Dbfetch
ID MG715476; SV 1; linear; genomic DNA; STD; HUM; 3358 BP. XX AC MG715476; XX DT 08-FEB-2018 (Rel. 135, Created) DT 08-FEB-2018 (Rel. 135, Last updated, Version 2) XX DE Homo sapiens isolate NT01925 MHC class I antigen (HLA-C) gene, HLA-C*03:82 DE allele, partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3358 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [2] RP 1-3358 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (20-DEC-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; 4ab86bdc7be1166a610ea04a53247bce. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V2.7.0.9307; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3358 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01925" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <295..>3019 FT /gene="HLA-C" FT /allele="HLA-C*03:82" FT mRNA join(<295..367,498..767,1013..1288,1876..2151,2273..2392, FT 2832..2864,2972..>3019) FT /gene="HLA-C" FT /allele="HLA-C*03:82" FT /product="MHC class I antigen" FT CDS join(295..367,498..767,1013..1288,1876..2151,2273..2392, FT 2832..2864,2972..>3019) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*03:82" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2K9VPV3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2K9VPV3" FT /protein_id="AUV64452.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQSQTDRVSLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACK" XX SQ Sequence 3358 BP; 628 A; 972 C; 1055 G; 703 T; 0 other; aggagaagag gaatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60 tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag gattctccac tcccctgagt 120 ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180 aattcccact cccattgggt gtcggattct agagaagcca atcagcgtct ccgcagtccc 240 ggttctgaag tccccagtca cccacccgga ctcagattct ccccagacgc cgagatgcgg 300 gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccctggccct gaccgagacc 360 tgggccggtg agtgcggggt tgggagggaa tcggcctctg cggagaggag cgaggggccc 420 gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480 cccctcctcg cccccaggct cccactccat gaggtatttc tacaccgctg tgtcccggcc 540 cggccgcggg gagccccact tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600 gttcgacagc gacgccgcga gtccgagagg ggagccgcgg gcgccgtggg tggagcagga 660 ggggccggag tattgggacc gggagacaca gaagtacaag cgccagtcac agactgaccg 720 agtgagcctg cggaacctgc gcggctacta caaccagagc gaggccggtg agtgaccccg 780 gcccggggcg caggtcacga cccctcctca tcccccacgg acggcccggg tcgccccaag 840 tctcccggtc tgagatccac cccgaggctg cggaacccgc ccagaccctc gaccggagag 900 agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960 tcggggcggg gcggggctcg ggggacgggg ctgaccgcgg gggcggggcc agggtctcac 1020 atcatccaga ggatgtatgg ctgcgacgtg gggcccgacg ggcgcctcct ccgcgggtat 1080 gaccagtacg cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg 1140 accgccgcgg acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg 1200 gagcagctga gagcctacct ggagggcctg tgcgtggagt ggctccgcag atacctgaag 1260 aatgggaagg agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct 1320 cctgtagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag 1380 aatatcgccc tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc 1440 ccctctgctc tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag 1500 tccctagaat actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt 1560 caggctgctg acctttctct caggccttgt tctctgcctc acgctcaatg tgtttgaagg 1620 tttgattcca gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg 1680 ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc 1740 caggctggcg tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccgttctcag 1800 gatggtcaca tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct 1860 gactcttccc gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg 1920 aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc 1980 agtgggatgg ggaggaccaa actcaggaca ctgagcttgt ggagaccagg ccagcaggag 2040 atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca 2100 cgtgccatgt gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg 2160 gggatgaggg gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccagg 2220 tcagggctga ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccgtct 2280 tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta 2340 gctgtcctag gagctgtggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa 2400 ggggtgagga gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga 2460 agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac 2520 cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac 2580 cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc 2640 tgctaaggac agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt 2700 ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac 2760 taggaggttc ccctaagatc gcatggccct gactcctccc tgtcccctca cagggcattt 2820 tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg 2880 ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc 2940 tgaccaggtc tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag 3000 tctctcatcg cttgtaaagg tgagattctg gggagctgaa gtggtcgggg gtggggcaga 3060 gggaaaaggc ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct 3120 gttcagagtg tgatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg 3180 tagcctgaga cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt 3240 gtgacttcaa gagcctctgg catctctttc tgcaaaggca tctgaatgtg tctgcgttcc 3300 tgttagcata atgtgaggag gtggagagac agcccacccc cgtgtccacc gtgacccc 3358 //