Dbfetch
ID MH350865; SV 1; linear; genomic DNA; STD; HUM; 3164 BP. XX AC MH350865; XX DT 20-FEB-2019 (Rel. 139, Created) DT 20-FEB-2019 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-A) gene, HLA-A-A*32:01:01 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3164 RA Balz V.; RT ; RL Submitted (16-MAY-2018) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; a3eded37b4c5c366b5719511c2692925. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSEngine v. 209.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3164 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3164 FT /gene="HLA-A" FT /allele="A*32:01:01" FT mRNA join(<1..213,343..612,854..1129,1730..2005,2105..2221, FT 2662..2694,2837..2884,3054..>3164) FT /gene="HLA-A" FT /allele="A*32:01:01" FT /product="MHC class I protein" FT exon <1..213 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=1 FT 5'UTR <1..140 FT /gene="HLA-A" FT /allele="A*32:01:01" FT CDS join(141..213,343..612,854..1129,1730..2005,2105..2221, FT 2662..2694,2837..2884,3054..3058) FT /codon_start=1 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /product="MHC class I protein" FT /db_xref="GOA:Q5RJ27" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q5RJ27" FT /protein_id="QBC40729.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAHSQTDRESLRI FT ALRYYNQSEAGSHTIQMMYGCDVGPDGRLLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAMFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT exon 343..612 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=2 FT exon 854..1129 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=3 FT exon 1730..2005 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=4 FT exon 2105..2221 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=5 FT exon 2662..2694 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=6 FT exon 2837..2884 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=7 FT exon 3054..>3164 FT /gene="HLA-A" FT /allele="A*32:01:01" FT /number=8 FT 3'UTR 3059..>3164 FT /gene="HLA-A" FT /allele="A*32:01:01" XX SQ Sequence 3164 BP; 603 A; 907 C; 977 G; 677 T; 0 other; cctggatact cacgacgcgg acccagttct cactcccatt gggtgtcggg tttccagaga 60 agccaatcag tgtcgtcgcg gtcgcggttc taaagtccgc acgcacccac cgggactcag 120 attctcccca gacgccgagg atggccgtca tggcgccccg aaccctcctc ctgctactct 180 tgggggccct ggccctgacc cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc 240 ctctgcgggg agaagcaagg ggccggcccg gcgggggcgc aggacccggg tagccgcgcc 300 gggaggaggg tcgggcgggt ctcagccact cctcgccccc aggctcccac tccatgaggt 360 atttcttcac atccgtgtcc cggcccggcc gcggggagcc ccgcttcatc gccgtgggct 420 acgtggacga cacgcagttc gtgcggtttg acagcgacgc cgcgagccag aggatggagc 480 cgcgggcgcc gtggatagag caggaggggc cggagtattg ggaccaggag acacggaatg 540 tgaaggccca ctcacagact gaccgagaga gcctgcggat cgcgctccgc tactacaacc 600 agagcgaggc cggtgagtga ccccggcccg gggcgcaggt cacgacctct catcccccac 660 ggacgggcca ggtcgcccac agtctccggg tccgagatcc accccgaagc cgcgggaccc 720 cgagaccctt gccccgggag aggcccaggc gcctttaccc ggtttcattt tcagtttagg 780 ccaaaaatcc ccccgggttg gtcggggccg gacggggctc gggggactgg gctgaccgtg 840 gggtcggggc caggttctca caccatccag atgatgtatg gctgcgacgt ggggccggac 900 gggcgcctcc tccgcgggta ccagcaggac gcctacgacg gcaaggatta catcgccttg 960 aacgaggacc tgcgctcttg gaccgcggcg gacatggcgg ctcagatcac ccagcgcaag 1020 tgggaggcgg cccgtgtggc ggagcagttg agagcctacc tggagggcac gtgcgtggag 1080 tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcacggg taccaggggc 1140 cacggggcgc ctccctgatc gcctgtagat ctcccgggct ggcctcccac aaggagggga 1200 gacaattggg accaacacta gaatatcgcc ctccctctgg tcctgaggga gaggaatcct 1260 cctgggtttc cagatcctgt accagagagt gactctgagg ttccgccctg ctctctgaca 1320 caattaaggg ataaaatctc tgaaggaatg acgggaagac gatccctcga atactgatga 1380 gtggttccct ttgacacaca ccggcagcag ccttgggccc gtgacttttc ctctcaggcc 1440 ttgttctctg cttcacactc aatgtgtgtg ggggtctgag tccagcactt ctgagtccct 1500 cagcctccac tcaggtcagg accagaagtc gctgttccct cttcagggac tagaattttc 1560 cacggaatag gagattatcc caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc 1620 ccttccccat cccaggtgtc ctgtccattc tcaagatagc cacatgtgtg ctggaggagt 1680 gtcccatgac agatgcaaaa tgcctgaatg ttctgactct tcctgacaga cgcccccaag 1740 acgcatatga ctcaccacgc tgtctctgac catgaggcca ccctgaggtg ctgggccctg 1800 agcttctacc ctgcggagat cacactgacc tggcagcggg atggggagga ccagacccag 1860 gacacggagc ttgtggagac caggcctgca ggggatggaa ccttccagaa gtgggcgtct 1920 gtggtggtgc cttctggaca ggagcagaga tacacctgcc atgtgcagca tgagggtctg 1980 cccaagcccc tcaccctgag atggggtaag gagggagatg ggggtgtcat gtcttttacg 2040 gaaagcagga gcctctctga cctttagcag ggtcagggcc cctcaccttc ccctcttttc 2100 ccagagccgt cttcccagcc caccatcccc atcgtgggca tcattgctgg cctagttctc 2160 tttggagcta tgttcgctgg agctgtggtc gctgctgtga ggtggaggag gaagagctca 2220 ggtggggtga agggatgaag ggtgggtctg agatttcttg tctcactgag ggttccaaga 2280 cccaggtaga agtgtgccct gcctcgttac tgggaagcac catccacaat tatgggccta 2340 cccagcctgg gccctgtgtg ccagcactta ctcttttgta aagcacctgt taaaatgaag 2400 gacagattta tcaccttgat tacggcggtg atgggacctg atcccagcag tcacaagtca 2460 caggggaagg tccctgagga ccttcaggag ggcggttggt ccaggaccca cacctgcttt 2520 cttcatgttt cctgatcccg ccctgggtct gcagtcacac atttctggaa acttctctga 2580 ggtccaagac ttggaggttc ctctaggacc ttaaggccct ggctcctttc tggtatctca 2640 caggacattt tcttcccaca gatagaaaag gagggagcta ctctcaggct gcaagtaagt 2700 atgaaggagg ctgatgcctg aggtccttgg gatattgtgt ttgggagccc gtgggggagc 2760 tcacccaccc cacaattcct cctctagcca catcttctgt gggatctgac caggttctgt 2820 ttttgtccta ccccaggcag tgacagtgcc cagggctctg atatgtctct cacagcttgt 2880 aaaggtgaga gcctggaggg cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag 2940 ctgtgctatg gggtttcttt gcattggatg tattgagcat gcgatgggct gtttaaagtg 3000 tgactcctca ctgtgacaga tacgaatttg ttcatgaata tttttttcta tagtgtgaga 3060 cagctgcctt gtgtgggact gagaggcaag atttgttcct gcccttccct ttgtgacttg 3120 aagaaccctg actttgtttc tgcaaaggca cctgcatgtg tctg 3164 //