Dbfetch
ID MK784063; SV 1; linear; genomic DNA; STD; HUM; 4774 BP.
XX
AC MK784063;
XX
DT 30-OCT-2019 (Rel. 142, Created)
DT 30-OCT-2019 (Rel. 142, Last updated, Version 1)
XX
DE Homo sapiens isolate Han6 MHC class II antigen (HLA-DPA1) gene,
DE HLA-DPA1*02var allele, exons 1 through 4 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-4774
RA Wang Y.;
RT ;
RL Submitted (10-APR-2019) to the INSDC.
RL Institute of Medical Biology, Chinese Academy of Medical Sciences,
RL Jiaolinglu, Kunming 650106, China
XX
DR MD5; 58719ff31ac843f4370c4dc0589d754f.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: NGSengine v. 2.9.0.10412
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..4774
FT /organism="Homo sapiens"
FT /isolate="Han6"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>4774
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT mRNA join(<1..41,3608..3853,4194..4475,4690..>4774)
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /product="MHC class II antigen"
FT CDS join(<1..41,3608..3853,4194..4475,4690..>4774)
FT /codon_start=2
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /product="MHC class II antigen"
FT /protein_id="QFS18982.1"
FT /translation="AFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYV
FT DLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFP
FT KEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLT
FT FVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGI"
FT exon <1..41
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=1
FT /note="DPA1"
FT intron 42..3607
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=1
FT /note="DPA1"
FT exon 3608..3853
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=2
FT /note="DPA1"
FT intron 3854..4193
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=2
FT /note="DPA1"
FT exon 4194..4475
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=3
FT /note="DPA1"
FT intron 4476..4689
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=3
FT /note="DPA1"
FT exon 4690..>4774
FT /gene="HLA-DPA1"
FT /allele="HLA-DPA1*02var"
FT /number=4
FT /note="DPA1"
XX
SQ Sequence 4774 BP; 1252 A; 1142 C; 908 G; 1472 T; 0 other;
ggctttcctg ctgagtctcc gaggagctgg ggccatcaag ggtgagtgct caggaggacg 60
caagagcgtc ggggtgagtg atggggtggt tcacatcaat tgttgcttca ggaatcacag 120
attttagggg ctcattgatc tatctggtcc tcatagtcta tgttccctct ggccctcata 180
ataataacag caataacagc cagaatttat gagacgcctg catagtttct ttccccattt 240
acatctcaca ggaaccttca atgaagataa tattccattc atttagaaat tattcctttt 300
atttagaaat tattttgaaa aaactgaagc tcaaaaagat gaataagttt tccaaggtta 360
cacagcagat caacgagcca agtttgaagt ccagacccag ctctgagggt cgtacactgc 420
cttccccaga ttcctgcaca cagtgaccta ctaccagggc cctcctatct ctctgggatc 480
cccagcctct gtcttttgtg gctgcttcac aggaactccg agctatggac tctgcattag 540
gagaggaagt gcgaagagtg tttctgtatc ctctctctct tctaggaccc tagggctctt 600
cctgggtctt tgtgggtggt cacaagcttt cctctctcaa gacagcaggg ttgcatggtc 660
ttgatagcct tgtgattcgg gttctgagag atccaggact gcaagggagg cctagacttt 720
tgatagctgc aaggactcag ccagagatgg accgtagtga atgctccttt ttcctgtagc 780
tgaaatcagg gagaatgaca tcaagcctgt gcatgatgct gtcattccaa aatctagtga 840
tggggaaggt tagaatccat aacgtacaag atgcacactg gcttcagaca gttttattta 900
agatgtgtag aataaagagg aggtcaggct gggtagaacc agaagtatct attgccctgt 960
tcgcggtcac ctgagttatt tttaatgtta tgttataata aacaccacaa taggcttctc 1020
ttcatagatg caaatacttt ttagtattct tggtagaaat tcctaatgag ctcagctgtc 1080
tcttcagggc ttccctgccc agtggttcct tgtctcttaa catttaaaca tgtaatttac 1140
cttaaaaaca taagtgcaaa tcaactgata aaaaacaacc ttgccttcag tctgcatcct 1200
atcccagaga cactttcttt gtgtcctcac acgtggagct aagcttctga cttgtctctg 1260
gtacatccct gaggatcctc tcatcttggc catcaggaac ctctacagaa ggtcaaatcc 1320
agtgggttct tctcagtgcc cctgacttga gttactaata acatttgcac tgtaatccac 1380
ttctttctga tgaactaccg tgtccttatt tttctcctgt ttacctggat cctccttatc 1440
atcctttaaa tcacctctta attatcatgt tctctcatta taccctgaga tctcagcaat 1500
