Dbfetch
ID MH269334; SV 1; linear; genomic DNA; STD; HUM; 3163 BP. XX AC MH269334; XX DT 11-FEB-2019 (Rel. 139, Created) DT 11-FEB-2019 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens MHC class I protein (HLA-A) gene, HLA-A*02:01:01New11 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3163 RA Balz V., Krause S., Enczmann J.; RT "New HLA class 1 alleles"; RL Unpublished. XX RN [2] RP 1-3163 RA Balz V., Krause S., Enczmann J.; RT ; RL Submitted (27-APR-2018) to the INSDC. RL University Hospital Duesseldorf, Institute for Transplantation Diagnostics RL and Cell Therapeutics, Medical Faculty, Moorenstr. 5, Duesseldorf, NRW RL 40225, Germany XX DR MD5; 6b227f573cd81542a515d64a58ba9c37. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.9.0 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3163 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3163 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT mRNA join(1..213,344..613,855..1130,1731..2006,2106..2222, FT 2661..2693,2836..2883,3053..3163) FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /product="MHC class I protein" FT exon 1..213 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=1 FT 5'UTR 1..140 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT CDS join(141..213,344..613,855..1130,1731..2006,2106..2222, FT 2661..2693,2836..2883,3053..3057) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /product="MHC class I protein" FT /db_xref="GOA:Q53Z42" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q53Z42" FT /protein_id="QAX33594.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT intron 214..343 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=1 FT exon 344..613 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=2 FT intron 614..854 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=2 FT exon 855..1130 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=3 FT intron 1131..1730 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=3 FT exon 1731..2006 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=4 FT intron 2007..2105 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=4 FT exon 2106..2222 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=5 FT intron 2223..2660 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=5 FT exon 2661..2693 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=6 FT intron 2694..2835 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=6 FT exon 2836..2883 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=7 FT intron 2884..3052 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=7 FT exon 3053..3163 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" FT /number=8 FT 3'UTR 3058..3163 FT /gene="HLA-A" FT /allele="HLA-A*02:01:01New11" XX SQ Sequence 3163 BP; 613 A; 903 C; 975 G; 672 T; 0 other; cctggatact cacgacgcgg acccagttct cactcccatt gggtgtcggg tttccagaga 60 agccaatcag tgtcgtcgcg gtcgcggttc taaagtccgc acgcacccac cgggactcag 120 attctcccca gacgccgagg atggccgtca tggcgccccg aaccctcgtc ctgctactct 180 cgggggctct ggccctgacc cagacctggg cgggtgagtg cggggtcggg agggaaacgg 240 cctctgtggg gagaagcaac gggcccgcct ggcgggggcg caggacccgg gaagccgcgc 300 cgggaggagg gtcgggcggg tctcagccac tcctcgtccc caggctctca ctccatgagg 360 tatttcttca catccgtgtc ccggcccggc cgcggggagc cccgcttcat