Dbfetch
ID MG672521; SV 1; linear; genomic DNA; STD; HUM; 2958 BP.
XX
AC MG672521;
XX
DT 09-NOV-2018 (Rel. 138, Created)
DT 09-NOV-2018 (Rel. 138, Last updated, Version 1)
XX
DE Homo sapiens MHC class I antigen (HLA-C) gene, HLA-C*03var allele, exons 1
DE through 6 and partial cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2958
RA Arora D., Rambani V., Venkataramaiah M., Das S., Vl R., Sm S.M.;
RT ;
RL Submitted (12-DEC-2017) to the INSDC.
RL NGS, Medgenome Labs Pvt. Ltd, 3rd Floor, Narayana Netharalaya Building,
RL #258/A Bommasandra, Hosur Road, Bangalore, Karnataka 560099, India
XX
DR MD5; 2d8478e6ef057816a8cf685d17ce32c7.
XX
FH Key Location/Qualifiers
FH
FT source 1..2958
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>2958
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT mRNA join(<1..367,498..767,1013..1288,1876..2151,2273..2392,
FT 2832..>2864)
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /product="MHC class I antigen"
FT exon <1..367
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=1
FT 5'UTR <1..294
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT CDS join(295..367,498..767,1013..1288,1876..2151,2273..2392,
FT 2832..>2864)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A3G2BA53"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A3G2BA53"
FT /protein_id="AYM26553.1"
FT /translation="MRVMAPRTLILLLSGAPALTETWAGSHSMRYFYTAVSRPGRGEPH
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT LRGYYNQSEAGSHILQRMYGCDVGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAA"
FT exon 498..767
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=2
FT exon 1013..1288
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=3
FT exon 1876..2151
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=4
FT exon 2273..2392
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=5
FT exon 2832..2864
FT /gene="HLA-C"
FT /allele="HLA-C*03var"
FT /number=6
XX
SQ Sequence 2958 BP; 545 A; 884 C; 938 G; 591 T; 0 other;
aggagaagag gaatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcac tggggaggcg ccgcgttgag gattctccac tcccctgagt 120
ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180
aattcccact cccattgggt gtcggattct agagaagcca atcagcgtct ccgcagtccc 240
ggttctgaag tccccagtca cccacccgga ctcagattct ccccagacgc cgagatgcgg 300
gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccccggccct gaccgagacc 360
tgggccggtg agtgcggggt tgggagggaa tcggcctctg cggagaggag cgaggggccc 420
gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480
cccctcctcg cccccaggct cccactccat gaggtatttc tacaccgctg tgtcccggcc 540
cggccgcggg gagccccact tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600
gttcgacagc gacgccgcga gtccgagagg ggagccgcgg gcgccgtggg tggagcagga 660
ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac agactgaccg 720
agtgagcctg cggaacctgc gcggctacta caaccagagc gaggccggtg agtgaccccg 780
gcccggggcg caggtcacga cccctcctca tcccccacgg acggcccggg tcgccccaag 840
tctcccggtc tgagatccac cccgaggctg cggaacccgc ccagaccctc gaccggagag 900
agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960
tcggggcggg gcggggctcg ggggacgggg ctgaccgcgg gggcggggcc agggtctcac 1020
atcctccaga ggatgtatgg ctgcgacgtg gggcccgacg ggcgcctcct ccgcgggtat 1080
gaccagtccg cctacgacgg caaggattac atcgccctga acgaggatct gcgctcctgg 1140
accgccgcgg acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg 1200
gagcagctga gagcctacct ggagggcctg tgcgtggagt ggctccgcag atacctgaag 1260
aatgggaagg agacgctgca gcgcgcgggt accaggggca gtggggagcc ttccccatct 1320
cctgtagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcgctag 1380
aatatcgccc tcccttgaat ggagaatggg atgagttttc ctgagtttcc tctgagggcc 1440
ccctctgctc tctaggacaa ttaagggatg aagtccttga ggaaatggag gggaagacag 1500
tccctagaat actgatcagg ggtccccttt gaccactttg accactgcag cagctgtggt 1560
caggctgctg acctttctct caggccttgt tctctgcctc acgctcaatg tgtttgaagg 1620
tttgattcca gcttttctga gtccttcggc ctccactcag gtcaggacca gaagtcgctg 1680
ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc 1740
caggctggcg tctgggttct gtgccccctt ccccacccca ggtgtcctgt ccgttctcag 1800
gatggtcaca tgggcgctgt tggagtgtcg caagagagat acaaagtgtc tgaattttct 1860
gactcttccc gtcagaacac ccaaagacac acgtgaccca ccatcccgtc tctgaccatg 1920
aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc 1980
agtgggatgg ggaggaccaa actcaggaca ctgagcttgt ggagaccagg ccagcaggag 2040
atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggagaagag cagagataca 2100
cgtgccatgt gcagcacgag gggctgccgg agcccctcac cctgagatgg ggtaaggagg 2160
gggatgaggg gtgatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccagg 2220
tcagggctga ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccgtct 2280
tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta 2340
gctgtcctag gagctgtggt ggctgttgtg atgtgtagga ggaagagctc aggtagggaa 2400
ggggtgagga gtggggtctg ggttttcttg ttccactggg agtttcaagc cccaggtaga 2460
agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac 2520
cctgtgtgcc agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac 2580
cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc 2640
tgctaaggac agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt 2700
ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac 2760
taggaggttc ccctaagatc gcatggccct gactcctccc tgtcccctca cagggcattt 2820
tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg 2880
ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc 2940
tgaccaggtc tttttttt 2958
//