Dbfetch
ID MH918667; SV 1; linear; genomic DNA; STD; HUM; 3544 BP. XX AC MH918667; XX DT 24-JAN-2019 (Rel. 139, Created) DT 31-JAN-2019 (Rel. 139, Last updated, Version 2) XX DE Homo sapiens MHC class I antigen (HLA-F) gene, HLA-F*01_01_01_09 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3544 RA Paganini J., Di Cristofaro J.; RT "Validation of new HLA-F alleles assigned by NGS"; RL Unpublished. XX RN [2] RP 1-3544 RA Paganini J., Di Cristofaro J.; RT ; RL Submitted (14-SEP-2018) to the INSDC. RL Biologie des Groupes Sanguins, Etablissement Francais du Sang PACA Corse, RL Faculte de Medecine 27, bd Jean Moulin, Marseille 13005, France XX DR MD5; ea8531dc5aea9bb4831cced203a662e0. XX CC ##Assembly-Data-START## CC Assembly Method :: Polypheme v. V1 CC Sequencing Technology :: Illumina; Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3544 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <301..>3244 FT /gene="HLA-F" FT /allele="HLA-F*01_01_01_09" FT mRNA join(<301..364,495..764,1010..1285,1868..2143,2284..2400, FT 2848..2880,3240..>3244) FT /gene="HLA-F" FT /allele="HLA-F*01_01_01_09" FT /product="MHC class I antigen" FT CDS join(301..364,495..764,1010..1285,1868..2143,2284..2400, FT 2848..2880,3240..3244) FT /codon_start=1 FT /gene="HLA-F" FT /allele="HLA-F*01_01_01_09" FT /product="MHC class I antigen" FT /db_xref="GOA:D0EV57" FT /db_xref="HGNC:HGNC:4963" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:D0EV57" FT /protein_id="AZS18892.1" FT /translation="MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIA FT VEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLR FT RYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQI FT TQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATL FT RCWALGFYPAEITLTWQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCH FT VQHEGLPQPLILRWEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGS FT YSQAAV" XX SQ Sequence 3544 BP; 731 A; 961 C; 1062 G; 790 T; 0 other; gggaggggga gggcaaagtc ccagggcccc aggagtggct ctcaagggct caggccccga 60 ggcggtgtct ggggttggga ggctcagtat tgagaattcc ccatctcccc agagtttctc 120 tttctctccc aacccgtgtc aggtccttct tcctggatac tcataacgcg gccccatttc 180 tcactcccat tgggcgtcgc gtttctagag aagccaatca gtgtcgccgc agttcccagg 240 ttctaaagtc ccacgcaccc cgcgggactc atatttttcc cagacgcgga ggttggggtc 300 atggcgcccc gaagcctcct cctgctgctc tcaggggccc tggccctgac cgatacttgg 360 gcgggtgagt gcggggtcca gagagaaacg gcctctgtgg ggaggagtga ggggcccgcc 420 cggtgggggc gcaggactca gggagccgcg cccggaggag ggtctggcgg gtctcagccc 480 ctcctcgccc ccaggctccc actccttgag gtatttcagc accgctgtgt cgcggcccgg 540 ccgcggggag ccccgctaca tcgccgtgga gtacgtagac gacacgcaat tcctgcggtt 600 cgacagcgac gccgcgattc cgaggatgga gccgcgggag ccgtgggtgg agcaagaggg 660 gccgcagtat tgggagtgga ccacagggta cgccaaggcc aacgcacaga ctgaccgagt 720 ggccctgagg aacctgctcc gccgctacaa ccagagcgag gctggtgagt gaacccggcc 780 gggggcgcag gtcacgacca ccccccatcc gccacggacc gcccgggtcc ctcagagtct 840 ccggatccga aatctacccc gaggcagcgg gacccgccca gaccctccac ccgggagagt 900 cccaggcgcc tttacccagg ttcattttca gtttaggcca aaatccccgc gggttgggcg 