Dbfetch
ID MG193561; SV 1; linear; genomic DNA; STD; HUM; 3165 BP. XX AC MG193561; XX DT 16-SEP-2018 (Rel. 138, Created) DT 24-MAY-2019 (Rel. 140, Last updated, Version 2) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*44:46 allele, complete DE cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3165 RA Alizadeh M., Bennasar F., Picard C., Walencik A.; RT ; RL Submitted (09-OCT-2017) to the INSDC. RL LNPRM, EFS, Rue pierre Jean Gineste, Rennes, Bretagne 35016, France XX DR MD5; 68aec38ccc55c7835b96565830821f7e. XX CC ##Assembly-Data-START## CC Assembly Method :: Profiler HLA v. 0.0.0.1 Rev2.0.207 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3165 FT /organism="Homo sapiens" FT /isolate="R35" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3165 FT /gene="HLA-B" FT /allele="HLA-B*44:46" FT mRNA join(1..306,436..705,949..1224,1800..2075,2169..2285, FT 2727..2759,2866..3165) FT /gene="HLA-B" FT /allele="HLA-B*44:46" FT /product="MHC class I antigen" FT 5'UTR 1..233 FT /gene="HLA-B" FT /allele="HLA-B*44:46" FT CDS join(234..306,436..705,949..1224,1800..2075,2169..2285, FT 2727..2759,2866..2909) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*44:46" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A385FB93" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A385FB93" FT /protein_id="AXU98657.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTDRESLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT 3'UTR 2910..3165 FT /gene="HLA-B" FT /allele="HLA-B*44:46" XX SQ Sequence 3165 BP; 585 A; 913 C; 1010 G; 657 T; 0 other; cgagggccgc gtctgcaatg gggaggcgca gcgttgggga ttccccactc ccacgagttt 60 cacttcttct cccaacctat gtcgggtcct tcttccagga tactcgtgac gcgtccccat 120 ttcccactcc cattgggtgt cgggtgtcta gagaagccaa tcagtgtcgc cggggtccca 180 gttctaaagt ccccacgcac ccacccggac tcagaatctc ctcagacgcc gagatgcggg 240 tcacggcgcc ccgaaccctc ctcctgctgc tctggggggc agtggccctg accgagacct 300 gggccggtga gtgcggggtc gggagggaaa tggcctctgt ggggaggaga gaggggaccg 360 caggcggggg cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc 420 cctcctcgcc cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg 480 gccgcgggga gccccgcttc atcaccgtgg gctacgtgga cgacacgctg ttcgtgaggt 540 tcgacagcga cgccacgagt ccgaggaagg agccgcgggc gccatggata gagcaggagg 600 ggccggagta ttgggaccgg gagacacaga tctccaagac caacacacag actgaccgag 660 agagcctgcg gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc 720 ccggggcgca ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc 780 gggtccgaga tccgcccccg aggccgcggg acccgcccag accctcgacc ggcgagagcc 840 ccaggcgcgt ttacccggtt tcattttcag ttgaggccaa aatccccgcg ggttggtcgg 900 ggcggggcgg ggctcggggg acggggctga ccgcggggcc ggggccaggg tctcacatca 960 tccagaggat gtacggctgc gacgtggggc cggacgggcg cctcctccgc gggtatgacc 1020 aggacgccta cgacggcaag gattacatcg ccctgaacga ggacctgagc tcctggaccg 1080 cggcggacac cgcggctcag atcacccagc gcaagtggga ggcggcccgt gtggcggagc 1140 agctgagagc ctacctggag ggcctgtgcg tggagtcgct ccgcagatac ctggagaacg 1200 ggaaggagac gctgcagcgc gcgggtacca ggggcagtgg ggagccttcc ccatctccta 1260 taggtcgccg gggatggcct cccacgagaa gaggaggaaa atgggatcag cgctagaatg 1320 tcgccctccc ttgaatggag aatggcatga gttttcctga gtttcctctg agggccccct 1380 cttctctcta ggacaattaa gggatgacgt ctctgaggaa atggagggga agacagtccc 1440 tagaatactg atcaggggtc ccctttgacc cctgcagcag ccttgggaac cgtgactttt 1500 cctctcaggc cttgttctct gcctcacact cagtgtgttt ggggctctga ttccagcact 1560 tctgagtcac tttacctcca ctcagatcag gagcagaagt ccctgttccc cgctcagaga 1620 ctcgaacttt ccaatgaata ggagattatc ccaggtgcct gcgtccaggc tggtgtctgg 1680 gttctgtgcc ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg 1740 gtcctagggt gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga 1800 ccccccaaag acacatgtga cccaccaccc catctctgac catgaggtca ccctgaggtg 1860 ctgggccctg ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga 1920 ccaaactcag gacaccgagc ttgtggagac cagaccagca ggagatagaa ccttccagaa 1980 gtgggcagct gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca 2040 tgaggggctg ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata 2100 tctcttctca gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccttcc 2160 tttcccagag ccgtcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc 2220 tgtcctagca gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag 2280 ctcaggtagg gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca 2340 agccccaggt agaagtgttc cctgcctcat tactgggaag cagcatccac acaggggcta 2400 acgcagcctg ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga 2460 aggacggatg tatcaccttg gtggttgtgg tgttggggtc ctgattccag cattcatgag 2520 tcaggggaag gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac 2580 ttgctttcct cgtgtttcct gatcctgcct tgggtctgta gtcatacttc tggaaattcc 2640 ttttgggtcc aagacgagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc 2700 cctcacaggg cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg 2760 taagtgatgg gggcgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac 2820 gtctcctgcg ggctctgacc aggtcctgtt tttgttctac tccaggcagc gacagtgccc 2880 agggctctga tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggt 2940 ggggtggcag gtctgggggt gggtggggca gtggggaaag gcctgggtaa tggagattct 3000 ttgattggga tgtttcgcgt gtgtggtggg ctgtttagag tgtcatcact taccatgact 3060 aaccagaatt tgttcatgac tgttgttttc tgtagcctga gacagctgtc ttgtgaggga 3120 ctgagatgca ggatttcttc acgcctcccc tttgtgactt caaga 3165 //