Dbfetch

ID   MH269340; SV 1; linear; genomic DNA; STD; HUM; 3148 BP.
XX
AC   MH269340;
XX
DT   11-FEB-2019 (Rel. 139, Created)
DT   11-FEB-2019 (Rel. 139, Last updated, Version 1)
XX
DE   Homo sapiens MHC class I protein (HLA-A) gene, HLA-A*30:01:01New allele,
DE   complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-3148
RA   Balz V., Krause S., Enczmann J.;
RT   "New HLA class 1 alleles";
RL   Unpublished.
XX
RN   [2]
RP   1-3148
RA   Balz V., Krause S., Enczmann J.;
RT   ;
RL   Submitted (27-APR-2018) to the INSDC.
RL   University Hospital Duesseldorf, Institute for Transplantation Diagnostics
RL   and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW
RL   40225, Germany
XX
DR   MD5; 624a0736cc0326bf33b40318f1e512bc.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: NGSengine v. 2.9.0
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3148
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            1..3148
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT   mRNA            join(1..213,344..613,855..1130,1710..1985,2088..2204,
FT                   2647..2679,2822..2869,3039..3148)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /product="MHC class I protein"
FT   exon            1..213
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=1
FT   5'UTR           1..140
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT   CDS             join(141..213,344..613,855..1130,1710..1985,2088..2204,
FT                   2647..2679,2822..2869,3039..3043)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /product="MHC class I protein"
FT                   /db_xref="GOA:Q2LC93"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q2LC93"
FT                   /protein_id="QAX33600.1"
FT                   /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFSTSVSRPGSGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQERPEYWDQETRNVKAQSQTDRVDLGT
FT                   LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYEQHAYDGKDYIALNEDLRSWTAADMA
FT                   AQITQRKWEAARWAEQLRAYLEGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT                   GGSYTQAASSDSAQGSDVSLTACKV"
FT   intron          214..343
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=1
FT   exon            344..613
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=2
FT   intron          614..854
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=2
FT   exon            855..1130
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=3
FT   intron          1131..1709
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=3
FT   exon            1710..1985
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=4
FT   intron          1986..2087
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=4
FT   exon            2088..2204
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=5
FT   intron          2205..2646
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=5
FT   exon            2647..2679
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=6
FT   intron          2680..2821
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=6
FT   exon            2822..2869
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=7
FT   intron          2870..3038
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=7
FT   exon            3039..3148
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
FT                   /number=8
FT   3'UTR           3044..3148
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*30:01:01New"
XX
SQ   Sequence 3148 BP; 609 A; 897 C; 970 G; 672 T; 0 other;
     cctggatact cacgacgcgg acccagttct cactcccatt gggtgtcggg tttccagaga        60
     agccaatcag tgtcgtcgcg gtcgctgttc taaagcccgc acgcacccac cgggactcag       120
     attctcccca gacgccgagg atggccgtca tggcgccccg aaccctcctc ctgctactct       180
     cgggggccct ggccctgacc cagacctggg cgggtgagtg cggggtcggg agggaaaccg       240
     cctctgcggg gagaagcaag gggccctcct ggcgggggcg caggaccggg ggagccgcgc       300
