Dbfetch
ID MG525292; SV 1; linear; genomic DNA; STD; HUM; 2991 BP. XX AC MG525292; XX DT 15-JAN-2018 (Rel. 135, Created) DT 08-MAR-2018 (Rel. 136, Last updated, Version 2) XX DE Homo sapiens isolate NT01708 MHC class I antigen (HLA-B) gene, HLA-B*27:01 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357 RP 1-2991 RX DOI; .1111/iji.12357. RX PUBMED; 29405566. RA Marsh S.G.; RT "Nomenclature for factors of the HLA system, update December 2017"; RL Int. J. Immunogenet. 45(2):88-93(2018). XX RN [2] RP 1-2991 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [3] RP 1-2991 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (13-NOV-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; 819157db4b84a1f38249b9a45bb78b2b. XX FH Key Location/Qualifiers FH FT source 1..2991 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01708" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <285..>2961 FT /gene="HLA-B" FT /allele="HLA-B*27:01" FT mRNA join(<285..357,487..756,1001..1276,1852..2127,2221..2337, FT 2779..2811,2918..>2961) FT /gene="HLA-B" FT /allele="HLA-B*27:01" FT /product="MHC class I antigen" FT CDS join(285..357,487..756,1001..1276,1852..2127,2221..2337, FT 2779..2811,2918..2961) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*27:01" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2I6Q7B5" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2I6Q7B5" FT /protein_id="AUM84865.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTYRENLRT FT ALRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" XX SQ Sequence 2991 BP; 549 A; 895 C; 950 G; 597 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccgcgag tccgagagag gagccgcggg cgccgtggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctgcaagg ccaaggcaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg ggacggggct gaccgcgggg gcggggccag ggtctcacac cctccagaat 1020 atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggtacca ccaggacgcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgccgcggac 1140 acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100 tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160 cagggaaagc aggagccctt cagcagggtc agggcccctc atcttccctt cctttcccag 2220 agccgtcttc ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag 2280 cagttgtggt catcggagct gtggtcgctg ctgtgatgtg taggaggaag agctcaggta 2340 gggaaggggt gaggggtggg gtctgagttt tcttgtccca ctgggggttt caagccccag 2400 gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc taacgcagcc 2460 tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggacgga 2520 tgtatcacct tggtggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga 2580 aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc 2640 ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt ccttttgggt 2700 ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt cccctcacag 2760 ggcattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtgat 2820 gggggtggga gtgtggagga gctcacccac cccctaattc ctcctgtccc acgtctcctg 2880 cgggctctga ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct 2940 gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg g 2991 //