Dbfetch
ID MH269345; SV 1; linear; genomic DNA; STD; HUM; 3060 BP. XX AC MH269345; XX DT 11-FEB-2019 (Rel. 139, Created) DT 11-FEB-2019 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-B) gene, HLA-B*15:17:01New allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3060 RA Balz V., Krause S., Enczmann J.; RT "New HLA class 1 alleles"; RL Unpublished. XX RN [2] RP 1-3060 RA Balz V., Krause S., Enczmann J.; RT ; RL Submitted (27-APR-2018) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; 936ad729d239ef0bcfa4ce2591df18bd. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.9.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3060 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3060 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT mRNA join(1..233,362..631,877..1152,1728..2003,2108..2224, FT 2666..2698,2805..3060) FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /product="MHC class I protein" FT exon 1..233 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=1 FT 5'UTR 1..160 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT CDS join(161..233,362..631,877..1152,1728..2003,2108..2224, FT 2666..2698,2805..2848) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /product="MHC class I protein" FT /db_xref="GOA:Q31602" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q31602" FT /protein_id="QAX33605.1" FT /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDRETRNMKASAQTYRENLRI FT ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" FT intron 234..361 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=1 FT exon 362..631 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=2 FT intron 632..876 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=2 FT exon 877..1152 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=3 FT intron 1153..1727 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=3 FT exon 1728..2003 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=4 FT intron 2004..2107 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=4 FT exon 2108..2224 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=5 FT intron 2225..2665 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=5 FT exon 2666..2698 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=6 FT intron 2699..2804 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=6 FT exon 2805..3060 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" FT /number=7 FT 3'UTR 2849..3060 FT /gene="HLA-B" FT /allele="HLA-B*15:17:01New" XX SQ Sequence 3060 BP; 563 A; 891 C; 977 G; 629 T; 0 other; aacctatgtc gggtccttct tccaggatac tcgtgacgcg tccccatttc ccactcccat 60 tgggtgtcgg gtgtctagag aagccaatca gtgtcgccgg ggtcccagtt ctaaagtccc 120 cacgcaccca cccggactca gaatctcctc agacgccgag atgcgggtca cggcgccccg 180 aaccgtcctc ctgctgctct cgggagccct ggccctgacc gagacctggg ccggtgagtg 240 cgggtcggga gggaaatggc ctctgtgggg aggagcgagg ggaccgcagg cgggggcgca 300 ggacccgggg agccgcgccg ggaggagggt cgggcgggtc tcagcccctc ctcgccccca 360 ggctcccact ccatgaggta tttctacacc gccatgtccc ggcccggccg cggggagccc 420 cgcttcatcg cagtgggcta cgtggacgac acccagttcg tgaggttcga cagcgacgcc 480 gcgagtccga ggatggcgcc ccgggcgcca tggatagagc aggaggggcc ggagtattgg 540 gaccgggaga cacggaacat gaaggcctcc gcgcagactt accgagagaa cctgcggatc 600 gcgctccgct actacaacca gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc 660 acgactcccc atcccccacg tacggcccgg gtcgccccga gtctccgggt ccgagatccg 720 cccccctgag gccgcgggac ccgcccaaac cctcgaccgg cgagagcccc aggcgcgttt 780 acccggtttc attttcagtt gaggccaaaa tccccgcggg ttggtcgggg cggggcgggg 840 ctcgggggac ggggctgacc gcggggcctg ggccagggtc tcacaccctc cagaggatgt 900 acggctgcga cgtggggccg gacgggcgcc tcctccgcgg gtaccaccag gacgcctacg 960 acggcaagga ttacatcgcc ctgaacgagg acctgagctc ctggaccgcg gcggacacgg 1020 cggctcagat cacccagcgc aagtgggagg cggcccgtga ggcggagcag ctgagagcct 1080 acctggaggg cctgtgcgtg gagtggctcc gcagatacct ggagaacggg aaggagacgc 1140 tgcagcgcgc gggtaccagg ggcagtgggg agccttcccc atctcctata ggtcgccggg 1200 gatggcctcc cacgagaaga ggaggaaaat gggatcagcg ctagaatgtc gccctccctt 1260 gaatggagaa tggcatgagt tttcctgagt ttcctctgag ggccccctct tctctctagg 1320 acaattaagg gatgacgtct ctgaggaaat ggaggggaag acagtcccta ggatagtgat 1380 caggggtccc ctttgacccc tgcagcagcc ttgggaaccg tgacttttcc tctcaggcct 1440 tgttctctgc ctcacactca gtgtgtttgg ggctctgatt ccagcacttc tgagtcactt 1500 tacctccact cagatcagga gcagaagtcc ctgttccccg ctcagagact cgaactttcc 1560 aatgaatagg agattatccc aggtgcctgc gtccaggctg gtgtctgggt tctgtgcccc 1620 ttccccaccc caggtgtcct gtccattctc aggctggtca catgggtggt cctagggtgt 1680 cccatgagag atgcaaagcg cctgaatttt ctgactcttc ccatcagacc ccccaaagac 1740 acatgtgacc caccacccca tctctgacca tgaggccacc ctgaggtgct gggccctggg 1800 cttctaccct gcggagatca cactgacctg gcagcgggat ggcgaggacc aaactcagga 1860 caccgagctc gtggagacca gaccagcagg agatagaacc ttccagaagt gggcagctgt 1920 ggtggtgcct tctggagaag agcagagata cacatgccat gtacagcatg aggggctgcc 1980 gaagcccctc accctgagat ggggtaagga gggggatgag gggtcatatc tgttctcagg 2040 gaaagcagga gcccttctgg agcccttcag cagggtcagg gcccctcatc ttcccctcct 2100 ttcccagagc catcttccca gtccaccatc cccatcgtgg gcattgttgc tggcctggct 2160 gtcctagcag ttgtggtcat cggagctgtg gtcgctactg tgatgtgtag gaggaagagc 2220 tcaggtaggg aaggggtgag gggtggggtc tgggttttct tgtcccactg ggggtttcaa 2280 gccccaggta gaagtgttcc ctgcctcatt actgggaagc agcatccaca caggggctaa 2340 cgcagcctgg gaccctgtgt gccagcactt actcttttgt gcagcacatg tgacaatgaa 2400 ggacagatgt atcgccttga tggttgtggt gttggggtcc tgattccagc attcatgagt 2460 caggggaagg tccctgctaa ggacagacct taggagggca gttggtccag gacccacact 2520 tgctttcctc gtgtttcctg atcctgccct gggtctgtag tcatacttct ggaaattcct 2580 tttggttcca agacgaggag gttcctctaa gatctcatgg tcctgcttcc tcccagtccc 2640 ctcacaggac attttcttcc cacaggtgga aaaggaggga gctactctca ggctgcgtgt 2700 aagtggtggg ggtgggagtg tggaggagct cacccacccc ataattcctc ctgtcccacg 2760 tctcctgcgg gctctgacca ggtcctgttt ttgttctact ccagccagcg acagtgccca 2820 gggctctgat gtgtctctca cagcttgaaa aggtgagatt cttggggtct agagtgggtg 2880 gggtggcggg tctgggggtg ggtggggcag tggggaaagg cctgggtaat ggagattctt 2940 tgattgggat gtttcgcgtg tgtcgtgggc tgttcagagt gtcatcactt accatgacta 3000 accagaattt gttcatgact gttgttttct gtagcctgag acagctgtct tgtgagggac 3060 //