Dbfetch
ID MG787292; SV 1; linear; genomic DNA; STD; HUM; 3359 BP. XX AC MG787292; XX DT 20-FEB-2018 (Rel. 135, Created) DT 20-FEB-2018 (Rel. 135, Last updated, Version 1) XX DE Homo sapiens isolate NT02000 MHC class I antigen (HLA-C) gene, DE HLA-C*04:04:01 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3359 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [2] RP 1-3359 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (12-JAN-2018) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, United States of America XX DR MD5; 6f1fe9f3d969647350236775633012a8. XX FH Key Location/Qualifiers FH FT source 1..3359 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT02000" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <295..>3189 FT /gene="HLA-C" FT /allele="HLA-C*04:04:01" FT mRNA join(<295..367,498..767,1014..1289,1877..2152,2274..2393, FT 2833..2865,2973..3020,3185..>3189) FT /gene="HLA-C" FT /allele="HLA-C*04:04:01" FT /product="MHC class I antigen" FT CDS join(295..367,498..767,1014..1289,1877..2152,2274..2393, FT 2833..2865,2973..3020,3185..3189) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*04:04:01" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A1Z2RTR7" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A1Z2RTR7" FT /protein_id="AVC68953.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" XX SQ Sequence 3359 BP; 633 A; 974 C; 1050 G; 702 T; 0 other; aggagaagag gaatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60 tccaagggcc gtgtctgcac tggggaggcg ccgcgttggg gattctccac tcccctgagt 120 ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180 aattcccact cccattgggt gtcgggttct agagaagcca atcagcgtct ccgcagtccc 240 ggttctaaag tccccagtca cccacccgga ctcagattct ccccagacgc cgagatgcgg 300 gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccctggccct gaccgagacc 360 tgggccggtg agtgcggggt tgggagggaa acggcctctg gggagaggag cgaggggccc 420 gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480 ccactcctcg tccccaggct cccactccat gaggtatttc tccacatccg tgtcctggcc 540 cggccgcggg gagccccgct tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600 gttcgacagc gacgccgcga gtccaagagg ggagccgcgg gagccgtggg tggagcagga 660 ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac aggctgaccg 720 agtgaacctg cggaaactgc gcggctacta caaccagagc gaggacggtg agtgaccccg 780 gcccggggcg caggtcacga cccctcccca tcccccacgg acggcccggg tcgccccgag 840 tctccccgtc tgagatccac cccgaggctg cggaacccgc ccagaccctc gaccggagag 900 agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960 tcgggactgg ggcggggctc gggggaccgg gctgaccacg ggggcggggc cagggtctca 1020 caccctccag aggatgtttg gctgcgacct ggggccggac gggcgcctcc tccgcgggta 1080 taaccagttc gcctacgacg gcaaggatta catcgccctg aacgaggatc tgcgctcctg 1140 gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgaggc 1200 ggagcagctg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260 gaacgggaag gagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc 1320 tcccgtagat ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcgcta 1380 gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt cctgagtttc ctctgagggc 1440 cccctctgct ctctaggaca attaagggat gaagtccttg aggaaatgga ggggaagaca 1500 gtccctggaa tactgatcag gggtcccctt tgaccacttt gaccactgca gcagctgtgg 1560 tcaggctgct gacctttctc tcaggccttg ttctctgcct gacgctcaat gtgtttgaag 1620 gtttgattcc agcttttctg agtccttcgg cctccactca ggtcaggacc agaagtcgct 1680 gttcctccct cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt 1740 ccaggctggc gtctgggttc tgtgccccct tccccacccc aggtgtcctg tccattctca 1800 ggatggtcac atgggcgctg ttggagtgtc gcaagagaga tacaaagtgt ctgaattttc 1860 tgactcttcc catcagaaca cccaaagaca cacgtgaccc accatcccgt ctctgaccat 1920 gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg 1980 cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag gccagcagga 2040 gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac 2100 acgtgccatg ttcagcacga ggggctgccg gagcccctca ccctgagatg gagtaaggag 2160 ggggatgagg ggtgatgtgt cttctcaggg aaagcagaag tcctggagcc cttcagccgg 2220 gtcagggctg aggcttggag gtcagggccc ctcaccttcc cctcctttcc cagagccgtc 2280 ttcccagccc accatcccca tcgtgggcat cgttgctggc ctggctgtcc tggctgtcct 2340 agctgtccta ggagctatgg tggctgttgt gatgtgtagg aggaagagct caggtaggga 2400 aggggtgagg agtggggtct gggttttctt gttccactgg gagtttcaag ccccaggtag 2460 aagtgtgccc cacctcgtta ctggaagcac catccacaca tgggccatcc cagcctggga 2520 ccctgtgtgc cagcacttac tctgttgtga agcacatgac aatgaaggac agatgtatca 2580 ccttgatgat tatggtgttg gggtccttga ttccagcatt catgagtcag gggaaggtcc 2640 ctgctaagga cagaccttag gagggcagtt gcttcagaac ccacagctgc tttccccgtg 2700 tttcctgatc ctgccctggg tctgcagtca tagttctgga aacttctctt gggtccaaga 2760 ctaggaggtt cccctaagat cgcatggccc tgcctcctcc ctgtcccctc acagggcatt 2820 ttcttcccac aggtggaaaa ggagggagct gctctcaggc tgcgtgtaag tgatggcggt 2880 gggcgtgtgg aggagctcac ccaccccata attcctcttg tcccacatct cctgcgggct 2940 ctgaccaggt cttttttttt gttctacccc agccagcaac agtgcccagg gctctgatga 3000 gtctctcatc gcttgtaaag gtgagattct ggggagctga agtggtcggg ggtggggcag 3060 agggaaaagg cctaggtaat ggggatcctt tgattgggac gtttcgaatg tgtggtgagc 3120 tgttcagagt gtcatcactt accatgactg acctgaattt gttcatgact attgtgttct 3180 gtagcctgag acagctgcct gtgtgggact gagatgcagg atttcttcac acctctcctt 3240 tgtgacttca agagcctctg gcatctcttt ctgcaaaggc atctgaatgt gtctgcgttc 3300 ctgttagcat aatgtgagga ggtggagaga cagcccaccc ccgtgtccac cgtgacccc 3359 //