Dbfetch

Dbfetch

ID   MK442248; SV 1; linear; genomic DNA; STD; HUM; 886 BP.
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AC   MK442248;
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DT   27-FEB-2020 (Rel. 143, Created)
DT   27-FEB-2020 (Rel. 143, Last updated, Version 1)
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DE   Homo sapiens clone DQA1_112273_00055 MHC class II antigen (HLA-DQA1) gene,
DE   exons 2 through 4 and partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-886
RA   Cereb N., Yang S.Y.;
RT   "HLA new alleles found by Histogenetics";
RL   Unpublished.
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RN   [2]
RP   1-886
RA   Cereb N., Yang S.Y.;
RT   ;
RL   Submitted (23-JAN-2019) to the INSDC.
RL   Histogenetics, 300 Executive Blvd, Ossining, NY 10562, USA
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DR   MD5; cae7d7015d826eae0ccff3ba9fd0070f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..886
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="DQA1_112273_00055"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>886
FT                   /gene="HLA-DQA1"
FT   mRNA            join(<1..249,350..631,732..>886)
FT                   /gene="HLA-DQA1"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..249,350..631,732..886)
FT                   /codon_start=3
FT                   /gene="HLA-DQA1"
FT                   /product="MHC class II antigen"
FT                   /protein_id="QBQ84180.1"
FT                   /translation="DHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPE
FT                   FSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLI
FT                   CLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSEHSFFKISYLTFLPSADEIYDCKV
FT                   EHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVGASR
FT                   HQGPL"
FT   exon            1..249
FT                   /gene="HLA-DQA1"
FT                   /number=2
FT   gap             250..349
FT                   /estimated_length=100
FT   exon            350..631
FT                   /gene="HLA-DQA1"
FT                   /number=3
FT   gap             632..731
FT                   /estimated_length=100
FT   exon            732..886
FT                   /gene="HLA-DQA1"
FT                   /number=4
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SQ   Sequence 886 BP; 150 A; 180 C; 177 G; 179 T; 200 other;
     ctgaccacgt tgcctcttgt ggtgtaaact tgtaccagtt ttacggtccc tctggccagt        60
     acacccatga atttgatgga gatgagcagt tctacgtgga cctggagagg aaggagactg       120
     cctggcggtg gcctgagttc agcaaatttg gaggttttga cccgcagggt gcactgagaa       180
     acatggctgt ggcaaaacac aacttgaaca tcatgattaa acgctacaac tctaccgctg       240
     ctaccaatgn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna ggttcctgag       360
     gtcacagtgt tttccaagtc tcccgtgaca ctgggtcagc ccaacaccct catttgtctt       420
     gtggacaaca tctttcctcc tgtggtcaac atcacatggc tgagcaatgg gcagtcagtc       480
     acagaaggtg tttctgagac cagcttcctc tccaagagtg aacattcctt cttcaagatc       540
     agttacctca ccttcctccc ttctgctgat gagatttatg actgcaaggt ggagcactgg       600
     ggcctggacc agcctcttct gaaacactgg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nagcctgaga ttccagcccc tatgtcagag ctcacagaga ctgtggtctg       780
     tgccctgggg ttgtctgtgg gcctcatggg cattgtggtg ggcactgtct tcatcatcca       840
     aggcctgcgt tcagttggtg cttccagaca ccaagggcca ttgtga                      886
//