cgcagtgggc 420 tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagcca gaggatggag 480 ccgcgggcgc cgtggataga gcaggagggt ccggagtatt gggacgggga gacacggaaa 540 gtgaaggccc actcacagac tcaccgagtg gacctgggga ccctgcgcgg ctactacaac 600 cagagcgagg ccggtgagtg accccggccc ggggcgcagg tcacgacctc tcatccccca 660 cggacgggcc aggtcgccca cagtctccgg gtccgagatc cgccccgaag ccgcgggacc 720 ccgagaccct tgccccggga gaggcccagg cgcctttacc cggtttcatt ttcagtttag 780 gccaaaaatc cccccaggtt ggtcggggcg gggcggggct cgggggaccg ggctgaccgc 840 ggggtccggg ccaggttctc acaccgtcca gaggatgtat ggctgcgacg tggggtcgga 900 ctggcgcttc ctccgcgggt accaccagta cgcctacgac ggcaaggatt acatcgccct 960 gaaagaggac ctgcgctctt ggaccgcggc ggacatggca gctcagacca ccaagcacaa 1020 gtgggaggcg gcccatgtgg cggagcagtt gagagcctac ctggagggca cgtgcgtgga 1080 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcacgg gtaccagggg 1140 ccacggggcg cctccctgat cgcctgtaga tctcccgggc tggcctccca caaggggggg 1200 agacaattgg gaccaacact agaatatcgc cctccctctg gtcctgaggg agaggaatcc 1260 tcctgggttt ccagatcctg taccagagag tgactctgag gttccgccct gctctctgac 1320 acaattaagg gataaaatct ctgaaggaat gacgggaaga cgatccctcg aatactgatg 1380 agtggttccc tttgacacac acaggcagca gccttgggcc cgtgactttt cctctcaggc 1440 cttgttctct gcttcacact caatgtgtgt gggggtctga gtccagcact tctgagtcct 1500 tcagcctcca ctcaggtcag gaccagaagt cgctgttccc tcttcaggga ctagaatttt 1560 ccacggaata ggagattatc ccaggtgcct gtgtccaggc tggtgtctgg gttctgtgct 1620 cccttcccca tcccaggtgt cctgtccatt ctcaagatag ccacatgtgt gctggaggag 1680 tgtcccatga cagatgcaaa atgcctgaat gatctgactc ttcctgacag acgcccccaa 1740 aacgcatatg actcaccacg ctgtctctga ccatgaagcc accctgaggt gctgggccct 1800 gagcttctac cctgcggaga tcacactgac ctggcagcgg gatggggagg accagaccca 1860 ggacacggag ctcgtggaga ccaggcctgc aggggatgga accttccaga agtgggcggc 1920 tgtggtggtg ccttctggac aggagcagag atacacctgc catgtgcagc atgagggttt 1980 gcccaagccc ctcaccctga gatggggtaa ggagggagac gggggtgtca tgtcttttag 2040 ggaaagcagg agcctctctg acctttagca gggtcagggc ccctcacctt cccctctttt 2100 cccagagccg tcttcccagc ccaccatccc catcgtgggc atcattgctg gcctggttct 2160 ctttggagct gtgatcactg gagctgtggt cgctgctgtg atgtggagga ggaagagctc 2220 aggtggggaa ggggtgaagg gtgggtctga gatttcttgt ctcactgagg gttccaagac 2280 ccaggtagaa gtgtgccctg cctcgttact gggaagcacc acccacaatt atgggcctac 2340 ccagcctggg ccctgtgtgc cagcacttac tcttttgtaa agcacctgtt aaaatgaagg 2400 acagatttat caccttgatt acagcggtga tgggacctga tcccagcagt cacaagtcac 2460 aggggaaggt ccctgaggac cttcaggagg gcggttggtc caggacccac acctgctttc 2520 ttcatgtttc ctgatcccgc cctgggtctg cagtcacaca tttctggaaa cttctctgag 2580 gtccaagact tggaggttcc tctaggacct taaggccctg actcctttct ggtatctcac 2640 aggacatttt cttcccacag atagaaaagg agggagctac tctcaggctg caagtaagta 2700 tgaaggaggc tgatgcctga ggtccttggg atattgtgtt tgggagccca tgggggagct 2760 cacccacccc acaattcctc ctctagccac atcttctgtg ggatctgacc aggttctgtt 2820 tttgttctac cccaggcagt gacagtgccc agggctctga tgtgtctctc acagcttgta 2880 aaggtgagag cctggagggc ctgatgtgtg ttgggtgttg ggcggaacag tggacacagc 2940 tgtgctatgg ggtttctttc cattggatgt attgagcatg cgatgggctg tttaaagtgt 3000 gacccctcac tgtgacagat acgaatttgt tcatgaatat ttttttctat agtgtgagac 3060 agctgccttg tgtgggactg agaggcaaga gttgttcctg cccttccctt tgtgacttga 3120 agaaccctga ctttgtttct gcaaaggcac ctgcatgtgt ctg 3163 //