Dbfetch

ID   MK784063; SV 1; linear; genomic DNA; STD; HUM; 4774 BP.
XX
AC   MK784063;
XX
DT   30-OCT-2019 (Rel. 142, Created)
DT   30-OCT-2019 (Rel. 142, Last updated, Version 1)
XX
DE   Homo sapiens isolate Han6 MHC class II antigen (HLA-DPA1) gene,
DE   HLA-DPA1*02var allele, exons 1 through 4 and partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-4774
RA   Wang Y.;
RT   ;
RL   Submitted (10-APR-2019) to the INSDC.
RL   Institute of Medical Biology, Chinese Academy of Medical Sciences,
RL   Jiaolinglu, Kunming 650106, China
XX
DR   MD5; 58719ff31ac843f4370c4dc0589d754f.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: NGSengine v. 2.9.0.10412
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4774
FT                   /organism="Homo sapiens"
FT                   /isolate="Han6"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>4774
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT   mRNA            join(<1..41,3608..3853,4194..4475,4690..>4774)
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..41,3608..3853,4194..4475,4690..>4774)
FT                   /codon_start=2
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QFS18982.1"
FT                   /translation="AFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYV
FT                   DLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFP
FT                   KEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLT
FT                   FVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGI"
FT   exon            <1..41
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=1
FT                   /note="DPA1"
FT   intron          42..3607
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=1
FT                   /note="DPA1"
FT   exon            3608..3853
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=2
FT                   /note="DPA1"
FT   intron          3854..4193
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=2
FT                   /note="DPA1"
FT   exon            4194..4475
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=3
FT                   /note="DPA1"
FT   intron          4476..4689
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=3
FT                   /note="DPA1"
FT   exon            4690..>4774
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02var"
FT                   /number=4
FT                   /note="DPA1"
XX
SQ   Sequence 4774 BP; 1252 A; 1142 C; 908 G; 1472 T; 0 other;
     ggctttcctg ctgagtctcc gaggagctgg ggccatcaag ggtgagtgct caggaggacg        60
     caagagcgtc ggggtgagtg atggggtggt tcacatcaat tgttgcttca ggaatcacag       120
     attttagggg ctcattgatc tatctggtcc tcatagtcta tgttccctct ggccctcata       180
     ataataacag caataacagc cagaatttat gagacgcctg catagtttct ttccccattt       240
     acatctcaca ggaaccttca atgaagataa tattccattc atttagaaat tattcctttt       300
     atttagaaat tattttgaaa aaactgaagc tcaaaaagat gaataagttt tccaaggtta       360
     cacagcagat caacgagcca agtttgaagt ccagacccag ctctgagggt cgtacactgc       420
     cttccccaga ttcctgcaca cagtgaccta ctaccagggc cctcctatct ctctgggatc       480
     cccagcctct gtcttttgtg gctgcttcac aggaactccg agctatggac tctgcattag       540
     gagaggaagt gcgaagagtg tttctgtatc ctctctctct tctaggaccc tagggctctt       600
     cctgggtctt tgtgggtggt cacaagcttt cctctctcaa gacagcaggg ttgcatggtc       660
     ttgatagcct tgtgattcgg gttctgagag atccaggact gcaagggagg cctagacttt       720
     tgatagctgc aaggactcag ccagagatgg accgtagtga atgctccttt ttcctgtagc       780
     tgaaatcagg gagaatgaca tcaagcctgt gcatgatgct gtcattccaa aatctagtga       840
     tggggaaggt tagaatccat aacgtacaag atgcacactg gcttcagaca gttttattta       900
     agatgtgtag aataaagagg aggtcaggct gggtagaacc agaagtatct attgccctgt       960
     tcgcggtcac ctgagttatt tttaatgtta tgttataata aacaccacaa taggcttctc      1020
     ttcatagatg caaatacttt ttagtattct tggtagaaat tcctaatgag ctcagctgtc      1080
     tcttcagggc ttccctgccc agtggttcct tgtctcttaa catttaaaca tgtaatttac      1140
     cttaaaaaca taagtgcaaa tcaactgata aaaaacaacc ttgccttcag tctgcatcct      1200
     atcccagaga cactttcttt gtgtcctcac acgtggagct aagcttctga cttgtctctg      1260
     gtacatccct gaggatcctc tcatcttggc catcaggaac ctctacagaa ggtcaaatcc      1320
     agtgggttct tctcagtgcc cctgacttga gttactaata acatttgcac tgtaatccac      1380
     ttctttctga tgaactaccg tgtccttatt tttctcctgt ttacctggat cctccttatc      1440
     atcctttaaa tcacctctta attatcatgt tctctcatta taccctgaga tctcagcaat      1500
