Dbfetch
ID MG553959; SV 1; linear; genomic DNA; STD; HUM; 2994 BP.
XX
AC MG553959;
XX
DT 26-JAN-2018 (Rel. 135, Created)
DT 18-DEC-2018 (Rel. 139, Last updated, Version 4)
XX
DE Homo sapiens isolate NT01777 MHC class I antigen (HLA-B) gene, HLA-B*51:40
DE allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357
RP 1-2994
RX DOI; .1111/iji.12357.
RX PUBMED; 29405566.
RA Marsh S.G.;
RT "Nomenclature for factors of the HLA system, update December 2017";
RL Int. J. Immunogenet. 45(2):88-93(2018).
XX
RN [3]
RP 1-2994
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT ;
RL Submitted (20-NOV-2017) to the INSDC.
RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program,
RL 11333 Woodglen Dr, Rockville, MD 20852, USA
XX
DR MD5; a7ed829821010e5c988ba0cf541b7c6b.
XX
FH Key Location/Qualifiers
FH
FT source 1..2994
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT01777"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <276..>2964
FT /gene="HLA-B"
FT /allele="HLA-B*51:40"
FT mRNA join(<276..348,478..747,993..1268,1844..2119,2224..2340,
FT 2782..2814,2921..>2964)
FT /gene="HLA-B"
FT /allele="HLA-B*51:40"
FT /product="MHC class I antigen"
FT CDS join(276..348,478..747,993..1268,1844..2119,2224..2340,
FT 2782..2814,2921..2964)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*51:40"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A2I7FSV3"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A2I7FSV3"
FT /protein_id="AUQ35616.1"
FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRI
FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT GGSYSQAASSDSAQGSDVSLTA"
XX
SQ Sequence 2994 BP; 557 A; 892 C; 939 G; 606 T; 0 other;
gaagtcccag gccccgggcg gggctctcag ggtctcaggc tccgagagcc ttgtctgcat 60
tggggaggcg cagcgttggg gattccccac tcccacgagt ttcacttctt ctcccaacct 120
atgtcgggtc cttcttccag gatactcgtg acgcgtcccc atttcccact cccattgggt 180
gtcggatatc tagagaagcc aatcagtgtc gccggggtcc cagttctaaa gtccccacgc 240
acccacccgg actcagaatc tcctcagacg ccgagatgcg ggtcacggcg ccccgaaccg 300
tcctcctgct gctctggggg gcagtggccc tgaccgagac ctgggccggt gagtgcgggg 360
tcgggaggga aatggcctct gtggggagga gcgaggggac cgcaggcggg ggcgcaggac 420
ctgaggagcc gcgccgggag gagggtcggg cgggtctcag cccctcctcg cccccaggct 480
cccactccat gaggtatttc tacaccgcca tgtcccggcc cggccgcggg gagccccgct 540
tcattgcagt gggctacgtg gacgacaccc agttcgtgag gttcgacagc gacgccgcga 600
gtccgaggac ggagccccgg gcgccatgga tagagcagga ggggccggag tattgggacc 660
ggaacacaca gatcttcaag accaacacac agacttaccg agagaacctg cggatcgcgc 720
tccgctacta caaccagagc gaggccggtg agtgaccccg gcccggggcg caggtcacga 780
ctccccatcc cccacgtacg gcccgggtcg ccccgagtct ccgggtccga gatccgcctc 840
cctgaggccg cgggacccgc ccagaccctc gaccggcgag agccccaggc gcgtttaccc 900
ggtttcattt tcagttgagg ccaaaatccc cgcgggttgg tcggggcggg gcggggctcg 960
ggggacggtg ctgaccgcgg ggccggggcc agggtctcac acttggcaga cgatgtatgg 1020
ctgcgacgtg gggccggacg ggcgcctcct ccgcgggcat aaccagtacg cctacgacgg 1080
caaagattac atcgccctga acgaggacct gagctcctgg accgcggcgg acacggcggc 1140
tcagatcacc cagcgcaagt gggaggcggc ccgtgtggcg gagcagctga gagcctacct 1200
ggagggcctg tgcgtggagt ggctccgcag atacctggag aacgggaagg agacgctgca 1260
gcgcgcgggt accaggggca gtggggagcc ttccccatct cctataggtc gccggggatg 1320
gcctcccacg agaagaggag gaaaatggga tcagcgctag aatgtcgccc tcccttgaat 1380
ggagaatggc atgagttttc ctgagtttcc tctgagggcc ccctcttctc tctaggacaa 1440
ttaagggatg acgtctctga ggaaatggag gggaagacag tccctagaat actgatcagg 1500
ggtccccttt gacccctgca gcagccttgg gaaccgtgac ttttcctctc aggccttgtt 1560
ctctgcctca cactcagtgt gtttggggct ctgattccag cacttctgag tcactttacc 1620
tccactcaga tcaggagcag aagtccctgt tccccgctca gagactcgaa ctttccaatg 1680
aataggagat tatcccaggt gcctgcgtcc aggctggtgt ctgggttctg tgccccttcc 1740
ccacaccagg tgtcctgtcc attctcaggc tggtcacatg ggtggtccta gggtgtccca 1800
tgagagatgc aaagcgcctg aattttctga ctcttcccat cagacccccc aaagacacac 1860
gtgacccacc accccgtctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc 1920
taccctgcgg agatcacact gacctggcag cgggatggcg aggaccaaac tcaggacact 1980
gagcttgtgg agaccagacc agcaggagat agaaccttcc agaagtgggc agctgtggtg 2040
gtgccttctg gagaagagca gagatacaca tgccatgtac agcatgaggg gctgccgaag 2100
cccctcaccc tgagatgggg taaggagggg gatgaggggt catatctctt ctcagggaaa 2160
gcaggagccc ttctggagcc cttcagcagg gtcagggccc ctcgtcttcc cctcctttcc 2220
cagagccatc ttcccagtcc accatcccca tcgtgggcat tgttgctggc ctggctgtcc 2280
tagcagttgt ggtcatcgga gctgtggtcg ctactgtgat gtgtaggagg aagagctcag 2340
gtagggaagg ggtgaggggt ggggtctggg ttttcttgtc ccactggggg tttcaagccc 2400
caggtagaag tgttccctgc ctcattactg ggaagcagca tccacacagg ggctaacgca 2460
gcctgggacc ctgtgtgcca gcacttactc ttttgtgcag cacatgtgac aatgaaggac 2520
ggatgtatca ccttgatggt tgtggtgttg gggtcctgat ttcagcattc atgagtcagg 2580
ggaaggtccc tgctaaggac agaccttagg agggcagttg gtccaggacc cacacttgct 2640
ttcctcgtgt ttcctgatcc tgccttgggt ctgtagtcat acttctggaa attccttttg 2700
ggtccaagac gaggaggttc ctctaagatc tcatggccct gcttcctccc agtcccctca 2760
caggacattt tcttcccaca ggtggaaaag gagggagcta ctctcaggct gcgtgtaagt 2820
ggtgggggtg ggagtgtgga ggagctcacc caccccataa ttcctcctgt cccacgtctc 2880
ctgcgggctc tgaccaggtc ctgtttttgt tctactccag ccagcgacag tgcccagggc 2940
tctgatgtgt ctctcacagc ttgaaaaggt gagattcttg gggtctagag tggg 2994
//