Dbfetch
ID MH845221; SV 1; linear; genomic DNA; STD; HUM; 3087 BP.
XX
AC MH845221;
XX
DT 09-NOV-2018 (Rel. 138, Created)
DT 09-NOV-2018 (Rel. 138, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*68var allele, complete
DE cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3087
RA Liu B.;
RT ;
RL Submitted (06-SEP-2018) to the INSDC.
RL Shandong Cancer Hospital and Institute, Jinan 250000, China
XX
DR MD5; e38e970644ff6e5197d7f2d3638ef61f.
XX
FH Key Location/Qualifiers
FH
FT source 1..3087
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene 1..3087
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT mRNA join(1..180,311..580,822..1097,1698..1973,2073..2189,
FT 2628..2660,2803..2850,3020..3087)
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /product="MHC class I antigen"
FT exon 1..180
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=1
FT 5'UTR 1..107
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT CDS join(108..180,311..580,822..1097,1698..1973,2073..2189,
FT 2628..2660,2803..2850,3020..3024)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /product="MHC class I antigen"
FT /db_xref="GOA:B1PKZ2"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:B1PKZ2"
FT /protein_id="AYK27413.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA
FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDVSLTACKV"
FT intron 181..310
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=1
FT exon 311..580
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=2
FT intron 581..821
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=2
FT exon 822..1097
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=3
FT intron 1098..1697
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=3
FT exon 1698..1973
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=4
FT intron 1974..2072
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=4
FT exon 2073..2189
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=5
FT intron 2190..2627
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=5
FT exon 2628..2660
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=6
FT intron 2661..2802
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=6
FT exon 2803..2850
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=7
FT intron 2851..3019
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=7
FT exon 3020..3087
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
FT /number=8
FT 3'UTR 3025..3087
FT /gene="HLA-A"
FT /allele="HLA-A*68var"
XX
SQ Sequence 3087 BP; 597 A; 883 C; 958 G; 649 T; 0 other;
tcccattggg tgtcgggttt ccagagaagc caatcagtgt cgtcgcggtc gcggttctaa 60
agtccgcacg cacccaccgg gactcagatt ctccccagac gccgaggatg gccgtcatgg 120
cgccccgaac cctcgtcctg ctactctcgg gggccctggc cctgacccag acctgggcgg 180
gtgagtgcgg ggtcgggagg gaaacggcct ctgtggggag aagcaagggg cccgcccggc 240
gggggcgcag gacccgggaa gccgcgcctg gaggagggtc gggcgggtct cagccactcc 300
tcgcccccag gctcccactc catgaggtat ttctacactt ccgtgtcccg gcccggccgc 360
ggggagcccc gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac 420
agcgacgccg cgagccagag gatggagccg cgggcgccgt ggatagagca ggaggggccg 480
gagtattggg accggaacac acggaatgtg aaggcccagt cacagactga ccgagtggac 540
ctggggaccc tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggcccggg 600
gcgcaggtca cgacccctca tcccccacgg acgggccagg tcgcccacag tctccgggtc 660
cgagatccgc cccgaagccg cgggaccccg agacccttgc cccgggagag gcccaggcgc 720
ctttacccgg tttcattttc agtttaggcc aaaaatcccc ccgggttggt cggggcgggg 780
cggggctcgg gggaccgggc tgacctcggg gtccgggcca ggttctcaca ccatccagat 840
gatgtatggc tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc ggcaggacgc 900
ctacgacggc aaggattaca tcgccctgaa agaggacctg cgctcttgga ccgcggcgga 960
catggcagct cagaccacca agcacaagtg ggaggcggcc catgtggcgg agcagtggag 1020
agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1080
gactctgcag cgcacgggta ccaggggcca cggggcgcct ccctgatcgc ctgtagatct 1140
cccgggctgg cctcccacaa ggaggggaga caattgggac caacactaga atatcgccct 1200
ccctctggtc ctgagggaga ggaatcctcc tgggtttcca gatcctgtac cagagagtga 1260
ctctgaggtt ccgccctgct ctctgacaca attaagggat aaaatctctg aaggaatgac 1320
gggaagacga tccctcgaat actgatgagt ggttcccttt gacacacaca ggcagcagcc 1380
ttgggcccgt gacttttcct ctcaggcctt gttctctgct tcacactcaa tgtgtgtggg 1440
ggtctgagtc cagcacttct gagtccctca gcctccactc aggtcaggac cagaagtcgc 1500
tgttccctct tcagggacta gaattttcca cggaatagga gattatccca ggtgcctgtg 1560
tccaggctgg tgtctgggtt ctgtgctccc ttccccatcc caggtgtcct gtccattctc 1620
aagatagcca catgtgtgct ggaggagtgt cccatgacag atgcaaaatg cctgaatgat 1680
ctgactcttc ctgacagacg cccccaaaac gcatatgact caccacgctg tctctgacca 1740
tgaagccacc ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg 1800
gcagcgggat ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg 1860
ggatggaacc ttccagaagt gggtggctgt ggtggtgcct tctggacagg agcagagata 1920
cacctgccat gtgcagcatg agggtttgcc caagcccctc accctgagat ggggtaagga 1980
gggagacggg ggtgtcatgt cttttaggga aagcaggagc ctctctgacc tttagcaggg 2040
tcagggcccc tcaccttccc ctcttttccc agagccgtct tcccagccca ccatccccat 2100
cgtgggcatc attgctggcc tggttctctt tggagctgtg atcactggag ctgtggtcgc 2160
tgctgtgatg tggaggagga agagctcagg tggggaaggg gtgaagggtg ggtctgagat 2220
ttcttgtctc actgagggtt ccaagaccca ggtagaagtg tgccctgcct cgttactggg 2280
aagcaccacc cacaattatg ggcctaccca gcctgggccc tgtgtgccag cacttactct 2340
tttgtaaagc acctgttaaa atgaaggaca gatttatcac cttgattaca gcggtgatgg 2400
gacctgatcc cagcagtcac aagtcacagg ggaaggtccc tgaggacctt caggagggcg 2460
gttggtccag gacccacacc tgctttcttc atgtttcctg atcccgccct gggtctgcag 2520
tcacacattt ctggaaactt ctctgaggtc caagacttgg aggttcctct aggaccttaa 2580
ggccctgact cctttctggt atctcacagg acattttctt cccacagata gaaaaggagg 2640
gagctactct caggctgcaa gtaagtatga aggaggctga tgcctgaggt ccttgggata 2700
ttgtgtttgg gagcccatgg gggagctcac ccaccccaca attcctcctc tagccacatc 2760
ttctgtggga tctgaccagg ttctgttttt gttctacccc aggcagtgac agtgcccagg 2820
gctctgatgt gtctctcaca gcttgtaaag gtgagagcct ggagggcctg atgtgtgttg 2880
ggtgttgggc agaacagtgg acacagctgt gctatggggt ttctttccat tggatgtatt 2940
gagcatgcga tgggctgttt aaagtgtgac ccctcactgt gacagatacg aatttgttca 3000
tgaatatttt tttctatagt gtgagacagc tgccttgtgt gggactgaga ggcaagagtt 3060
gttcctgccc ttccctttgt gacttga 3087
//