Dbfetch
ID MH269342; SV 1; linear; genomic DNA; STD; HUM; 3164 BP. XX AC MH269342; XX DT 11-FEB-2019 (Rel. 139, Created) DT 11-FEB-2019 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-A) gene, HLA-A*68:02:01New allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3164 RA Balz V., Krause S., Enczmann J.; RT "New HLA class 1 alleles"; RL Unpublished. XX RN [2] RP 1-3164 RA Balz V., Krause S., Enczmann J.; RT ; RL Submitted (27-APR-2018) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; b5659abf5f9191d6a9103c61997ddf44. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.9.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3164 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3164 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT mRNA join(1..213,344..613,856..1131,1732..2007,2107..2223, FT 2662..2694,2837..2884,3054..3164) FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /product="MHC class I protein" FT exon 1..213 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=1 FT 5'UTR 1..140 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT CDS join(141..213,344..613,856..1131,1732..2007,2107..2223, FT 2662..2694,2837..2884,3054..3058) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /product="MHC class I protein" FT /db_xref="GOA:Q1ELT0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q1ELT0" FT /protein_id="QAX33602.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQRMYGCDVGPDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT intron 214..343 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=1 FT exon 344..613 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=2 FT intron 614..855 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=2 FT exon 856..1131 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=3 FT intron 1132..1731 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=3 FT exon 1732..2007 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=4 FT intron 2008..2106 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=4 FT exon 2107..2223 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=5 FT intron 2224..2661 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=5 FT exon 2662..2694 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=6 FT intron 2695..2836 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=6 FT exon 2837..2884 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=7 FT intron 2885..3053 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=7 FT exon 3054..3164 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" FT /number=8 FT 3'UTR 3059..3164 FT /gene="HLA-A" FT /allele="HLA-A*68:02:01New" XX SQ Sequence 3164 BP; 614 A; 910 C; 975 G; 665 T; 0 other; cctggatact cacgacgcgg acccagttct cactcccatt gggtgtcggg tttccagaga 60 agccaatcag tgtcgtcgcg gtcgcggttc taaagtccgc acgcacccac cgggactcag 120 attctcccca gacgccgagg atggccgtca tggcgccccg aaccctcgtc ctgctactct 180 cgggggccct ggccctgacc cagacctggg cgggtgagtg cggggtcggg agggaaacgg 240 cctctgtggg gagaagcaag gggcccgccc ggcgggggcg caggacccgg gaagccgcgc 300 ctggaggagg gtcgggcggg tctcagccac tcctcgcccc caggctccca ctccatgagg 360 tatttctaca cctccatgtc ccggcccggc cgcggggagc cccgcttcat cgccgtgggc 420 tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca gaggatggag 480 ccgcgggcgc cgtggataga gcaggagggg ccggagtatt gggaccggaa cacacggaat 540 gtgaaggccc agtcacagac tgaccgagtg gacctgggga ccctgcgcgg ctactacaac 600 cagagcgagg ccggtgagtg accccggccc gggggcgcag gtcacgaccc ctcatccccc 660 acggacgggc caggtcgccc acagtctccg ggtccgagat ccgccccgaa gccgcgggac 720 cccgagaccc ttgccccggg agaggcccag gcgcctttac ccggtttcat tttcagttta 780 ggccaaaaat ccccccgggt tggtcggggc ggggcggggc tcgggggacc gggctgacct 840 cggggtccgg gccaggttct cacaccatcc agaggatgta tggctgcgac gtggggccgg 900 acgggcgctt cctccgcggg taccaccagt acgcctacga cggcaaggat tacatcgccc 960 tgaaagagga cctgcgctct tggaccgcgg cggacatggc agctcagacc accaagcaca 1020 agtgggaggc ggcccatgtg gcggagcagt ggagagccta cctggagggc acgtgcgtgg 1080 agtggctccg cagatacctg gagaacggga aggagacgct gcagcgcacg ggtaccaggg 1140 gccacggggc gcctccctga tcgcctgtag atctcccggg ctggcctccc acaaggaggg 1200 gagacaattg ggaccaacac tagaatatcg ccctccctct ggtcctgagg gagaggaatc 1260 ctcctgggtt tccagatcct gtaccagaga gtgactctga ggttccgccc tgctctctga 1320 cacaattaag ggataaaatc tctgaaggaa tgacgggaag acgatccctc gaatactgat 1380 gagtggttcc ctttgacaca cacaggcagc agccttgggc ccgtgacttt tcctctcagg 1440 ccttgttctc tgcttcacac tcaatgtgtg tgggggtctg agtccagcac ttctgagtcc 1500 ctcagcctcc actcaggtca ggaccagaag tcgctgttcc ctcttcaggg actagaattt 1560 tccacggaat aggagattat cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc 1620 tcccttcccc atcccaggtg tcctgtccat tctcaagata gccacatgtg tgctggagga 1680 gtgtcccatg acagatgcaa aatgcctgaa tgatctgact cttcctgaca gacgccccca 1740 aaacgcatat gactcaccac gctgtctctg accatgaagc caccctgagg tgctgggccc 1800 tgagcttcta ccctgcggag atcacactga cctggcagcg ggatggggag gaccagaccc 1860 aggacacgga gctcgtggag accaggcctg caggggatgg aaccttccag aagtgggtgg 1920 ctgtggtggt gccttctgga caggagcaga gatacacctg ccatgtgcag catgagggtt 1980 tgcccaagcc cctcaccctg agatggggta aggagggaga cgggggtgtc atgtctttta 2040 gggaaagcag gagcctctct gacctttagc agggtcaggg cccctcacct tcccctcttt 2100 tcccagagcc gtcttcccag cccaccatcc ccatcgtggg catcattgct ggcctggttc 2160 tctttggagc tgtgatcact ggagctgtgg tcgctgctgt gatgtggagg aggaagagct 2220 caggtgggga aggggtgaag ggtgggtctg agatttcttg tctcactgag ggttccaaga 2280 cccaggtaga agtgtgccct gcctcgttac tgggaagcac cacccacaat tatgggccta 2340 cccagcctgg gccctgtgtg ccagcactta ctcttttgta aagcacctgt taaaatgaag 2400 gacagattta tcaccttgat tacagcggtg atgggacctg atcccagcag tcacaagtca 2460 caggggaagg tccctgagga ccttcaggag ggcggttggt ccaggaccca cacctgcttt 2520 cttcatgttt cctgatcccg ccctgggtct gcagtcacac atttctggaa acttctctga 2580 ggtccaagac ttggaggttc ctctaggacc ttaaggccct gactcctttc tggtatctca 2640 caggacattt tcttcccaca gatagaaaag gagggagcta ctctcaggct gcaagtaagt 2700 atgaaggagg ctgatgcctg aggtccttgg gatattgtgt ttgggagccc atgggggagc 2760 tcacccaccc cacaattcct cctctagcca catcttctgt gggatctgac caggttctgt 2820 ttttgttcta ccccaggcag tgacagtgcc cagggctctg atgtgtctct cacagcttgt 2880 aaaggtgaga gcctggaggg cctgatgtgt gttgggtgtt gggcggaaca gtggacacag 2940 ctgtgctatg gggtttcttt ccattggatg tattgagcat gcgatgggct gtttaaagtg 3000 tgacccctca ctgtgacaga tacgaatttg ttcatgaata tttttttcta tagtgtgaga 3060 cagctgcctt gtgtgggact gagaggcaag agttgttcct gcccttccct ttgtgacttg 3120 aagaaccctg actttgtttc tgcaaaggca cctgcatgtg tctg 3164 //