Dbfetch
ID MH036499; SV 1; linear; genomic DNA; STD; HUM; 3333 BP. XX AC MH036499; XX DT 08-MAY-2018 (Rel. 136, Created) DT 09-MAY-2018 (Rel. 136, Last updated, Version 5) XX DE Homo sapiens isolate NT02129 MHC class I antigen (HLA-A) gene, HLA-A*25:04 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3333 RA Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (08-MAR-2018) to the INSDC. RL Oncology, Georgetown University, 11333 Woodglen Dr, Rockville, MD 20852, RL USA XX DR MD5; cfa5d042bc114a938b5a2504a2d87160. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V2.7.0.9307; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3333 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT02129" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3333 FT /gene="HLA-A" FT /allele="HLA-A*25:04" FT mRNA join(<117..189,320..589,831..1106,1707..1982,2082..2198, FT 2637..2669,2812..2859,3029..>3033) FT /gene="HLA-A" FT /allele="HLA-A*25:04" FT /product="MHC class I antigen" FT CDS join(117..189,320..589,831..1106,1707..1982,2082..2198, FT 2637..2669,2812..2859,3029..3033) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*25:04" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2S1B6V4" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2S1B6V4" FT /protein_id="AWC68305.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQTDRESLRI FT ALRYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWETAHEAEQQRAYLEGRCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVIAGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" XX SQ Sequence 3333 BP; 637 A; 963 C; 1015 G; 718 T; 0 other; agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60 cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120 ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggccctggcc ctgacccaga 180 cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaaggggc 240 ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg aggagggtcg ggcgggtctc 300 agccactcct cgcccccagg ctcccactcc atgaggtatt tctacacctc cgtgtcccgg 360 cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg 420 cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag 480 gaggggccgg agtattggga ccggaacaca cggaatgtga aggcccactc acagactgac 540 cgagagagcc tgcggatcgc gctccgctac tacaaccaga gcgaggacgg tgagtgaccc 600 cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt 660 ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg 720 cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc 780 ggggcggggc ggggctcggg ggaccgggct gacctcgggg tccgggccag gttctcacac 840 catccagagg atgtatggct gcgacgtggg gccggacggg cgcttcctcc gcgggtacca 900 gcaggacgct tacgacggca aggattacat cgccctgaac gaggacctgc gctcttggac 960 cgcggcggac atggcggctc agatcaccca gcgcaagtgg gagacggccc atgaggcgga 1020 gcagcagaga gcctacctgg agggccggtg cgtggagtgg ctccgcagat acctggagaa 1080 cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1140 tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1200 tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1260 agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1320 aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacaccg 1380 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1440 gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc 1500 agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag 1560 gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg 1620 tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc 1680 ctgaatgttc tgactcttcc tgacagacgc ccccaagacg catatgactc accacgctgt 1740 ctctgaccat gaggccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 1800 actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 1860 gcctgcaggg gatgggacct tccagaagtg ggcgtctgtg gtggtgcctt ctggacagga 1920 gcagagatac acctgccatg tgcagcatga gggtctgccc aagcccctca ccctgagatg 1980 gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct 2040 ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac 2100 catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcgctggagc 2160 tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaaggga tgaagggtgg 2220 gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc 2280 gttactggga agcaccatcc acaattatga gcctacccag cctgggccct gtgtgccagc 2340 acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacgg 2400 cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc 2460 aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg 2520 ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta 2580 ggaccttaag gccctggctc ctttctggta tctcacagga cattttcttc ccacagatag 2640 aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc 2700 cttgggatat tgtgtttggg agcccgtggg ggagctcacc caccccacaa ttcctcctct 2760 agccacatgt tctgtgggat ctgaccaggt tctgtttttg tcctacccca ggcagtgaca 2820 gtgcccaggg ctctgatatg tctctcacag cttgtaaagg tgagagcctg gagggcctga 2880 tgtgtgttgg gtgttgggcg gaacagtgga cgcagctgtg ctatggggtt tctttgcatt 2940 ggatgtattg agcatgcgat gggctgttta aagtgtgact cctcactgtg acagatacga 3000 atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag 3060 gcaagatttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa 3120 aggcacctgc atgtgtctgt gttcttgtag gcataatgtg aggaggtggg gagaccaccc 3180 cacccccatg tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc 3240 tttcctgttc cagagaggtg gggctgaggt gtctccatct ctgcctcaac ttcatggtgc 3300 actgagctgt aactttttcc ttccctatta aaa 3333 //