Dbfetch

ID   MG905190; SV 1; linear; genomic DNA; STD; HUM; 3034 BP.
XX
AC   MG905190;
XX
DT   08-OCT-2018 (Rel. 138, Created)
DT   08-OCT-2018 (Rel. 138, Last updated, Version 1)
XX
DE   Homo sapiens isolate BY01543 MHC class I antigen (HLA-A) gene,
DE   HLA-A*68:01:02:04 allele, complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-3034
RA   Hou L., Lazaro A., Enriquez E., Persaud M., Hurley C., Steiner N.;
RT   "Netherlands population study";
RL   Unpublished.
XX
RN   [2]
RP   1-3034
RA   Hou L., Lazaro A., Enriquez E., Persaud M., Hurley C., Steiner N.;
RT   ;
RL   Submitted (02-FEB-2018) to the INSDC.
RL   Department of Oncology, Georgetown University Medical Center, CW Bill Young
RL   Marrow Donor Recruitment and Research Program, Georgetown University, 11333
RL   Woodglen Drive, Room 337, Rockville, MD 20852, USA
XX
DR   MD5; c0897307d03ee70ad8d03fe0f1d4acdf.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Assign TruSight HLA-v2.1 v. V2.1
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3034
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /isolate="BY01543"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>3034
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*68:01:02:04"
FT   mRNA            join(<1..189,320..589,831..1106,1707..1982,2082..2198,
FT                   2637..2669,2812..2859,3029..>3034)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*68:01:02:04"
FT                   /product="MHC class I antigen"
FT   CDS             join(117..189,320..589,831..1106,1707..1982,2082..2198,
FT                   2637..2669,2812..2859,3029..3033)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*68:01:02:04"
FT                   /product="MHC class I antigen"
FT                   /note="HLA class I histocompatibility antigen"
FT                   /db_xref="GOA:B1PKZ2"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:B1PKZ2"
FT                   /protein_id="AYE21454.1"
FT                   /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
FT                   LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA
FT                   AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT                   GGSYSQAASSDSAQGSDVSLTACKV"
XX
SQ   Sequence 3034 BP; 589 A; 871 C; 942 G; 632 T; 0 other;
     agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg        60
     cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg       120
     ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggccctggcc ctgacccaga       180
     cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaaggggc       240
     ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg aggagggtcg ggcgggtctc       300
     agccactcct cgcccccagg ctcccactcc atgaggtatt tctacacttc cgtgtcccgg       360
     cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg       420
     cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag       480
     gaggggccgg agtattggga ccggaacaca cggaatgtga aggcccagtc acagactgac       540
     cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc       600
     cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt       660
     ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg       720
     cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc       780
     ggggcggggc ggggctcgag ggaccgggct gacctcgggg tccgggccag gttctcacac       840
     catccagatg atgtatggct gcgacgtggg gtcggacggg cgcttcctcc gcgggtaccg       900
     gcaggacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac       960
     cgcggcggac atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga      1020
     gcagtggaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa      1080
     cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc      1140
     tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa      1200
     tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc      1260
     agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga      1320
     aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag      1380
     gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat      1440
     gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc      1500
     agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag      1560
     gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg      1620
     tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc      1680
     ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt      1740
     ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac      1800
     actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag      1860
     gcctgcaggg gatggaacct tccagaagtg ggtggctgtg gtggtgcctt ctggacagga      1920
     gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg      1980
     gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct      2040
     ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac      2100
     catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc      2160
     tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg      2220
     gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc      2280
     gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc      2340
     acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag      2400
     cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc      2460
     aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg      2520
     ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta      2580
     ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag      2640
     aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc      2700
     cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct      2760
     agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca      2820
     gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga      2880
     tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt      2940
     ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga      3000
     atttgttcat gaatattttt ttctatagtg tgag                                  3034
//