Dbfetch
ID MG397164; SV 1; linear; genomic DNA; STD; HUM; 2980 BP. XX AC MG397164; XX DT 15-JAN-2018 (Rel. 135, Created) DT 08-MAR-2018 (Rel. 136, Last updated, Version 5) XX DE Homo sapiens isolate NT01670 MHC class I antigen (HLA-B) gene, DE HLA-B*14:02:02 allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Publication Status: Available-Online prior to print DOI: 10.1111/iji.12357 RP 1-2980 RX DOI; .1111/iji.12357. RX PUBMED; 29405566. RA Marsh S.G.; RT "Nomenclature for factors of the HLA system, update December 2017"; RL Int. J. Immunogenet. 45(2):88-93(2018). XX RN [2] RP 1-2980 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [3] RP 1-2980 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (02-NOV-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; ef6e858d905e7f73ff20025b49a7c17c. XX FH Key Location/Qualifiers FH FT source 1..2980 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01670" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <276..>2950 FT /gene="HLA-B" FT /allele="HLA-B*14:02:02" FT mRNA join(<276..348,477..746,993..1268,1841..2116,2210..2326, FT 2768..2800,2907..>2950) FT /gene="HLA-B" FT /allele="HLA-B*14:02:02" FT /product="MHC class I antigen" FT CDS join(276..348,477..746,993..1268,1841..2116,2210..2326, FT 2768..2800,2907..2950) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*14:02:02" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A0S2ILF3" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A0S2ILF3" FT /protein_id="AUM62120.1" FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTAVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTDRESLRN FT LRGYYNQSEAGSHTLQWMYGCDVGPDGRLLRGYNQFAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGTCVEWLRRHLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAASSDSAQGSDVSLTA" XX SQ Sequence 2980 BP; 555 A; 890 C; 935 G; 600 T; 0 other; gaagtcccag gtcccggacg gggctctcag ggtctcaggc tccgagggcc gcgtctgcaa 60 tggggaggcg cagcgttggg gattccccac tcccctgagt ttcacttctt ctcccaactt 120 gtgtcgggtc cttcttccag gatactcgtg acgcatcccc acttcccact cccattgggt 180 gtcggatatc tagagaagcc aatcagcgtc gccggggtcc cagttctaaa gtccccacgc 240 acccacccgg actcagagtc tcctcagacg ccaagatgct ggtcatggcg ccccgaaccg 300 tcctcctgct gctctcggcg gccctggccc tgaccgagac ctgggccggt gagtgcgggt 360 cgggagggaa atggcctctg ccgggaggag cgaggggacc gcaggcgggg gcgcaggacc 420 tgaggagccg cgccgggagg agggtcgggc gggtttcagc ccctcctcgc ccccaggctc 480 ccactccatg aggtatttct acaccgccgt gtcccggccc ggccgcgggg agccccgctt 540 catctcagtg ggctacgtgg acgacacgca gttcgtgagg ttcgacagcg acgccgcgag 600 tccgagagag gagccgcggg cgccgtggat agagcaggag gggccggaat attgggaccg 660 gaacacacag atctgcaaga ccaacacaca gactgaccga gagagcctgc ggaacctgcg 720 cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc aggtcacgac 780 tccccatccc ccacggacgg cccgggtcgc cccgagtctc cgggtccgag atccgcctcc 840 ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg cgtttacccg 900 gtttcatttt cagttgaggc caaaatcccc gcgggttggg cggggcgggg cggggctcgg 960 ggggactggg ctgaccgcgg gggcggggcc agggtctcac accctccagt ggatgtatgg 1020 ctgcgacgtg gggccggacg ggcgcctcct ccgcgggtat aaccagttcg cctacgacgg 1080 caaggattac atcgccctga acgaggacct gagctcctgg accgcggccg acaccgcggc 1140 tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg gagcagctga gagcctacct 1200 ggagggcacg tgcgtggagt ggctccgcag acacctggag aacgggaagg agacgctgca 1260 gcgcgcgggt accaggggca gtggggagcc ttccccatct cctataggtc gccggggatg 1320 gcctcccacg agaagaagag gaaaatggga tcagcgctag aatgtcgccc tcccttgaat 1380 ggagaatggc atgagttttc ctgagtttcc tctgagggcc ccctcttctc tctaggacaa 1440 ttaagggatg acgtctctga ggaaatggag gggaagacag tccctagaat actgatcagg 1500 ggtccccttt gacccctgca gcagccttgg gaaccatgac ttttcttctc aggccttgtt 1560 ctctgcctca cactcagtgt gtttggggct ctgattccag cacttctgag tcactttacc 1620 tccactcaga tcaggagcag aagtctctgt tccccgctca gagactcgaa ctttccaatg 1680 aatagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgt cccttcccca 1740 ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg tgtcccatga 1800 gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa gacacatgtg 1860 acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct gggcttctac 1920 cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca ggacaccgag 1980 cttgtggaga ccagaccagc aggagacaga accttccaga agtgggcagc tgtggtggtg 2040 ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct gccgaagccc 2100 ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc agggaaagca 2160 ggagcccttc agcagggtca gggcccctca tcttcccctc ctttcccaga gccatcttcc 2220 cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc agttgtggtc 2280 atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gttcaggtag ggaaggggtg 2340 aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg tagaagtgtt 2400 ccctgcatca ttactgggaa gcagcatgca cacaggggct aacgcagcct gggaccctgt 2460 gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat gtatcacctt 2520 gatggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa ggtccctgct 2580 aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc tcgtgtttcc 2640 tgatcctgcc ctgggtctgt agtcatactt ctggaaattc cttttgggtc caagactagg 2700 aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg acattttctt 2760 cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtggtg ggggtgggag 2820 tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgt gggctctgac 2880 caggtcctgt ttttgttcta ctccagccag cgacagtgcc cagggctctg atgtgtctct 2940 cacagcttga aaaggtgaga ttcttggggt ctagagtggg 2980 //