     tctgattttt ggcactcttc ctggaaaatc tcatttaacc tgtgcctgcc actaatgact      1560
     ctcagttctc tggcctaaac tcctctcctg agaccaccca taatccacaa atgtctatgt      1620
     attatttctc cttagatgac tttcaggtct tctaagtgca atagccccac agtgaactca      1680
     gtatcttctc ccagtcaggc tgtcttcccc ctgagagaag tggcttttgc cctgttttct      1740
     gaatgcctac attgaagcca tctgttcccc aggaagcctt ccctgatgtg ctgcttgatc      1800
     gcatcttgtg tatacccacg tatctgcact tatccttctg aacctgctgt tgtcttgtca      1860
     cttgtgtttc cttctgtgac ttatacgcgt ctgcacaaca ggacgtatgt attattttta      1920
     tttgagtatt tagcatctaa cagtgtttga catatagtag tcttttaata catatttttg      1980
     tctgaatgga aatgatattt tgaagtaaaa taatctgttc catagctggc tgatctttgg      2040
     actgcagaac ttgtgaaagt gttttttaaa aagcatttta aaaagtacaa gggacattca      2100
     tgtattaaga agatgagttt tcaataactg ctagaggact ttgtgtcttt ttatattacc      2160
     ctctttttcc tgatgagtcc tttgagtcct ttaaactgag gagcaagcta agtttcctag      2220
     tgaaatacct ataggatttg ttttgtttag tttcaaatac cactctttgc ttggccactt      2280
     actgtgtcag ggagtcattc tcagtgaaaa ataagacaca gatcataccc tctagacact      2340
     tacaattaca gtgacaagga gtcattctcc tgtccccaca tgtcagggct gaaaactcac      2400
     agggaaatcc gtgagttggg aagtgagagc agaagagctc catagttcct tctcactctg      2460
     atgcatttat cattctaaac ccagactttc acatacacat tcatcatttt ctttcatgat      2520
     aatagttgct tttatcctct tatctttgct aattcttaca aactaataaa gactaagaaa      2580
     caaaataaat taaatcctac aggtgttcca aactcagcaa taatttctag ttggcctcta      2640
     aaacaaaaat caaaatataa atgtaagaaa agttcagaat gcttagtacc tgcgtgatga      2700
     aataatctgt acactaaacc cccgaatcat gagtttacct atacaacaaa cctgcacatg      2760
     tactcctgaa cataaaataa atgttgaaat atttttaaaa aggaaacaaa agtttggaac      2820
     aaatgccaaa ataactgtac tgtacttttg aatttatatg ccccaaatga aaaatattat      2880
     caacaaagct atacattcta cattttcatg ttcataaact aagacagaaa ctttaaaact      2940
     gtcaagagca ctaaaatttg aaggatattt tcttcttcct ctcaatttcg tatttttttc      3000
     taccttttct ataataagaa aaagaaaatg tccactctcc caaccccacg actctaaaaa      3060
     caattttaca tctgtgtcct agaagaatta agaacttaat gggatagaaa acctctctac      3120
     tagttccacc agtagccgta tgaccttagc aagttattaa tatgtaactt ccctgcattt      3180
     ccttacctgt aaaatgtatg atatgtattt gcttcataaa gttattgtga caattcaacg      3240
     agtgaatatg taaagtattt agaaggatgc ctggcacaac taagtgctca acaaatgtta      3300
     gctgtcattg ttactattac tattgtgtag ggtcaggatg cccagacttt caaagaccag      3360
     gaagcagctt gacttatcaa tgataaactt tttattttgt tcttcactcc tttcttttta      3420
     taactgctca tctgctctgt attatttcct ttatggtgtt gctccttctt cttccccata      3480
     tgtccttcct ttgacctctt actttcttcc tttttatatt cataagtctt tattcattct      3540
     ctagctttga ccacttgcat attcaaactg acattttgtc atgtttttct ctactttctt      3600
     tatgcagcgg accatgtgtc aacttatgcc atgtttgtac agacccatag accaacagga      3660
     gagtttatgt ttgaatttga tgaagatgag cagttctatg tggatctgga caagaaggag      3720
     accgtctggc atctggagga gtttggccga gccttttcct ttgaggctca gggcgggctg      3780
     gctaacattg ctatattgaa caacaacttg aataccttga tccagcgttc caaccacact      3840
     caggccgcca atggtactgc ctatctttgc ctcttcctct gtagcccaac tggaagggat      3900
     gagagggcct ctctgccacc ctcagactag gaagcctaag tgccccctgc tgtgtgatcc      3960
     tcttccacta gtggccgtgg gctgatccca ccacagcaag ggctttcatc ctctcttctc      4020
     aggagagaga aaggtgagca gagtgaggct ggtcagtggt gtgatacccc tctctgtgat      4080
     tcacagctgc cataaaatct aaggctgagg tagaggacca ccctccccca agaggtggag      4140
     cctttgtgat tcatcccaga agagggacct aacctggtgc tgtctcctcc tagatccccc      4200
     tgaggtgacg gtgtttccca aggagcctgt ggagctgggc cagcccaaca ccctcatctg      4260
     ccacattgac aggttcttcc caccagtgct caatgtcaca tggctgtgca atggggagcc      4320
     ggtcactgag ggtgtcgctg agagcctctt cctgcccaga acagattaca gcttccacaa      4380
     gttccattac ctgacctttg tgccctcagc agaggacgtc tatgactgca gggtggagca      4440
     ctggggcttg gaccagccgc tcctcaagca ctgggatatg caactgcttt tctctccata      4500
     atctcctggc atcctctatt ccaaagacct ggtgtcctct gcaccagctt tccccactgg      4560
     ccaggtctca gtcctctcct cgtcctaaca tccaattaac tggtccataa ccttcaattc      4620
     ccacaaccat cccaggccag aaccaccctc actacacctc ctgaccctat ctcttcattc      4680
     ttcccccaga ggcccaagag ccaatccaga tgcctgagac aacggagact gtgctctgtg      4740
     ccctgggcct ggtgctgggc ctagtgggca tcat                                  4774
//