     cgggaggagg gtcggtcagg tctcagccac tgctcgcccc caggctccca ctccatgagg       360
     tatttctcca catccgtgtc ccggcccggc agtggagagc cccgcttcat cgcagtgggc       420
     tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca gaggatggag       480
     ccgcgggcgc cgtggataga gcaggagagg cctgagtatt gggaccagga gacacggaat       540
     gtgaaggccc agtcacagac tgaccgagtg gacctgggga ccctgcgcgg ctactacaac       600
     cagagcgagg ccggtgagtg accccggccg ggggcgcagg tcacgacccc tcatccccca       660
     cggacgggcc aggtcgccca cagtctccgg gtccgagatc caccccgaag ccgcgggacc       720
     ccgagaccct tgacccggga gaggcccagg cgcctttacc cggtttcatt ttcagtttag       780
     gccaaaaatt cccccgggtt ggtcggggct gggcggggct cgggggactg ggctgaccgc       840
     ggggtcgggg ccaggttctc acaccatcca gataatgtat ggctgcgacg tggggtcgga       900
     cgggcgcttc ctccgcgggt atgaacagca cgcctacgac ggcaaggatt acatcgccct       960
     gaacgaggac ctgcgctctt ggaccgcggc ggacatggcg gctcagatca cccagcgcaa      1020
     gtgggaggcg gcccgttggg cggagcagtt gagagcctac ctggagggca cgtgcgtgga      1080
     gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcacgg gtaccagggg      1140
     ccacggggcg ccttcctgat cgcctgtaga tctcccgggc tggcctccca caaggagggg      1200
     agacaattgg gaccaacact agaatatcac cctccctctg gtcctgaggg agaggaatcc      1260
     tcctgggttt ccagatcctg taccagagag tgactctgag gttccgccct gctctctgac      1320
     acaattaagg gataaaatct ctgaaggagt gacgggaaga cgatccctcg aatactgatg      1380
     agtggttccc tttgacaccg gcagcagcct tgggcccgtg acttttcctc tcaggccttg      1440
     ttctctgctt cacactcaat gtgtgtgggg gtctgagtcc agcacttctg agtccctcag      1500
     cctccactca ggtcaggacc agaagtcgct gttcccttct cagggaatag aagattatcc      1560
     caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc tcttccccat cccgggtgtc      1620
     ctgtccattc tcaagatggc cacatgcgtg ctggtggagt gtcccatgac agatgcaaaa      1680
     tgcctgaatt ttctgactct tcccgtcaga cccccccaag acacatatga cccaccaccc      1740
     catctctgac catgaggcca ccctgaggtg ctgggccctg ggcttctacc ctgcggagat      1800
     cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc tcgtggagac      1860
     caggcctgca ggggatggaa ccttccagaa gtgggcggct gtggtggtgc cttctggaga      1920
     ggagcagaga tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag      1980
     atggggtaag gagggagatg agggtgtcat gtctcttagg gaaagcagga gcctctctgg      2040
     agacctttag cagggtcagg gcccctcacc ttcccctctt ttcccagagc tgtcttccca      2100
     gcccaccatc cccatcgtgg gcatcattgc tggcctggtt ctccttggag ctgtgatcac      2160
     tggagctgtg gtcgctgccg tgatgtggag gaggaagagc tcaggtggag aaggggtgaa      2220
     gggtggggtc tgagatttct tgtctcactg agggttccaa gccccagcta gaaatgtgcc      2280
     ctgtctcatt actgggaagc accatccaca atcatgggcc tacccagcct gggccctgtg      2340
     tgccagcact tactcttttg taaagcacct gttaaaatga aggacagatt tatcaccttg      2400
     attacggcgg tgatgggacc tgatcccagc agtcacaagt cacaggggaa ggtccctgag      2460
     gacagacctc aggagggcta ttggtccagg acccacacct gctttcttca tgtttcctga      2520
     tcccgccctg ggtctgcagt cacacatttc tggaaacttc tctggggtcc aagactagga      2580
     ggttcctcta ggaccttaag gccctggctc ctttctggta tctcacagga cattttcttc      2640
     tcacagatag aaaaggaggg agttacactc aggctgcaag taagtatgaa ggaggctgat      2700
     gcctgaggtc cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa      2760
     ttcctcctct agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca      2820
     ggcagtgaca gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcttg      2880
     gaggacctaa tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt      2940
     tctttgcatt ggatgtattg agcatgcgat gggctgttta aggtgtgacc cctcactgtg      3000
     atggatatga atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg      3060
     ggactgagag gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt      3120
     gtttctgcaa aggcacctgc atgtgtct                                         3148
//