Dbfetch
ID MG747483; SV 1; linear; genomic DNA; STD; HUM; 3359 BP.
XX
AC MG747483;
XX
DT 16-FEB-2018 (Rel. 135, Created)
DT 16-FEB-2018 (Rel. 135, Last updated, Version 1)
XX
DE Homo sapiens isolate NT01905 MHC class I antigen (HLA-C) gene, HLA-C*14:04
DE allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3359
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT "Novel HLA Class I alleles";
RL Unpublished.
XX
RN [2]
RP 1-3359
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT ;
RL Submitted (02-JAN-2018) to the INSDC.
RL Oncology, C.W. Bill Young DoD Marrow Donor Recruitment and Research
RL Program, 11333 Woodglen Dr, Rockville, MD 20852, USA
XX
DR MD5; 564a3f2adec5f172db154f98cd99041a.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v.
CC V2.7.0.9307; Sequencher v. V5.4.6
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3359
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT01905"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <295..>3189
FT /gene="HLA-C"
FT /allele="HLA-C*14:04"
FT mRNA join(<295..367,498..767,1014..1289,1877..2152,2274..2393,
FT 2833..2865,2973..3020,3185..>3189)
FT /gene="HLA-C"
FT /allele="HLA-C*14:04"
FT /product="MHC class I antigen"
FT CDS join(295..367,498..767,1014..1289,1877..2152,2274..2393,
FT 2833..2865,2973..3020,3185..3189)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*14:04"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A1W1B5Q6"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A1W1B5Q6"
FT /protein_id="AUZ98375.1"
FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFSTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRN
FT LRGYYNQSEAGSHTLQWMFGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
XX
SQ Sequence 3359 BP; 623 A; 981 C; 1055 G; 700 T; 0 other;
aggagaagag ggatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag gattctccac tcccctgagt 120
ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180
aattcccact cccattgggt gtcgggttct agagaagcca atcagcgtct ccgcagtccc 240
ggttctaaag tccccagtca cccacccgga ctcagattct ccccagacgc cgagatgcgg 300
gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccctggccct gaccgagacc 360
tgggcctgtg agtgcggggt taggagggaa acggcctctg cggagaggag cgaggggccc 420
gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480
ccactcctcg tccccaggct cccactccat gaggtatttc tccacatccg tgtcccggcc 540
cggccgcggg gagccccgct tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600
gttcgacagc gacgccgcga gtccgagagg ggagccgcgg gcgccgtggg tggagcagga 660
ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac aggctgaccg 720
agtgaacctg cggaacctgc gcggctacta caaccagagc gaggccggtg agtgaccccg 780
gcccggggcg caggtcacga cccctcccca tcccccacgg acggcccggg tcgccccgag 840
tctccccgtc tgagatccac cccgaggctg cggaacccgc ccagaccctc gaccggagag 900
agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960
tcgggactgg ggcggggctc gggggacggg gctgaccacg ggggcggggc cagggtctca 1020
caccctccag tggatgtttg gctgcgacct ggggcccgac gggcgcctcc tccgcgggta 1080
tgaccagtcc gcctacgacg gcaaggatta catcgccctg aacgaggatc tgcgctcctg 1140
gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgaggc 1200
ggagcagcgg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260
gaacgggaag gagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc 1320
tcccgtagat ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcgcta 1380
gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt cctgagtttc ctctgagggc 1440
cccctctgct ctctaggaca attaagggat gaagtccttg aggaaatgga ggggaagaca 1500
gtccctggaa tactgatcag gggtcccctt tgaccacttt gaccactgca gcagctgtgg 1560
tcaggctgct gacctttctc tcaggccttg ttctctgcct cacgctcaat gtgtttgaag 1620
gtttgattcc agcttttctg agtccttcgg cctccactca ggtcaggacc agaagtcgct 1680
gttcctccct cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt 1740
ccaggctggc gtctgggttc tgtgccccct tccccacccc aggtgtcctg tccattctca 1800
ggatggtcac atgggcgctg ttggagtgtc gcaagagaga tacaaagtgt ctgaattttc 1860
tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc accatcccgt ctctgaccat 1920
gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg 1980
cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag gccagcagga 2040
gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac 2100
acgtgccatg tgcagcacga ggggctgccg gagcccctca ccctgagatg gggtaaggag 2160
ggggatgagg ggtgatgtgt cttctcaggg aaagcagaag tcctggagcc cttcagccgg 2220
gtcagggctg aggcttggag gtcagggccc ctcaccttcc cctcctttcc cagagccgtc 2280
ttcccagccc accatcccca tcgtgggcat cgttgctggc ctggctgtcc tggctgtcct 2340
agctgtccta ggagctgtgg tggctgttgt gatgtgtagg aggaagagct caggtaggga 2400
aggggtgagg agtggggtct gggttttctt gttccactgg gagtttcaag ccccaggtag 2460
aagtgtgccc cacctcgtta ctggaagcac catccacaca tgggccatcc cagcctggga 2520
ccctgtgtgc cagcacttac tctgttgtga agcacatgac aatgaaggac agatgtatca 2580
ccttgatgat tatggtgttg gggtccttga ttccagcatt catgagtcag gggaaggtcc 2640
ctgctaagga cagaccttag gagggcagtt gcttcaggac ccacagctgc tttccccgtg 2700
tttcctgatc ctgccctggg tctgcagtca tagttctgga aacttctctt gggtccaaga 2760
ctaggaggtt cccctaagat cgcatggccc tgcctcctcc ctgtcccctc acagggcatt 2820
ttcttcccac aggtggaaaa ggagggagct gctctcaggc tgcgtgtaag tgatggcggt 2880
gggcgtgtgg aggagctcac ccaccccata attcctcttg tcccacatct cctgcgggct 2940
ctgaccaggt cttttttttt gttctacccc agccagcaac agtgcccagg gctctgatga 3000
gtctctcatc gcttgtaaag gtgagattct ggggagctga agtggtcggg ggtggggcag 3060
agggaaaagg cctgggtaat ggggatcctt tgattgggac gtttcgaatg tgtggtgagc 3120
tgttcagagt gtcatcactt accatgactg acctgaattt gttcatgact attgtgttct 3180
gtagcctgag acagctgcct gtgtgggact gagatgcagg atttcttcac acctctcctt 3240
tgtgacttca agagcctctg gcatctcttt ctgcaaaggc atctgaatgt gtctgcgttc 3300
ctgttagcat aatgtgagga ggtggagaga cagcccaccc ccgtgtccac cgtgacccc 3359
//