Dbfetch
ID MK118158; SV 1; linear; genomic DNA; STD; HUM; 1531 BP. XX AC MK118158; XX DT 24-MAY-2019 (Rel. 140, Created) DT 24-MAY-2019 (Rel. 140, Last updated, Version 1) XX DE Homo sapiens MHC class II antigen (DQA1) gene, DQA1*05:05:01:01 allele, DE exons 2 and 3 and partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1531 RA Gautreaux M.D., Kiger D.F., Ingram K.J., Weavil K.N.; RT ; RL Submitted (31-OCT-2018) to the INSDC. RL Pathology - HLA/Immunogenetics Laboratory, Wake Forest Baptist Health, RL Medical Center Blvd, Winston-Salem, NC 27157, United States XX DR MD5; f56c56b995d464b3f6a2eb308de5cd3a. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.11.0.11444 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1531 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>1531 FT /gene="DQA1" FT /allele="DQA1*05:05:01:01" FT mRNA join(<486..731,1144..>1425) FT /gene="DQA1" FT /allele="DQA1*05:05:01:01" FT /product="MHC class II antigen" FT CDS join(<486..731,1144..>1425) FT /codon_start=3 FT /gene="DQA1" FT /allele="DQA1*05:05:01:01" FT /product="MHC class II antigen" FT /note="MHC class II DQ alpha chain" FT /db_xref="GOA:A0A4P8PD65" FT /db_xref="UniProtKB/TrEMBL:A0A4P8PD65" FT /protein_id="QCQ78440.1" FT /translation="DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPV FT LRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILIC FT LVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVE FT HWGLDKPLLKHW" FT exon 486..731 FT /gene="DQA1" FT /allele="DQA1*05:05:01:01" FT /number=2 FT exon 1144..1425 FT /gene="DQA1" FT /allele="DQA1*05:05:01:01" FT /number=3 XX SQ Sequence 1531 BP; 416 A; 362 C; 307 G; 446 T; 0 other; aaagaaagac ctctgtgtag agtgtcctgt tctgagccag tcctgagagg aaagaaaata 60 caatcagttt gttattaact gaggaaagaa ttaagtgaaa gatgaatctt aggaagcaga 120 aggaagtaaa cctaatctct gactaagaaa gctaaatacc ataataactc attcattcct 180 tcttttgttt aattacatta tttaatcata agtccgtgat gtgccaggca ctcaggaaat 240 agtaaaaact ggacatgtga tattctgccc ttgtgtagcg cacattatag tgggaaagaa 300 agcgcaattt taaccggaca actaccaaca ataagagcgg aggaagcagg ggttggaaat 360 gtccacaggc tgtgccaaag atgaagcccg taatatttga aagtcagttt ctttcatcat 420 tttgtgtatt aaggttcttt cttcccctgt tctccacctt cctgcttgtc atcttcactc 480 atcagctgac cacgtcgcct cttatggtgt aaacttgtac cagtcttacg gtccctctgg 540 ccagtacacc catgaatttg atggagatga gcagttctac gtggacctgg ggaggaagga 600 gactgtctgg tgtttgcctg ttctcagaca atttagattt gacccgcaat ttgcactgac 660 aaacatcgct gtcctaaaac ataacttgaa cagtctgatt aaacgctcca actctaccgc 720 tgctaccaat ggtatgtgtc aacaattctg cccctcttta ctgatttatc ccttcatacc 780 aagtttcatt attttatttc caagaggtcc ccagatcttc tcatggcaat tgctgaaatt 840 ttatcatctc ccatctctaa aatcacatat tcccatgtaa tacaagggtc tttccattat 900 ccattcatta aatccttctc ggagaggtct catcaacctc ctactttatt aaacatgccc 960 acagagagaa gggcacagga ataaagcgga ggcaatgtgt cgttgctccc aagcagaagg 1020 taaataagac ctctttgact atcaggtggt gaaatgctgg taggagggct cttccaggat 1080 gtaatgcaga agctcatggc agagctattc acacttcaca tcagtgctgt ttcctcacca 1140 cagaggttcc tgaggtcaca gtgttttcca agtctcccgt gacactgggt cagcccaaca 1200 tcctcatctg tcttgtggac aacatctttc ctcctgtggt caacatcaca tggctgagca 1260 atgggcactc agtcacagaa ggtgtttctg agaccagctt cctctccaag agtgatcatt 1320 ccttcttcaa gatcagttac ctcaccctcc tcccttctgc tgaggagagt tatgactgca 1380 aggtggagca ctggggactg gacaagcctc ttctgaaaca ctggggtaag gatgagttcc 1440 accacttttt gatgctttct tgtctgtcaa gttcagaact tcctgccttt tactcctata 1500 tcccaaaact tgttttccac acttcatggg t 1531 //