Dbfetch
ID MG525271; SV 1; linear; genomic DNA; STD; HUM; 2990 BP.
XX
AC MG525271;
XX
DT 15-JAN-2018 (Rel. 135, Created)
DT 08-MAR-2018 (Rel. 136, Last updated, Version 2)
XX
DE Homo sapiens isolate NT01682 MHC class I antigen (HLA-B) gene, HLA-B*07:42
DE allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357
RP 1-2990
RX DOI; .1111/iji.12357.
RX PUBMED; 29405566.
RA Marsh S.G.;
RT "Nomenclature for factors of the HLA system, update December 2017";
RL Int. J. Immunogenet. 45(2):88-93(2018).
XX
RN [2]
RP 1-2990
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT "Novel HLA Class I alleles";
RL Unpublished.
XX
RN [3]
RP 1-2990
RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.;
RT ;
RL Submitted (13-NOV-2017) to the INSDC.
RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program,
RL 11333 Woodglen Dr, Rockville, MD 20852, USA
XX
DR MD5; 50180acbd6e92f1170450b3abe5365a7.
XX
FH Key Location/Qualifiers
FH
FT source 1..2990
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT01682"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <285..>2960
FT /gene="HLA-B"
FT /allele="HLA-B*07:42"
FT mRNA join(<285..357,486..755,1001..1276,1851..2126,2220..2336,
FT 2778..2810,2917..>2960)
FT /gene="HLA-B"
FT /allele="HLA-B*07:42"
FT /product="MHC class I antigen"
FT CDS join(285..357,486..755,1001..1276,1851..2126,2220..2336,
FT 2778..2810,2917..2960)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*07:42"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A2I6PN79"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A2I6PN79"
FT /protein_id="AUM84844.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRN
FT LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLESADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAACSDSAQGSDVSLTA"
XX
SQ Sequence 2990 BP; 556 A; 893 C; 941 G; 600 T; 0 other;
gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60
cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc 120
tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca cttcccactc 180
ccattgggta ttggatatct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240
tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc 300
cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg 360
agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg 420
cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcacc 480
cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga 540
gccccgcttc atctcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600
cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660
ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720
gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780
ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840
tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900
gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960
ggggctcggg ggactgggct gaccgcgggg ccggggccag ggtctcacac cctccagagc 1020
atgtacggct gcgacgtggg gccggacggg cgcctcctcc gcgggcatga ccagtacgcc 1080
tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac 1140
acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga 1200
gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggac 1260
aagctggaga gcgctggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320
cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380
cgttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440
tagacaatta aggaatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500
gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560
ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620
ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680
tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740
cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800
tgtcccatga aagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860
gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920
gggtttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980
ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040
tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100
gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160
agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga 2220
gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280
agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag 2340
ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400
tagaagtgtt ccctgcctca ttactgggaa gcagcatgca cacaggggct aacgcagcct 2460
gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggatggat 2520
gtatcacctt gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580
ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640
tcgtgtttcc tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc 2700
caagactagg aggttcctct aagatctcat ggccctgctt cctcccagtg ccctcacagg 2760
acattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg 2820
ggggtgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880
gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940
atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg 2990
//