Dbfetch

ID   MG779947; SV 1; linear; genomic DNA; STD; HUM; 3333 BP.
XX
AC   MG779947;
XX
DT   24-FEB-2018 (Rel. 135, Created)
DT   24-FEB-2018 (Rel. 135, Last updated, Version 1)
XX
DE   Homo sapiens isolate BY01515 MHC class I antigen (HLA-A) gene,
DE   HLA-A*02:01:01 allele, complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-3333
RA   Hou L., Lazaro A., Enriquez E., Perdaud M., Hurley C.;
RT   "Matchis Population study -Netherlands";
RL   Unpublished.
XX
RN   [2]
RP   1-3333
RA   Hou L., Lazaro A., Enriquez E., Perdaud M., Hurley C.;
RT   ;
RL   Submitted (10-JAN-2018) to the INSDC.
RL   School of Medicine, Georgetown University, 11333 Woodglen Drive, Rockville,
RL   MD 20852, USA
XX
DR   MD5; 9bb2e30519c5e54662605dca3dd23666.
DR   Ensembl-Gn; ENSG00000235657; homo_sapiens.
DR   Ensembl-Tr; ENST00000457879; homo_sapiens.
DR   Ensembl-Tr; ENST00000547271; homo_sapiens.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Assign TruSight HLA v. v2.1
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3333
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /isolate="BY01515"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   gene            <117..>3033
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:01:01"
FT   mRNA            join(<117..189,320..589,831..1106,1707..1982,2082..2198,
FT                   2637..2669,2812..2859,3029..>3033)
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:01:01"
FT                   /product="MHC class I antigen"
FT   CDS             join(117..189,320..589,831..1106,1707..1982,2082..2198,
FT                   2637..2669,2812..2859,3029..3033)
FT                   /codon_start=1
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:01:01"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:Q53Z42"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q53Z42"
FT                   /protein_id="AVE16196.1"
FT                   /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
FT                   LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA
FT                   AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT                   ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK
FT                   GGSYSQAASSDSAQGSDVSLTACKV"
XX
SQ   Sequence 3333 BP; 645 A; 955 C; 1009 G; 724 T; 0 other;
     agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg        60
     cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg       120
     ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggctctggcc ctgacccaga       180
     cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaacgggc       240
     ccgcctggcg ggggcgcagg acccgggaag ccgcgccggg aggagggtcg ggcgggtctc       300
     agccactcct cgtccccagg ctctcactcc atgaggtatt tcttcacatc cgtgtcccgg       360
     cccggccgcg gggagccccg cttcatcgca gtgggctacg tggacgacac gcagttcgtg       420
     cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag       480
     gagggtccgg agtattggga cggggagaca cggaaagtga aggcccactc acagactcac       540
     cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc       600
     cggcccgggg cgcaggtcac gacctctcat cccccacgga cgggccaggt cgcccacagt       660
     ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg       720
     cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc caggttggtc       780
     ggggcggggc ggggctcggg ggaccgggct gaccgcgggg tccgggccag gttctcacac       840
     cgtccagagg atgtatggct gcgacgtggg gtcggactgg cgcttcctcc gcgggtacca       900
     ccagtacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac       960
     cgcggcggac atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga      1020
     gcagttgaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa      1080
     cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc      1140
     tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa      1200
     tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc      1260
     agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga      1320
     aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag      1380
     gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat      1440
     gtgtgtgggg gtctgagtcc agcacttctg agtccttcag cctccactca ggtcaggacc      1500
     agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag      1560
     gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg      1620
     tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc      1680
     ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt      1740
     ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac      1800
     actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag      1860
     gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggacagga      1920
     gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg      1980
     gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct      2040
     ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac      2100
     catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc      2160
     tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg      2220
     gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc      2280
     gttactggga agcaccaccc acaattatgg gcctacccat cctgggccct gtgtgccagc      2340
     acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag      2400
     cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc      2460
     aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg      2520
     ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta      2580
     ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag      2640
     aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc      2700
     cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct      2760
     agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca      2820
     gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga      2880
     tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt      2940
     ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga      3000
     atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag      3060
     gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa      3120
     aggcacctgc atgtgtctgt gttcgtgtag gcataatgtg aggaggtggg gagaccaccc      3180
     cacccccatg tccaccatga ccctcttccc acgctgacct gtgctccctc cccaatcatc      3240
     tttcctgttc cagagaggtg gggctgaggt gtctccatct ctgtctcaac ttcatggtgc      3300
     actgagctgt aacttcttcc ttccctatta aaa                                   3333
//