tctgattttt ggcactcttc ctggaaaatc tcatttaacc tgtgcctgcc actaatgact 1560
ctcagttctc tggcctaaac tcctctcctg agaccaccca taatccacaa atgtctatgt 1620
attatttctc cttagatgac tttcaggtct tctaagtgca atagccccac agtgaactca 1680
gtatcttctc ccagtcaggc tgtcttcccc ctgagagaag tggcttttgc cctgttttct 1740
gaatgcctac attgaagcca tctgttcccc aggaagcctt ccctgatgtg ctgcttgatc 1800
gcatcttgtg tatacccacg tatctgcact tatccttctg aacctgctgt tgtcttgtca 1860
cttgtgtttc cttctgtgac ttatacgcgt ctgcacaaca ggacgtatgt attattttta 1920
tttgagtatt tagcatctaa cagtgtttga catatagtag tcttttaata catatttttg 1980
tctgaatgga aatgatattt tgaagtaaaa taatctgttc catagctggc tgatctttgg 2040
actgcagaac ttgtgaaagt gttttttaaa aagcatttta aaaagtacaa gggacattca 2100
tgtattaaga agatgagttt tcaataactg ctagaggact ttgtgtcttt ttatattacc 2160
ctctttttcc tgatgagtcc tttgagtcct ttaaactgag gagcaagcta agtttcctag 2220
tgaaatacct ataggatttg ttttgtttag tttcaaatac cactctttgc ttggccactt 2280
actgtgtcag ggagtcattc tcagtgaaaa ataagacaca gatcataccc tctagacact 2340
tacaattaca gtgacaagga gtcattctcc tgtccccaca tgtcagggct gaaaactcac 2400
agggaaatcc gtgagttggg aagtgagagc agaagagctc catagttcct tctcactctg 2460
atgcatttat cattctaaac ccagactttc acatacacat tcatcatttt ctttcatgat 2520
aatagttgct tttatcctct tatctttgct aattcttaca aactaataaa gactaagaaa 2580
caaaataaat taaatcctac aggtgttcca aactcagcaa taatttctag ttggcctcta 2640
aaacaaaaat caaaatataa atgtaagaaa agttcagaat gcttagtacc tgcgtgatga 2700
aataatctgt acactaaacc cccgaatcat gagtttacct atacaacaaa cctgcacatg 2760
tactcctgaa cataaaataa atgttgaaat atttttaaaa aggaaacaaa agtttggaac 2820
aaatgccaaa ataactgtac tgtacttttg aatttatatg ccccaaatga aaaatattat 2880
caacaaagct atacattcta cattttcatg ttcataaact aagacagaaa ctttaaaact 2940
gtcaagagca ctaaaatttg aaggatattt tcttcttcct ctcaatttcg tatttttttc 3000
taccttttct ataataagaa aaagaaaatg tccactctcc caaccccacg actctaaaaa 3060
caattttaca tctgtgtcct agaagaatta agaacttaat gggatagaaa acctctctac 3120
tagttccacc agtagccgta tgaccttagc aagttattaa tatgtaactt ccctgcattt 3180
ccttacctgt aaaatgtatg atatgtattt gcttcataaa gttattgtga caattcaacg 3240
agtgaatatg taaagtattt agaaggatgc ctggcacaac taagtgctca acaaatgtta 3300
gctgtcattg ttactattac tattgtgtag ggtcaggatg cccagacttt caaagaccag 3360
gaagcagctt gacttatcaa tgataaactt tttattttgt tcttcactcc tttcttttta 3420
taactgctca tctgctctgt attatttcct ttatggtgtt gctccttctt cttccccata 3480
tgtccttcct ttgacctctt actttcttcc tttttatatt cataagtctt tattcattct 3540
ctagctttga ccacttgcat attcaaactg acattttgtc atgtttttct ctactttctt 3600
tatgcagcgg accatgtgtc aacttatgcc atgtttgtac agacccatag accaacagga 3660
gagtttatgt ttgaatttga tgaagatgag cagttctatg tggatctgga caagaaggag 3720
accgtctggc atctggagga gtttggccga gccttttcct ttgaggctca gggcgggctg 3780
gctaacattg ctatattgaa caacaacttg aataccttga tccagcgttc caaccacact 3840
caggccgcca atggtactgc ctatctttgc ctcttcctct gtagcccaac tggaagggat 3900
gagagggcct ctctgccacc ctcagactag gaagcctaag tgccccctgc tgtgtgatcc 3960
tcttccacta gtggccgtgg gctgatccca ccacagcaag ggctttcatc ctctcttctc 4020
aggagagaga aaggtgagca gagtgaggct ggtcagtggt gtgatacccc tctctgtgat 4080
tcacagctgc cataaaatct aaggctgagg tagaggacca ccctccccca agaggtggag 4140
cctttgtgat tcatcccaga agagggacct aacctggtgc tgtctcctcc tagatccccc 4200
tgaggtgacg gtgtttccca aggagcctgt ggagctgggc cagcccaaca ccctcatctg 4260
ccacattgac aggttcttcc caccagtgct caatgtcaca tggctgtgca atggggagcc 4320
ggtcactgag ggtgtcgctg agagcctctt cctgcccaga acagattaca gcttccacaa 4380
gttccattac ctgacctttg tgccctcagc agaggacgtc tatgactgca gggtggagca 4440
ctggggcttg gaccagccgc tcctcaagca ctgggatatg caactgcttt tctctccata 4500
atctcctggc atcctctatt ccaaagacct ggtgtcctct gcaccagctt tccccactgg 4560
ccaggtctca gtcctctcct cgtcctaaca tccaattaac tggtccataa ccttcaattc 4620
ccacaaccat cccaggccag aaccaccctc actacacctc ctgaccctat ctcttcattc 4680
ttcccccaga ggcccaagag ccaatccaga tgcctgagac aacggagact gtgctctgtg 4740
ccctgggcct ggtgctgggc ctagtgggca tcat 4774
//