Dbfetch
ID MK796846; SV 1; linear; genomic DNA; STD; HUM; 1693 BP.
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AC MK796846;
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DT 14-NOV-2019 (Rel. 142, Created)
DT 14-NOV-2019 (Rel. 142, Last updated, Version 1)
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DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*25 allele, partial
DE cds.
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KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
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RN [1]
RP 1-1693
RA Tsamadou C., Furst D., Neuchel C., Mytilineos J.;
RT "A new HLA-A*25:01 variant";
RL Unpublished.
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RN [2]
RP 1-1693
RA Tsamadou C., Furst D., Neuchel C., Mytilineos J.;
RT ;
RL Submitted (17-APR-2019) to the INSDC.
RL Transplantation Immunologie, IKT Ulm, Helmholtzstrasse 10, Ulm 89081,
RL Germany
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DR MD5; 00c0d4641651e16fca84920841e6506d.
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CC ##Assembly-Data-START##
CC Sequencing Technology :: Sanger dideoxy sequencing
CC ##Assembly-Data-END##
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FH Key Location/Qualifiers
FH
FT source 1..1693
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>1693
FT /gene="HLA-A"
FT /allele="HLA-A*25"
FT mRNA join(<1..73,174..443,544..819,920..1195,1296..1412,
FT 1513..1545,1646..>1693)
FT /gene="HLA-A"
FT /allele="HLA-A*25"
FT /product="MHC class I antigen"
FT CDS join(1..73,174..443,544..819,920..1195,1296..1412,
FT 1513..1545,1646..>1693)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*25"
FT /product="MHC class I antigen"
FT /protein_id="QGA28425.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRESLRI
FT ALRYYNQSEDSSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA
FT AQITQRKWETAHEAEQWRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDMSLTACK"
FT gap 74..173
FT /estimated_length=unknown
FT gap 444..543
FT /estimated_length=unknown
FT gap 820..919
FT /estimated_length=unknown
FT gap 1196..1295
FT /estimated_length=unknown
FT gap 1413..1512
FT /estimated_length=unknown
FT gap 1546..1645
FT /estimated_length=unknown
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SQ Sequence 1693 BP; 216 A; 329 C; 369 G; 179 T; 600 other;
atggccgtca tggcgccccg aaccctcgtc ctgctactct cgggggccct ggccctgacc 60
cagacctggg cggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 120
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngctccca 180
ctccatgagg tatttctaca cctccgtgtc ccggcccggc cgcggggagc cccgcttcat 240
cgccgtgggc tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca 300
gaggatggag ccgcgggcgc cgtggataga gcaggagggg ccggagtatt gggaccggaa 360
cacacggaat gtgaaggccc actcacagac tgaccgagag agcctgcgga tcgcgctccg 420
ctactacaac cagagcgagg acannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540
nnngttctca caccatccag aggatgtatg gctgcgacgt ggggccggac gggcgcttcc 600
tccgcgggta ccagcaggac gcttacgacg gcaaggatta catcgccctg aacgaggacc 660
tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag tgggagacgg 720
cccatgaggc ggagcagtgg agagcctacc tggagggccg gtgcgtggag tggctccgca 780
gatacctgga gaacgggaag gagacgctgc agcgcacggn nnnnnnnnnn nnnnnnnnnn 840
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900
nnnnnnnnnn nnnnnnnnna cgcccccaag acgcatatga ctcaccacgc tgtctctgac 960
catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat cacactgacc 1020
tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac caggcctgca 1080
ggggatggga ccttccagaa gtgggcgtct gtggtggtgc cttctggaca ggagcagaga 1140
tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag atgggnnnnn 1200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagccg tcttcccagc ccaccatccc 1320
catcgtgggc atcattgctg gcctggttct ctttggagct gtgatcgctg gagctgtggt 1380
cgctgctgtg atgtggagga ggaagagctc agnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500
nnnnnnnnnn nnatagaaaa ggagggagct actctcaggc tgcaannnnn nnnnnnnnnn 1560
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620
nnnnnnnnnn nnnnnnnnnn nnnnngcagt gacagtgccc agggctctga tatgtctctc 1680
acagcttgta aag 1693
//