Dbfetch
ID MG553959; SV 1; linear; genomic DNA; STD; HUM; 2994 BP. XX AC MG553959; XX DT 26-JAN-2018 (Rel. 135, Created) DT 18-DEC-2018 (Rel. 139, Last updated, Version 4) XX DE Homo sapiens isolate NT01777 MHC class I antigen (HLA-B) gene, HLA-B*51:40 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357 RP 1-2994 RX DOI; .1111/iji.12357. RX PUBMED; 29405566. RA Marsh S.G.; RT "Nomenclature for factors of the HLA system, update December 2017"; RL Int. J. Immunogenet. 45(2):88-93(2018). XX RN [3] RP 1-2994 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (20-NOV-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; a7ed829821010e5c988ba0cf541b7c6b. XX FH Key Location/Qualifiers FH FT source 1..2994 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01777" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <276..>2964 FT /gene="HLA-B" FT /allele="HLA-B*51:40" FT mRNA join(<276..348,478..747,993..1268,1844..2119,2224..2340, FT 2782..2814,2921..>2964) FT /gene="HLA-B" FT /allele="HLA-B*51:40" FT /product="MHC class I antigen" FT CDS join(276..348,478..747,993..1268,1844..2119,2224..2340, FT 2782..2814,2921..2964) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*51:40" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2I7FSV3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2I7FSV3" FT /protein_id="AUQ35616.1" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRI FT ALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 2994 BP; 557 A; 892 C; 939 G; 606 T; 0 other; gaagtcccag gccccgggcg gggctctcag ggtctcaggc tccgagagcc ttgtctgcat 60 tggggaggcg cagcgttggg gattccccac tcccacgagt ttcacttctt ctcccaacct 120 atgtcgggtc cttcttccag gatactcgtg acgcgtcccc atttcccact cccattgggt 180 gtcggatatc tagagaagcc aatcagtgtc gccggggtcc cagttctaaa gtccccacgc 240 acccacccgg actcagaatc tcctcagacg ccgagatgcg ggtcacggcg ccccgaaccg 300 tcctcctgct gctctggggg gcagtggccc tgaccgagac ctgggccggt gagtgcgggg 360 tcgggaggga aatggcctct gtggggagga gcgaggggac cgcaggcggg ggcgcaggac 420 ctgaggagcc gcgccgggag gagggtcggg cgggtctcag cccctcctcg cccccaggct 480 cccactccat gaggtatttc tacaccgcca tgtcccggcc cggccgcggg gagccccgct 540 tcattgcagt gggctacgtg gacgacaccc agttcgtgag gttcgacagc gacgccgcga 600 gtccgaggac ggagccccgg gcgccatgga tagagcagga ggggccggag tattgggacc 660 ggaacacaca gatcttcaag accaacacac agacttaccg agagaacctg cggatcgcgc 720 tccgctacta caaccagagc gaggccggtg agtgaccccg gcccggggcg caggtcacga 780 ctccccatcc cccacgtacg gcccgggtcg ccccgagtct ccgggtccga gatccgcctc 840 cctgaggccg cgggacccgc ccagaccctc gaccggcgag agccccaggc gcgtttaccc 900 ggtttcattt tcagttgagg ccaaaatccc cgcgggttgg tcggggcggg gcggggctcg 960 ggggacggtg ctgaccgcgg ggccggggcc agggtctcac acttggcaga cgatgtatgg 1020 ctgcgacgtg gggccggacg ggcgcctcct ccgcgggcat aaccagtacg cctacgacgg 1080 caaagattac atcgccctga acgaggacct gagctcctgg accgcggcgg acacggcggc 1140 tcagatcacc cagcgcaagt gggaggcggc ccgtgtggcg gagcagctga gagcctacct 1200 ggagggcctg tgcgtggagt ggctccgcag atacctggag aacgggaagg agacgctgca 1260 gcgcgcgggt accaggggca gtggggagcc ttccccatct cctataggtc gccggggatg 1320 gcctcccacg agaagaggag gaaaatggga tcagcgctag aatgtcgccc tcccttgaat 1380 ggagaatggc atgagttttc ctgagtttcc tctgagggcc ccctcttctc tctaggacaa 1440 ttaagggatg acgtctctga ggaaatggag gggaagacag tccctagaat actgatcagg 1500 ggtccccttt gacccctgca gcagccttgg gaaccgtgac ttttcctctc aggccttgtt 1560 ctctgcctca cactcagtgt gtttggggct ctgattccag cacttctgag tcactttacc 1620 tccactcaga tcaggagcag aagtccctgt tccccgctca gagactcgaa ctttccaatg 1680 aataggagat tatcccaggt gcctgcgtcc aggctggtgt ctgggttctg tgccccttcc 1740 ccacaccagg tgtcctgtcc attctcaggc tggtcacatg ggtggtccta gggtgtccca 1800 tgagagatgc aaagcgcctg aattttctga ctcttcccat cagacccccc aaagacacac 1860 gtgacccacc accccgtctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc 1920 taccctgcgg agatcacact gacctggcag cgggatggcg aggaccaaac tcaggacact 1980 gagcttgtgg agaccagacc agcaggagat agaaccttcc agaagtgggc agctgtggtg 2040 gtgccttctg gagaagagca gagatacaca tgccatgtac agcatgaggg gctgccgaag 2100 cccctcaccc tgagatgggg taaggagggg gatgaggggt catatctctt ctcagggaaa 2160 gcaggagccc ttctggagcc cttcagcagg gtcagggccc ctcgtcttcc cctcctttcc 2220 cagagccatc ttcccagtcc accatcccca tcgtgggcat tgttgctggc ctggctgtcc 2280 tagcagttgt ggtcatcgga gctgtggtcg ctactgtgat gtgtaggagg aagagctcag 2340 gtagggaagg ggtgaggggt ggggtctggg ttttcttgtc ccactggggg tttcaagccc 2400 caggtagaag tgttccctgc ctcattactg ggaagcagca tccacacagg ggctaacgca 2460 gcctgggacc ctgtgtgcca gcacttactc ttttgtgcag cacatgtgac aatgaaggac 2520 ggatgtatca ccttgatggt tgtggtgttg gggtcctgat ttcagcattc atgagtcagg 2580 ggaaggtccc tgctaaggac agaccttagg agggcagttg gtccaggacc cacacttgct 2640 ttcctcgtgt ttcctgatcc tgccttgggt ctgtagtcat acttctggaa attccttttg 2700 ggtccaagac gaggaggttc ctctaagatc tcatggccct gcttcctccc agtcccctca 2760 caggacattt tcttcccaca ggtggaaaag gagggagcta ctctcaggct gcgtgtaagt 2820 ggtgggggtg ggagtgtgga ggagctcacc caccccataa ttcctcctgt cccacgtctc 2880 ctgcgggctc tgaccaggtc ctgtttttgt tctactccag ccagcgacag tgcccagggc 2940 tctgatgtgt ctctcacagc ttgaaaaggt gagattcttg gggtctagag tggg 2994 //