Dbfetch
ID MK780762; SV 1; linear; genomic DNA; STD; HUM; 2965 BP. XX AC MK780762; XX DT 09-JUN-2019 (Rel. 141, Created) DT 09-JUN-2019 (Rel. 141, Last updated, Version 1) XX DE Homo sapiens HLA class I histocompatibility antigen (HLA-B) gene, DE HLA-B*18:06 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2965 RA Lazaro A., Hou L., Desphy M.A.; RT ; RL Submitted (09-APR-2019) to the INSDC. RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852, RL USA XX DR MD5; 7632abf48f62231b981063a291d8760d. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign Tru Sight v. HLA 2.1; GenDex v. CC V2.11.0.11444; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2965 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT02240" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <269..>2954 FT /gene="HLA-B" FT /allele="HLA-B*18:06" FT mRNA join(<269..341,470..739,986..1261,1834..2109,2214..2330, FT 2772..2804,2911..>2954) FT /gene="HLA-B" FT /allele="HLA-B*18:06" FT /product="HLA class I histocompatibility antigen" FT CDS join(269..341,470..739,986..1261,1834..2109,2214..2330, FT 2772..2804,2911..2954) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*18:06" FT /product="HLA class I histocompatibility antigen" FT /db_xref="GOA:A0A4D6P091" FT /db_xref="UniProtKB/TrEMBL:A0A4D6P091" FT /protein_id="QCW64095.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FISVGYVDGTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQISKTNTQTYRVSLRN FT LRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 2965 BP; 547 A; 899 C; 926 G; 593 T; 0 other; caggccccgg gcggggctct cagggtctca ggctccgaga gccttgtctg cattggggag 60 gcgcagcatt ggggattccc cactcccacg agtttcactt cttctcccaa cctatgtcgg 120 gtccttcttc caggatactc gtgacgcgtc cccatttccc actcccattg ggtgtcgggt 180 gtctagagaa gccaatcagt gtcgccgggg tcccagttct aaagtcccca cgcacccacc 240 cggactcaga atctcctcag acgccgagat gcgggtcacg gcgccccgaa ccctcctcct 300 gctgctctgg ggggcagtgg ccctgaccga gacctgggct ggtgagtgcg gggtcggcag 360 ggaaatggcc tctgtgggga ggagcgaggg gaccgcaggc gggggcgcag gacccgggga 420 gccgcgccgg gaggagggtc gggcgggtct cagcccctcc ttgccccagg ctcccactcc 480 atgaggtatt tccacacctc cgtgtcccgg cccggccgcg gggagccccg cttcatctca 540 gtgggctacg tggacggcac ccagttcgtg aggttcgaca gcgacgccgc gagtccgagg 600 acggagcccc gggcgccgtg gatagagcaa gaggggccgg agtattggga ccggaacaca 660 cagatctcca agaccaacac acagacttac cgagtgagcc tgcggaacct gcgcggctac 720 tacaaccaga gcgaggccgg tgagtgaccc cggcccgggg cgcaggtcac gactccccat 780 cccccacgta cggcccgggt cgccccgagt ctccgggtcc gagatccgcc cccctgaggc 840 cgcgggaccc gcccagaccc tcgaccggcg agagccccag gcgcgtttac ccggtttcat 900 tttcagttga ggccaaaatc cccgcgggtt ggtcggggcg gggcggggct cggggggacg 960 gggctgaccg cggggccggg gccagggtct cacaccctcc agaggatgta cggctgcgac 1020 gtggggccgg acgggcgcct cctccgcggg catgaccagt ccgcctacga cggcaaggat 1080 tacatcgccc tgaacgagga cctgagctcc tggaccgcgg cggacaccgc ggctcagatc 1140 acccagcgca agtgggaggc ggcccgtgtg gcggagcagc tgagagccta cctggagggc 1200 acgtgcgtgg agtggctccg cagacacctg gagaacggga aggagacgct gcagcgcgcg 1260 ggtaccaggg gcagtgggga gccttcccca tctcctatag gtcgccgggg atggcctccc 1320 acgagaagag gaggaaaatg ggatcagcgc tagaatgtcg ccctcccttg aatggagaat 1380 ggcatgagtt ttcccgagtt tcctctgagg gccccctctt ctctctagga caattaaggg 1440 atgacgtctc tgaggaaatg gaggggaaga cagtccctag aatactgatc aggggtcccc 1500 tttgacccct gcagcagcct tgggaaccat gacttttcct ctcaggcctt gttctctgcc 1560 tcacactcag tgtgtttggg gctctgattc cagcacttct gagtcacttt acctccactc 1620 agatcaggag cagaagtctc tgttccccgc tcagagactc gaactttcca atgaatagat 1680 tatcccaggt gcctgcgtcc aggctggtgt ctgggttctg tgccccttcc ccaccccagg 1740 tgtcctgtcc attctcaggc tggtcacatg ggtggtccta gggtgtccca tgagagatgc 1800 aaagcgcctg aattttctga ctcttcccat cagacccccc aaagacacat gtgacccacc 1860 accccatctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc taccctgcgg 1920 agatcacact gacctggcag cgggatggcg aggaccaaac tcaggacacc gagcttgtgg 1980 agaccagacc agcaggagat agaaccttcc agaagtgggc agctgtggtg gtgccttctg 2040 gagaagagca gagatacaca tgccatgtac agcatgaggg gctgccgaag cccctcaccc 2100 tgagatgggg taaggagggg gatgaggggt catatctctt ctcagggaaa gcaggagccc 2160 ttctggagcc cttcagcagg gtcagggccc ctcatcttcc cctcctttcc cagagccatc 2220 ttcccagtcc accatcccca tcgtgggcat tgttgctggc ctggctgtcc tagcagttgt 2280 ggtcatcgga gctgtggtcg ctactgtgat gtgtaggagg aagagctcag gtagggaagg 2340 ggtgaggggt ggggtctggg ttttcttgtc ccactggggg tttcaagccc caggtagaag 2400 tgttccctgc ctcattactg ggaagcagca tccacacagg ggctaacgca gcctgggacc 2460 ctgtgtgcca gcacttactc ttttgtgcag cacatgtgac aatgaaggac ggatgtatca 2520 ccttgatggt tgtggtgttg gggtcctgat tccagcattc atgagtcagg ggaaggtccc 2580 tgctaaggac agaccttagg agggcagttg gtccaggacc cacacttgct ttcctcgtgt 2640 ttcctgatcc tgccttgggt ctgtagtcat acttctggaa attccttttg gttccaagac 2700 gaggaggttc ctctaagatc tcatggccct gcttcctccc agtcccctca caggacattt 2760 tcttcccaca ggtggaaaag gagggagcta ctctcaggct gcgtgtaagt ggtgggggtg 2820 ggagtgtgga ggagctcacc caccccataa ttcctcctgt cccacgtctc ctgcgggctc 2880 tgaccaggtc ctgtttttgt tctactccag ccagcgacag tgcccagggc tctgatgtgt 2940 ctctcacagc ttgaaaaggt gagat 2965 //