctgtg 1560
gtcaggctgc tgacctttct ctcaggcctt gttctctgcc tcacactcaa tgtgtctgaa 1620
ggtttgattc cagcttttct gagtcctgca gcctccactc aggtcaggac cagaagtcgc 1680
tgttcctccc tcagagacta gaactttcca atgaatagga gattatccca ggtgcctgtg 1740
tccaggctgg cgtctgggtt ctgtgccgcc ttccccaccc caggtgtcct gtccattctc 1800
aggatggtca catgggcgct gctggagtgt cccaagagag atgcaaagtg tctgaatttt 1860
ctgactcttc ccgtcagaac ccccaaagac acacgtgacc caccaccccc tctctgacca 1920
tgaggccacc ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg 1980
gcagcgggat ggggaggacc agacccagga caccgagctt gtggagacca ggccagcagg 2040
agatggaacc ttccagaagt gggcagctgt ggtggtgcct tctggacaag agcagagata 2100
cacgtgccat atgcagcacg aggggctgca agagcccctc accctgagct ggggtaagga 2160
ggggaatggg gggtcacatc tcttatcaga gaaagcagaa gtccttctgg agcccttcag 2220
ccgggtcagg gctgaggctt gggggtcagg gcccctcacc ttctcctcct ttcccagagc 2280
catcttccca gcccaccatc cccatcatgg gcatcgttgc tggcctggct gtcctggttg 2340
tcctagctgt ccttggagct gtggtcaccg ctatgatgtg taggaggaag agctcaggta 2400
gggaaggggt gaagagcggg gtctgggttt tcttgtccca ctgggagttt caagccccag 2460
gtagaagtgt gccccgcctt gttactggaa gcaccatcca cacatgggcc atcccagcct 2520
gggaccctgt gtgccagcac ttactctttt gtgaagcaca tgtgacaatg aaggacggat 2580
gtatcacctt gatgattatg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2640
ggtccctgct aaggacagac cttaggaggg cagttggtcc agaacccaca actgctttcc 2700
ccatgtttcc tgatcctgcc ctgggtctgc agtcgtagtt ctggaaactt ctcttgggtc 2760
caagactagg aggttcccct aagatcacat ggccctgcct cctcccagtc ccctcatagg 2820
gcattttctt cccacaggtg gaaaaggagg gagctgctct caggctgcgt gtaagtgatg 2880
gcggcgggcg tgtggaggag ctcacctact ccataattcc tcttgtccca catctcctgc 2940
gggctctgac caggtctttt tttt 2964
//