Dbfetch
ID MG954064; SV 1; linear; genomic DNA; STD; HUM; 3195 BP. XX AC MG954064; XX DT 23-NOV-2018 (Rel. 139, Created) DT 23-NOV-2018 (Rel. 139, Last updated, Version 1) XX DE Homo sapiens isolate 71704723 MHC class I antigen (HLA-A) gene, HLA-A*68 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3195 RA Ferrari-Lacraz S., Masson D., Villard J., Buhler S.; RT "Sequence based typing of 10 novel HLA class I and II alleles"; RL Unpublished. XX RN [2] RP 1-3195 RA Ferrari-Lacraz S., Masson D., Villard J., Buhler S.; RT ; RL Submitted (14-FEB-2018) to the INSDC. RL Department of Genetic and Laboratory Medicine, Transplantation Immunology RL Unit/National Reference Laboratory for Histocompatibility, Geneva RL University Hospitals, Gabrielle-Perret-Gentil 4, Geneva 1211 Geneve 4, RL Switzerland XX DR MD5; 9f86a8c2607f19e96a2489fbf408f62c. XX CC ##Assembly-Data-START## CC Assembly Method :: HLA TypeStream v. 1.1.0.11; HLA Twin v. CC 12.12.2017 CC Sequencing Technology :: Illumina; IonTorrent CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3195 FT /organism="Homo sapiens" FT /isolate="71704723" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <182..>3098 FT /gene="HLA-A" FT /allele="HLA-A*68" FT mRNA join(<182..254,385..654,896..1171,1772..2047,2147..2263, FT 2702..2734,2877..2924,3094..>3098) FT /gene="HLA-A" FT /allele="HLA-A*68" FT /product="MHC class I antigen" FT CDS join(182..254,385..654,896..1171,1772..2047,2147..2263, FT 2702..2734,2877..2924,3094..3098) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*68" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A3G5BD33" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A3G5BD33" FT /protein_id="AYV97552.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGYGTFQKWVAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3195 BP; 615 A; 921 C; 978 G; 681 T; 0 other; gtttcttttc tccctctccc aacctatgta gggtccttct tcctggatac tcacgacgcg 60 gacccagttc tcactcccat tgggtgtcgg gtttccagag aagccaatca gtgtcgtcgc 120 ggtcgcggtt ctaaagtccg cacgcaccca ccgggactca gattctcccc agacgccgag 180 gatggccgtc atggcgcccc gaaccctcgt cctgctactc tcgggggccc tggccctgac 240 ccagacctgg gcgggtgagt gcggggtcgg gagggaaacg gcctctgtgg ggagaagcaa 300 ggggcccgcc cggcgggggc gcaggacccg ggaagccgcg cctggaggag ggtcgggcgg 360 gtctcagcca ctcctcgccc ccaggctccc actccatgag gtatttctac acctccgtgt 420 cccggcccgg ccgcggggag ccccgcttca tcgccgtggg ctacgtggac gacacgcagt 480 tcgtgcggtt cgacagcgac gccgcgagcc agaggatgga gccgcgggcg ccgtggatag 540 agcaggaggg gccggagtat tgggaccgga acacacggaa tgtgaaggcc cagtcacaga 600 ctgaccgagt ggacctgggg accctgcgcg gctactacaa ccagagcgag gccggtgagt 660 gaccccggcc cggggcgcag gtcacgaccc ctcatccccc acggacgggc caggtcgccc 720 acagtctccg ggtccgagat ccgccccgaa gccgcgggac cccgagaccc ttgccccggg 780 agaggcccag gcgcctttac ccggtttcat tttcagttta ggccaaaaat ccccccgggt 840 tggtcggggc ggggcggggc tcgggggacc gggctgacct cggggtccgg gccaggttct 900 cacaccatcc agatgatgta tggctgcgac gtggggtcgg acgggcgctt cctccgcggg 960 taccggcagg acgcctacga cggcaaggat tacatcgccc tgaaagagga cctgcgctct 1020 tggaccgcgg cggacatggc agctcagacc accaagcaca agtgggaggc ggcccatgtg 1080 gcggagcagt ggagagccta cctggagggc acgtgcgtgg agtggctccg cagatacctg 1140 gagaacggga aggagacgct gcagcgcacg ggtaccaggg gccacggggc gcctccctga 1200 tcgcctgtag atctcccggg ctggcctccc acaaggaggg gagacaattg ggaccaacac 1260 tagaatatcg ccctccctct ggtcctgagg gagaggaatc ctcctgggtt tccagatcct 1320 gtaccagaga gtgactctga ggttccgccc tgctctctga cacaattaag ggataaaatc 1380 tctgaaggaa tgacgggaag acgatccctc gaatactgat gagtggttcc ctttgacaca 1440 cacaggcagc agccttgggc ccgtgacttt tcctctcagg ccttgttctc tgcttcacac 1500 tcaatgtgtg tgggggtctg agtccagcac ttctgagtcc ctcagcctcc actcaggtca 1560 ggaccagaag tcgctgttcc ctcttcaggg actagaattt tccacggaat aggagattat 1620 cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc tcccttcccc atcccaggtg 1680 tcctgtccat tctcaagata gccacatgtg tgctggagga gtgtcccatg acagatgcaa 1740 aatgcctgaa tgatctgact cttcctgaca gacgccccca aaacgcatat gactcaccac 1800 gctgtctctg accatgaagc caccctgagg tgctgggccc tgagcttcta ccctgcggag 1860 atcacactga cctggcagcg ggatggggag gaccagaccc aggacacgga gctcgtggag 1920 accaggcctg cagggtatgg aaccttccag aagtgggtgg ctgtggtggt gccttctgga 1980 caggagcaga gatacacctg ccatgtgcag catgagggtt tgcccaagcc cctcaccctg 2040 agatggggta aggagggaga cgggggtgtc atgtctttta gggaaagcag gagcctctct 2100 gacctttagc agggtcaggg cccctcacct tcccctcttt tcccagagcc gtcttcccag 2160 cccaccatcc ccatcgtggg catcattgct ggcctggttc tctttggagc tgtgatcact 2220 ggagctgtgg tcgctgctgt gatgtggagg aggaagagct caggtgggga aggggtgaag 2280 ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2340 gcctcgttac tgggaagcac cacccacaat tatgggccta cccagcctgg gccctgtgtg 2400 ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2460 tacagcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2520 ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2580 ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2640 ctctaggacc ttaaggccct gactcctttc tggtatctca caggacattt tcttcccaca 2700 gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg 2760 aggtccttgg gatattgtgt ttgggagccc atgggggagc tcacccaccc cacaattcct 2820 cctctagcca catcttctgt gggatctgac caggttctgt ttttgttcta ccccaggcag 2880 tgacagtgcc cagggctctg atgtgtctct cacagcttgt aaaggtgaga gcctggaggg 2940 cctgatgtgt gttgggtgtt gggcggaaca gtggacacag ctgtgctatg gggtttcttt 3000 ccattggatg tattgagcat gcgatgggct gtttaaagtg tgacccctca ctgtgacaga 3060 tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3120 gagaggcaag agttgttcct gcccttccct ttgtgacttg aagaaccctg actttgtttc 3180 tgcaaaggca cctgc 3195 //