Dbfetch
ID MG680173; SV 1; linear; genomic DNA; STD; HUM; 2981 BP. XX AC MG680173; XX DT 01-FEB-2018 (Rel. 135, Created) DT 01-FEB-2018 (Rel. 135, Last updated, Version 1) XX DE Homo sapiens isolate NT01892 MHC class I antigen (HLA-B) gene, DE HLA-B*07:22:01 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2981 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [2] RP 1-2981 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (15-DEC-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, United States of America XX DR MD5; 080f90f355e1325582ffdd809ad59f5f. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V2.7.0.9307; Sequencher v. V5.4.6 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2981 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01892" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <276..>2951 FT /gene="HLA-B" FT /allele="HLA-B*07:22:01" FT mRNA join(<276..348,477..746,992..1267,1842..2117,2211..2327, FT 2769..2801,2908..>2951) FT /gene="HLA-B" FT /allele="HLA-B*07:22:01" FT /product="MHC class I antigen" FT CDS join(276..348,477..746,992..1267,1842..2117,2211..2327, FT 2769..2801,2908..2951) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*07:22:01" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2I6Q7C5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2I6Q7C5" FT /protein_id="AUT12134.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAANTA FT AQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" XX SQ Sequence 2981 BP; 553 A; 892 C; 937 G; 599 T; 0 other; gaagtcccag gtcccggacg gggctctcag ggtctcaggc tccgagggcc gcgtctgcaa 60 tggggaggcg cagcgttggg gattccccac tcccctgagt ttcacttctt ctcccaactt 120 gtgtcgggtc cttcttccag gatactcgtg acgcgtcccc acttcccact cccattgggt 180 attggatatc tagagaagcc aatcagcgtc gccgcggtcc cagttctaaa gtccccacgc 240 acccacccgg actcagagtc tcctcagacg ccgagatgct ggtcatggcg ccccgaaccg 300 tcctcctgct gctctcggcg gccctggccc tgaccgagac ctgggccggt gagtgcgggt 360 cgggagggaa atggcctctg ccgggaggag cgaggggacc gcaggcgggg gcgcaggacc 420 tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcac ccccaggctc 480 ccactccatg aggtatttct acacctccgt gtcccggccc ggccgcgggg agccccgctt 540 catctcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg acgccgcgag 600 tccgagagag gagccgcggg cgccgtggat agagcaggag gggccggagt attgggaccg 660 gaacacacag atctacaagg cccaggcaca gactgaccga gagagcctgc ggaacctgcg 720 cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc aggtcacgac 780 tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag atccgcctcc 840 ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg cgtttacccg 900 gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg cggggctcgg 960 gggactgggc tgaccgcggg gccggggcca gggtctcaca ccctccagag catgtacggc 1020 tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtacgc ctacgacggc 1080 aaggattaca tcgccctgaa cgaggacctg cgctcctgga ccgccgcgaa cacggcggct 1140 cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagcggag agcctacctg 1200 gagggcgagt gcgtggagtg gctccgcaga tacctggaga acgggaagga caagctggag 1260 cgcgctggta ccaggggcag tggggagcct tccccatctc ctataggtcg ccggggatgg 1320 cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct ccgttgaatg 1380 gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct ctagacaatt 1440 aaggaatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac tgatcagggg 1500 tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag gccttgttct 1560 ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc actttacctc 1620 cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact ttccaatgaa 1680 taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg ccccttcccc 1740 accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg gtgtcccatg 1800 aaagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa agacacacgt 1860 gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc tgggtttcta 1920 ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc aggacactga 1980 gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag ctgtggtggt 2040 gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc tgccgaagcc 2100 cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct cagggaaagc 2160 aggagccctt cagcagggtc agggcccctc atcttcccct cctttcccag agccgtcttc 2220 ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag cagttgtggt 2280 catcggagct gtggtcgctg ctgtgatgtg taggaggaag agttcaggta gggaaggggt 2340 gaggggtggg gtctgggttt tcttgtccca ctgggggttt caagccccag gtagaagtgt 2400 tccctgcctc attactggga agcagcatgc acacaggggc taacgcagcc tgggaccctg 2460 tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggatgga tgtatcacct 2520 tgatggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga aggtccctgc 2580 taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc ctcgtgtttc 2640 ctgatcctgc cctgggtctg tagtcatact tctggaaatt ccttttgggt ccaagactag 2700 gaggttcctc taagatctca tggccctgct tcctcccagt gccctcacag gacattttct 2760 tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtggt gggggtggga 2820 gtgtggagga gctcacccac cccataattc ctcctgtccc acgtctcctg cgggctctga 2880 ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct gatgtgtctc 2940 tcacagcttg aaaaggtgag attcttgggg tctagagtgg g 2981 //