Dbfetch
ID MH285586; SV 1; linear; genomic DNA; STD; HUM; 3321 BP.
XX
AC MH285586;
XX
DT 24-JUN-2018 (Rel. 137, Created)
DT 24-JUN-2018 (Rel. 137, Last updated, Version 1)
XX
DE Homo sapiens isolate NT02152 MHC class I antigen (HLA-A) gene,
DE HLA-A*11:01:01:01 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3321
RA Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT ;
RL Submitted (02-MAY-2018) to the INSDC.
RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852,
RL USA
XX
DR MD5; f7218796a6b7eb94a80ea42c96c7a600.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v.
CC V2.9.1.10480; Sequencher v. V5.4.6
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3321
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT02152"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3321
FT /gene="HLA-A"
FT /allele="HLA-A*11:01:01:01"
FT mRNA join(<119..191,322..591,833..1108,1688..1963,2066..2182,
FT 2625..2657,2800..2847,3017..>3021)
FT /gene="HLA-A"
FT /allele="HLA-A*11:01:01:01"
FT /product="MHC class I antigen"
FT CDS join(119..191,322..591,833..1108,1688..1963,2066..2182,
FT 2625..2657,2800..2847,3017..3021)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*11:01:01:01"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A2Z4C138"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A2Z4C138"
FT /protein_id="AWU67429.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVTRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT
FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT AQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
XX
SQ Sequence 3321 BP; 638 A; 957 C; 1011 G; 715 T; 0 other;
ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcttcgcggt 60
cgctcttcta aagtccgcac gcacccaccg ggactcagat tctccccaga ccccgaggat 120
ggccgtcatg gcgccccgaa ccctcctcct gctactctcg ggggccctgg ccctgaccca 180
gacctgggcg ggtgagtgcg gggtcgggag ggaaaccgcc tctgcgggga gaagcaaggg 240
gccctcctgg cgggggcgca ggaccggggg agccgcgccg ggaggagggt cgggcaggtc 300
tcagccactg ctcgccccca ggctcccact ccatgaggta tttctacacc tccgtgaccc 360
ggcccggccg cggggagccc cgcttcatcg ccgtgggcta cgtggacgac acgcagttcg 420
tgcggttcga cagcgacgcc gcgagccaga ggatggagcc gcgggcgccg tggatagagc 480
aggaggggcc ggagtattgg gaccaggaga cacggaatgt gaaggcccag tcacagactg 540
accgagtgga cctggggacc ctgcgcggct actacaacca gagcgaggac ggtgagtgac 600
cccggcccgg ggcgcaggtc acgacccctc atcccccacg gacgggccag gtggcccaca 660
gtctccgggt ccgagatcca ccccgaagcc gcgggacccc gagacccttg ccccgggaga 720
ggcccaggcg cctttacccg gtttcatttt cagtttaggc caaaaatccc cccgggttgg 780
tcggggccgg gcagggcttg ggggactggg ctgaccgcgg ggtcggggcc aggttctcac 840
accatccaga taatgtatgg ctgcgacgtg gggccggacg ggcgcttcct ccgcgggtac 900
cggcaggacg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcttgg 960
accgcggcgg acatggcagc tcagatcacc aagcgcaagt gggaggcggc ccatgcggcg 1020
gagcagcaga gagcctacct ggagggccgg tgcgtggagt ggctccgcag atacctggag 1080
aacgggaagg agacgctgca gcgcacgggt accaggggcc acggggcgcc tccctgatcg 1140
cctatagatc tcccgggctg gcctcccaca aggaggggag acaattggga ccaacactag 1200
aatatcaccc tccctctggt cctgagggag aggaatcctc ctgggtttcc agatcctgta 1260
ccagagagtg actctgaggt tccgccctgc tctctgacac aattaaggga taaaatctct 1320
gaaggagtga cgggaagacg atccctcgaa tactgatgag tggttccctt tgacaccggc 1380
agcagccttg ggcccgtgac ttttcctctc aggccttgtt ctctgcttca cactcaatgt 1440
gtgtgggggt ctgagtccag cacttctgag tctctcagcc tccactcagg tcaggaccag 1500
aagtcgctgt tcccttctca gggaatagaa gattatccca ggtgcctgtg tccaggctgg 1560
tgtctgggtt ctgtgctctc ttccccatcc cgggtgtcct gtccattctc aagatggcca 1620
catgcgtgct ggtggagtgt cccatgacag atgcaaaatg cctgaatttt ctgactcttc 1680
ccgtcagacc cccccaagac acatatgacc caccacccca tctctgacca tgaggccacc 1740
ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg gcagcgggat 1800
ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg ggatggaacc 1860
ttccagaagt gggcggctgt ggtggtgcct tctggagagg agcagagata cacctgccat 1920
gtgcagcatg agggtctgcc caagcccctc accctgagat ggggtaagga gggagatggg 1980
ggtgtcatgt ctcttaggga aagcaggagc ctctctggag acctttagca gggtcagggc 2040
ccctcacctt cccctctttt cccagagctg tcttcccagc ccaccatccc catcgtgggc 2100
atcattgctg gcctggttct ccttggagct gtgatcactg gagctgtggt cgctgccgtg 2160
atgtggagga ggaagagctc aggtggagaa ggggtgaaag gtggggtctg agatttcttg 2220
tctcactgag ggttccaagc cccagctaga aatgtgccct gtctcattac tgggaagcac 2280
cttccacaat catgggccga cccagcctgg gccctgtgtg ccagcactta ctcttttgta 2340
aagcacctgt taaaatgaag gacagattta tcaccttgat tacggcggtg atgggacctg 2400
ataccagcag tcacaagtca caggggaagg tccctgagga cagacctcag gagggctatt 2460
ggtccaggac ccacacctgc tttcttcatg tttcctgatc ccgccctggg tctgcagtca 2520
cacatttctg gaaacttctc tggggtccaa gactaggagg ttcctctagg accttaaggc 2580
cctggctcct ttctggtatc tcacaggaca ttttcttccc acagatagaa aaggagggag 2640
ttacactcag gctgcaagta agtatgaagg aggctgatgc ctgaggtcct tgggatattg 2700
tgtttgggag cccatggggg agctcaccca ccccacaatt cctcctctag ccacatcttc 2760
tgtgggatct gaccaggttc tgtttttgtt ctaccccagg cagtgacagt gcccagggct 2820
ctgatgtgtc tctcacagct tgtaaaggtg agagcttgga gggcctgatg tgtgttgggt 2880
gttgggcgga acagtggaca cagctgtgct atggggtttc tttgcattgg atgtattgag 2940
catgcgatgg gctgtttaag gtgtgacccc tcactgtgat ggatatgaat ttgttcatga 3000
atattttttt ctatagtgtg agacagctgc cttgtgtggg actgagaggc aagagttgtt 3060
cctgcccttc cctttgtgac ttgaagaacc ctgactttgt ttctgcaaag gcacctgcat 3120
gtgtctgtgt tcgtgtaggc ataatgtgag gaggtgggga gaccacccca ccccgatgtc 3180
caccatgacc ctcttcccac gctgacctgt gctccctctc caatcatctt tcctgttcca 3240
gagaggtggg gctgaggtgt ctccatctct gtctcaactt catggtgcac tgagctgtaa 3300
cttcttcctt ccctattaaa a 3321
//