Dbfetch
ID MG845550; SV 1; linear; genomic DNA; STD; HUM; 2975 BP. XX AC MG845550; XX DT 15-JUN-2018 (Rel. 137, Created) DT 15-JUN-2018 (Rel. 137, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*07:new allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2975 RA Bettinotti M.P., Ferriola D., Duke J., Mosbruger T., Jennings L., Turan N., RA Kalman L., Monos D.; RT "CDC's Genetic Testing Reference Materials Program: The characterization of RT 108 DNA samples for 11 HLA Loci"; RL Unpublished. XX RN [2] RP 1-2975 RA Bettinotti M.P., Ferriola D., Duke J., Mosbruger T., Jennings L., Turan N., RA Kalman L., Monos D.; RT ; RL Submitted (25-JAN-2018) to the INSDC. RL Immunogenetics Laboratory, The Children's Hospital of Philadelphia, 3615 RL Civic Center Blvd., Abramson Research Bldg, Room 707B, Philadelphia, PA RL 19104, USA XX DR MD5; 21f0bd11969680ebc922f81927294031. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDx v. 2.6.0; Twin v. 2.1.2 CC Assembly Name :: IMGT/HLA v. 3.28 CC Coverage :: 5'UTR to 3'UTR CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2975 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..2975 FT /gene="HLA-C" FT /allele="HLA-C*07:new" FT mRNA join(1..135,266..535,786..1061,1649..1924,2049..2168, FT 2609..2641,2749..2796,2961..2975) FT /gene="HLA-C" FT /allele="HLA-C*07:new" FT /product="MHC class I antigen" FT 5'UTR 1..62 FT /gene="HLA-C" FT /allele="HLA-C*07:new" FT CDS join(63..135,266..535,786..1061,1649..1924,2049..2168, FT 2609..2641,2749..2796,2961..2965) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*07:new" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2U9K714" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2U9K714" FT /protein_id="AWS21622.1" FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN FT LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHMQHEGLQEPLTLSWEPFSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG FT KGGSCSQAACSNSAQGSDESLITCKA" FT 3'UTR 2966..2975 FT /gene="HLA-C" FT /allele="HLA-C*07:new" XX SQ Sequence 2975 BP; 555 A; 875 C; 941 G; 604 T; 0 other; gcagtcccgg ttctaaagtc cccagtcacc cacccggact cacattctcc ccagaggccg 60 agatgcgggt catggcgccc cgagccctcc tcctgctgct ctcgggaggc ctggccctga 120 ccgagacctg ggcctgtgag tgcggggttg ggagggaagc ggcctctgcg gagaggagcg 180 aggggccctc ccggcgaggg cgcaggaccc ggggagccgc gcagggaggt gggtcgggcg 240 ggtctcagcc cctcctcgcc cccaggctcc cactccatga ggtatttcga caccgccgtg 300 tcccggcccg gccgcggaga gccccgcttc atctcagtgg gctacgtgga cgacacgcag 360 ttcgtgcggt tcgacagcga cgccgcgagt ccgagagggg agccgcgggc gccgtgggtg 420 gagcaggagg ggccggagta ttgggaccgg gagacacaga agtacaagcg ccaggcacag 480 gctgaccgag tgagcctgcg gaacctgcgc ggctactaca accagagcga ggacggtgag 540 tgaccccggc ccggggcgca ggtcacgacc cctccccatc ccccacggac ggcccgggtc 600 gcccagagtc tccccgtctg