960 gggagggggc ggggctagct gggcggggct gactgcgggg accggctagg gtctcacacc 1020 ctccagggaa tgaatggctg cgacatgggg cccgacggac gcctcctccg cgggtatcac 1080 cagcacgcgt acgacggcaa ggattacatc tccctgaacg aggacctgcg ctcctggacc 1140 gcggcggaca ccgtggctca gatcacccag cgcttctatg aggcagagga atatgcagag 1200 gagttcagga cctacctgga gggcgagtgc ctggagttgc tccgcagata cttggagaat 1260 gggaaggaga cgctacagcg cgcaggtacc aggggccatg ggcgccttcc ctatctcctg 1320 tagatctctt gggatggcct cgcacaaggt tgggaggaaa gtgggcccaa tgctaggata 1380 tcgccctccc tctagtcctg agtaggaaga atcttcctgg ctttcgagat ccggtaccag 1440 agagtgactg tgagagtccg ccctgctctc tgggacaatt aagggatgaa atctctgagg 1500 gaatggaggg aagacagtcc ctggaatacc gatccgcggt cccctttgag ccctccaaca 1560 gccttgggcc ccgtgacttt tctctcaagt tttgttctct gcctcacact caatgtgttt 1620 ggggctctga ttccagtccc tcggcctcca cttaggtcag ggccagaagt ccctgctccc 1680 ccctcagaga ctcgaacttt ccaaggaata ggagattttc ccaggtgtct gtgtccaggc 1740 tggtgtctgg gttctgtgct cccttcccca ccccaggtgt cctgtccatt ctcaggttgg 1800 tcacatgggt gctgctgggg tttcccatga ggagtgcaaa gtgcctgaat tttctgactc 1860 ttctcagatc ctccaaaggc acacgttgcc caccacccca tctctgacca tgaggccacc 1920 ctgaggtgct gggccctggg cttctaccct gcggagatca cgctgacctg gcagcgggat 1980 ggggaggaac agacccagga cacagagctt gtggagacca ggcctgcagg ggatggaacc 2040 ttccagaagt gggccgctgt ggtggtgcct tctggagagg aacagagata cacatgccat 2100 gtgcagcacg aggggctgcc ccagcccctc atcctgagat ggggtaagga gggagatggg 2160 taaagagggg aacgaggggt catgtctttt ctcagggaaa gcaggagccc ttctggagct 2220 cttcagcagg gtcagggctg aggcctggag atcagggccc ctcaccttcc cttcctttcc 2280 cagagcagtc tccccagccc accatcccca tcgtgggcat cgttgctggc cttgttgtcc 2340 ttggagctgt ggtcactgga gctgtggtcg ctgctgtgat gtggaggaag aagagctcag 2400 gtaggaaggg gtgaggagtg gagtctgagt tttcttgtcc cactgggggt tgcaagcccc 2460 aagtagaagt gtgccctgcc tcattactgg gaagcaccat ccacactcat gggtctaccc 2520 agcctgggcc ctgtgtgcca gcacctactc atttgtaaag ctcctgtgaa aatgaaggac 2580 agattcttca cttcgatgat tatggtggtg atgggacctg atcccagcag tcacaaatca 2640 caggggaagg tccctgctga tgacagacct caggagggca gttggtccag gacccacatc 2700 tgctttcttc atatttcttg atcctgccct ggatctacag ttacactttt ctggaaactt 2760 ctctgggatc aaagactagg ggtttgctct aggaccttat ggccctgcct cctttctggc 2820 ctctcacagg acattttctt cccatagata gaaacagagg gagctactct caggctgcag 2880 gtaagatgaa ggaggctgat ccctgagatt gttgggatat tgtggtcagg agcctatgag 2940 ggagctcacc caccccacag ttcctctagc cacatctgtg ggctctgacc aggtcctgtt 3000 tttgttctac cccaatcact gacagtgctc agggctctgg ggtgtctctc acagctaata 3060 aaggtgacac tccagggcag gggccctgat gtgagtgggg tgttgggggg gaacagaggg 3120 gactcagctg tgctattggg tttctttgac ttggatgtct tgagcatgaa atgggctatt 3180 tagagtgtta cctctcactg tgactgatac gaatttgttc atgaatattt tctctatagt 3240 gtgagacagc ttccttgtgt gggactgaga agcaagatat caatgtagca gaattgcact 3300 tgtgcctcac gaacatacat aaattttaaa aataaagaat aaaaatatat ctttttatag 3360 atacaggtag atatgttttt atagcatgca cgtaaatgtg tgtgtgtgtg tgtgtgaaga 3420 gaaagagtga atagagagat taagattctt ttaatggtga aaagatatac atatatttgg 3480 aattagccag cttgactcag tttaggtgat cccaattttg gtggcaacaa ccaaagcatc 3540 gtag 3544 //