Dbfetch
ID MG905190; SV 1; linear; genomic DNA; STD; HUM; 3034 BP.
XX
AC MG905190;
XX
DT 08-OCT-2018 (Rel. 138, Created)
DT 08-OCT-2018 (Rel. 138, Last updated, Version 1)
XX
DE Homo sapiens isolate BY01543 MHC class I antigen (HLA-A) gene,
DE HLA-A*68:01:02:04 allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3034
RA Hou L., Lazaro A., Enriquez E., Persaud M., Hurley C., Steiner N.;
RT "Netherlands population study";
RL Unpublished.
XX
RN [2]
RP 1-3034
RA Hou L., Lazaro A., Enriquez E., Persaud M., Hurley C., Steiner N.;
RT ;
RL Submitted (02-FEB-2018) to the INSDC.
RL Department of Oncology, Georgetown University Medical Center, CW Bill Young
RL Marrow Donor Recruitment and Research Program, Georgetown University, 11333
RL Woodglen Drive, Room 337, Rockville, MD 20852, USA
XX
DR MD5; c0897307d03ee70ad8d03fe0f1d4acdf.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign TruSight HLA-v2.1 v. V2.1
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3034
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="BY01543"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3034
FT /gene="HLA-A"
FT /allele="HLA-A*68:01:02:04"
FT mRNA join(<1..189,320..589,831..1106,1707..1982,2082..2198,
FT 2637..2669,2812..2859,3029..>3034)
FT /gene="HLA-A"
FT /allele="HLA-A*68:01:02:04"
FT /product="MHC class I antigen"
FT CDS join(117..189,320..589,831..1106,1707..1982,2082..2198,
FT 2637..2669,2812..2859,3029..3033)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*68:01:02:04"
FT /product="MHC class I antigen"
FT /note="HLA class I histocompatibility antigen"
FT /db_xref="GOA:B1PKZ2"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:B1PKZ2"
FT /protein_id="AYE21454.1"
FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALKEDLRSWTAADMA
FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT GGSYSQAASSDSAQGSDVSLTACKV"
XX
SQ Sequence 3034 BP; 589 A; 871 C; 942 G; 632 T; 0 other;
agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60
cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120
ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggccctggcc ctgacccaga 180
cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaaggggc 240
ccgcccggcg ggggcgcagg acccgggaag ccgcgcctgg aggagggtcg ggcgggtctc 300
agccactcct cgcccccagg ctcccactcc atgaggtatt tctacacttc cgtgtcccgg 360
cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg 420
cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag 480
gaggggccgg agtattggga ccggaacaca cggaatgtga aggcccagtc acagactgac 540
cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc 600
cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt 660
ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg 720
cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc 780
ggggcggggc ggggctcgag ggaccgggct gacctcgggg tccgggccag gttctcacac 840
catccagatg atgtatggct gcgacgtggg gtcggacggg cgcttcctcc gcgggtaccg 900
gcaggacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac 960
cgcggcggac atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga 1020
gcagtggaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa 1080
cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1140
tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1200
tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1260
agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1320
aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag 1380
gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1440
gtgtgtgggg gtctgagtcc agcacttctg agtccctcag cctccactca ggtcaggacc 1500
agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag 1560
gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg 1620
tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc 1680
ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt 1740
ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 1800
actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 1860
gcctgcaggg gatggaacct tccagaagtg ggtggctgtg gtggtgcctt ctggacagga 1920
gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg 1980
gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct 2040
ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac 2100
catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc 2160
tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg 2220
gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc 2280
gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc 2340
acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag 2400
cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc 2460
aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg 2520
ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta 2580
ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag 2640
aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc 2700
cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct 2760
agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca 2820
gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga 2880
tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt 2940
ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga 3000
atttgttcat gaatattttt ttctatagtg tgag 3034
//