agatccaccc caaggtggat ctgcggaacc cgcccagacc 660 ctcgaccgga gagagcccca gtcgccttta cccggtttca ttttcggttt aggccaaaat 720 ccccgcgggt tggtcggggc ggggcggggc tcgggggact gggctgaccg cgggggcggg 780 gccagggtct cacaccctcc agaggatgtc tggctgcgac ctggggcccg acgggcgcct 840 cctccgcggg tatgaccagt ccgcctacga cggcaaggat tacatcgccc tgaacgagga 900 cctgcgctcc tggaccgccg cggacaccgc ggctcagatc acccagcgca agttggaggc 960 ggcccgtgcg gcggagcagc tgagagccta cctggagggc acgtgcgtgg agtggctccg 1020 cagatacctg gagaacggga aggagacgct gcagcgcgca ggtaccaggg gcagtgggga 1080 gccttcccca tctcctatag atctcccggg atggcctccc acgaggaggg gaggaaaatg 1140 ggatcagcac tggaatatcg ccctcccttg aatggagaat ggcatgagtt ttcctgagtt 1200 tcctctgagg gccccctctg ctctctagga caattaaggg atgaagtctc tgaggaaatg 1260 gaggggaaga cagtccctgg aatactgatc aggggtctcc tttgaccact ttgaccactg 1320 cagcagctgt ggtcaggctg ctgacctttc tctcaggcct tgttctctgc ctcacactca 1380 atgtgtctga aggtttgatt ccagcttttc tgagtcctgc agcctccact caggtcagga 1440 ccagaagtcg ctgttcctcc ctcagagact agaactttcc aatgaatagg agattatccc 1500 aggtgcctgt gtccaggctg gcgtctgggt tctgtgccgc cttccccacc ccaggtgtcc 1560 tgtccattct caggatggtc acatgggcgc tgctggagtg tcccaagaga gatgcaaagt 1620 gtctgaattt tctgactctt cccgtcagaa cccccaaaga cacacgtgac ccaccacccc 1680 ctctctgacc atgaggccac cctgaggtgc tgggccctgg gcttctaccc tgcggagatc 1740 acactgacct ggcagcggga tggggaggac cagacccagg acaccgagct tgtggagacc 1800 aggccagcag gagatggaac cttccagaag tgggcagctg tggtggtgcc ttctggacaa 1860 gagcagagat acacgtgcca tatgcagcac gaggggctgc aagagcccct caccctgagc 1920 tggggtaagg aggggaatgg ggggtcacat ctcttatcag agaaagcaga agtccttctg 1980 gagcccttca gccgggtcag ggctgaggct tgggggtcag ggcccctcac cttctcctcc 2040 tttcccagag ccattttccc agcccaccat ccccatcatg ggcatcgttg ctggcctggc 2100 tgtcctggtt gtcctagctg tccttggagc tgtggtcacc gctatgatgt gtaggaggaa 2160 gagctcaggt agggaagggg tgaagagcgg ggtctgggtt ttcttgtccc actgggagtt 2220 tcaagcccca ggtagaagtg tgccccgcct tgttactgga agcaccatcc acacatgggc 2280 catcccagcc tgggaccctg tgtgccagca cttactcttt tgtgaagcac atgtgacaat 2340 gaaggacgga tgtatcacct tgatgattat ggtgttgggg tcctgattcc agcattcatg 2400 agtcagggga aggtccctgc taaggacaga ccttaggagg gcagttggtc cagaacccac 2460 aactgctttc cccatgtttc ctgatcctgc cctgggtctg cagtcgtagt tctggaaact 2520 tctcttgggt ccaagactag gaggttcccc taagatcaca tggccctgcc tcctcccagt 2580 cccctcatag ggcattttct tcccacaggt ggaaaaggag ggagctgctc tcaggctgcg 2640 tgtaagtgat ggcggcgggc gtgtggagga gctcacctac tccataattc ctcttgtccc 2700 acatctcctg cgggctctga ccaggtcttt ttttttgttc taccccaggc agcaacagtg 2760 cccagggctc tgatgagtct ctcatcactt gtaaaggtga gattctgggg agctgaagtg 2820 gtcgggggtg gggcagaggg aaaaggcctg ggtaatgggg attctttgat tgggacgttt 2880 cgagtgtgtg gtgggccgtt cagagtgtca tcgcttacca tgactgacct gaatttgttc 2940 atgactattg tgttctgtag cctgagacag ctgcc 2975 //