Dbfetch

Dbfetch

ID   MG844183; SV 1; linear; genomic DNA; STD; HUM; 863 BP.
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AC   MG844183;
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DT   11-OCT-2018 (Rel. 138, Created)
DT   11-OCT-2018 (Rel. 138, Last updated, Version 1)
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DE   Homo sapiens isolate 20161018dqe3 MHC class II antigen (HLA-DQB1) gene,
DE   HLA-DQB1*06var allele, partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-863
RA   Fuerst D., Tsamadou C., Neuchel C., Mytilineos J.;
RT   "HLA-DQB1*06var, a novel HLA-DQB1*06 variant";
RL   Unpublished.
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RN   [2]
RP   1-863
RA   Fuerst D., Tsamadou C., Neuchel C., Mytilineos J.;
RT   ;
RL   Submitted (26-JAN-2018) to the INSDC.
RL   Transplant Immunology, Institute for Clinical Transfusion Medicine Ulm,
RL   Helmholtzstr.10, Ulm, BW 89077, Germany
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DR   MD5; 277f0349c626af5cce0a59b6710e9095.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..863
FT                   /organism="Homo sapiens"
FT                   /isolate="20161018dqe3"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="Blood"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>863
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06var"
FT   mRNA            join(<1..270,371..652,753..>863)
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06var"
FT                   /product="MHC class II antigen"
FT   CDS             join(<1..270,371..652,753..>863)
FT                   /codon_start=3
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06var"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:A0A386RVZ8"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:A0A386RVZ8"
FT                   /protein_id="AYE67218.1"
FT                   /translation="DFVYQFKGMCYFTNGTERVRLVTRHIYNREEYARFDSDVGVYRAV
FT                   TPQGRPDAEYWNSQKEVLEGTRAELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEAL
FT                   NHHNLLVCSVTDFYPGQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQCG
FT                   DVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQK"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   gap             653..752
FT                   /estimated_length=unknown
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SQ   Sequence 863 BP; 143 A; 179 C; 212 G; 129 T; 200 other;
     aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggacg gagcgcgtgc        60
     gtcttgtaac cagacacatc tataaccgag aggagtacgc gcgcttcgac agcgacgtgg       120
     gggtgtaccg cgcggtgacg ccgcaggggc ggcctgatgc cgagtactgg aacagccaga       180
     aggaagtcct ggaggggacc cgggcggagt tggacacggt gtgcagacac aactacgagg       240
     tggcgttccg cgggatcttg cagaggagag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn tggagcccac agtgaccatc tccccatcca ggacagaggc cctcaaccac       420
     cacaacctgc tggtctgctc ggtgacagat ttctatccag gccagatcaa agtccggtgg       480
     tttcggaatg atcaggagga gacagccggc gttgtgtcca ccccccttat taggaatggt       540
     gactggactt tccagatcct ggtgatgctg gaaatgactc cccagtgtgg agatgtctac       600
     acctgccacg tggagcaccc cagcctccag agccccatca ccgtggagtg gcnnnnnnnn       660
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nngggctcag tctgaatctg cccagagcaa       780
     gatgctgagt ggcgttggag gcttcgtgct ggggctgatc ttccttgggc tgggccttat       840
     catccgtcaa aggagtcaga aag                                               863
//