Dbfetch
ID MG189568; SV 1; linear; genomic DNA; STD; HUM; 3336 BP. XX AC MG189568; XX DT 20-DEC-2017 (Rel. 135, Created) DT 20-DEC-2017 (Rel. 135, Last updated, Version 3) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A-A*33:16v allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3336 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT "Novel HLA Class I alleles"; RL Unpublished. XX RN [2] RP 1-3336 RA Lazaro A.M., Hou L., Enriquez E., Persaud M., Hurley C.K.; RT ; RL Submitted (11-OCT-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; 382f643b9ba53d0f5c72bf88bee430ad. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V2.5.0.8542; Sequencher v. V5.4.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3336 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01562" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <119..>3036 FT /gene="HLA-A" FT /allele="A*33:16v" FT mRNA join(<119..191,321..590,832..1107,1708..1983,2083..2199, FT 2640..2672,2815..2862,3032..>3036) FT /gene="HLA-A" FT /allele="A*33:16v" FT /product="MHC class I antigen" FT CDS join(119..191,321..590,832..1107,1708..1983,2083..2199, FT 2640..2672,2815..2862,3032..3036) FT /codon_start=1 FT /gene="HLA-A" FT /allele="A*33:16v" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A2H4WPZ0" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A2H4WPZ0" FT /protein_id="AUD08715.1" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAHSQIDRVDLGT FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYQQDAYDGKDYIALNEDLRSWTAAAMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRHLENGKETLQRTDPPRTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" XX SQ Sequence 3336 BP; 639 A; 963 C; 1007 G; 727 T; 0 other; ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcgtcgcggt 60 cgcggttcta aagtccgcac gcacccaccg ggactcagat tctccccaga cgccgaggat 120 ggccgtcatg gcgccccgaa ccctcctcct gctactcttg ggggccctgg ccctgaccca 180 gacctgggcg ggtgagtgcg gggtcgtggg gaaaccgcct ctgcggggag aagcaagggg 240 cccgcccggc gggggcgcag gacccgggta gccgcgccgg gaggagggtc gggcggatct 300 cagccactcc tcgcccccag gctcccactc catgaggtat ttcaccacat ccgtgtcccg 360 gcccggccgc ggggagcccc gcttcatcgc cgtgggctac gtggacgaca cgcagttcgt 420 gcggttcgac agcgacgccg cgagccagag gatggagccg cgggcgccgt ggatagagca 480 ggaggggccg gagtattggg accggaacac acggaatgtg aaggcccact cacagattga 540 ccgagtggac ctggggaccc tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc 600 ccagcccggg gcgcaggtca cgacctctca tcccccacgg acgggccagg tcacccacag 660 tctccgggtc cgagatccac cccgaagccg cgggaccccg agacccttgc cccgggagag 720 gcccaggcgc ctttacccgg tttcattttc agtttaggcc aaaaatcccc ccgggttggt 780 cggggccgga cggggctcgg gggactgggc tgaccgtggg gtcggggcca ggttctcaca 840 ccatccagat gatgtatggc tgcgacgtgg ggtcggacgg gcgcttcctc cgcgggtacc 900 agcaggacgc ctacgacggc aaggattaca tcgccttgaa cgaggacctg cgctcttgga 960 ccgcggcggc catggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg 1020 agcagttgag agcctacctg gagggcacgt gcgtggagtg gctccgcaga cacctggaga 1080 acgggaagga gacgctgcag cgcacgggta ccaggggcca cggggcgcct ccctgatcgc 1140 ctgtagatct cccgggctgg cctcccacaa ggaggggaga caattgggac caacactaga 1200 atatcaccct ccctctggtc ctgagggaga ggaatcctcc tgggtttcca gatcctgtac 1260 cagagagtga ctctgaggtt ccgccctgct ctgtgacaca attaagggat aaaatctctg 1320 aaggaatgac gggaagacga tccctcgaat actgatgagt ggttcccttt gacacacacc 1380 ggcagcagcc ttgggcccgt gacttttcct ctcaggcctt gttctctgct tcacactcaa 1440 tgtgtgtggg ggtctgagtc cagcacttct gagtccctca gcctccactc aggtcaggac 1500 cagaagtcgc tgttccctct tcagggacta gaattttcca cggaatagga gattatccca 1560 ggtgcctgtg tccaggctgg tgtctgggtt ctgtgctccc ttccccatcc caggtgtcct 1620 gtccattctc aagatagcca catgtgtgct ggaggagtgt cccattacag atgcaaaatg 1680 cctgaatgtt ctgactcttc ctgacagacc cccccaggac gcatatgact caccacgctg 1740 tctctgacca tgaggccacc ctgaggtgct gggccctgag cttctaccct gcggagatca 1800 cactgacctg gcagcgggat ggggaggacc agacccagga cacggagctc gtggagacca 1860 ggcctgcagg ggatggaacc ttccagaagt gggcgtctgt ggtggtgcct tctggacagg 1920 agcagagata cacctgccat gtgcagcatg agggtctccc caagcccctc accctgagat 1980 ggggtaagga gggagatggg ggtgtcatgt cttttaggga aagcaggagc ctctctgacc 2040 tttagcaggg tcagggcccc tcaccttccc ctcttttccc agagccgtct tcccagccca 2100 ccatccccat cgtgggcatc attgctggcc tagttctctt tggagctgtg ttcgctggag 2160 ctgtggtcgc tgctgtgagg tggaggagga agagctcagg tggggtgaag gggtgaaggg 2220 tgggtctgag atttcttgtc tcactgaggg ttccaagacc caggtagaag tgtgccctgc 2280 ctcgttactg ggaagcacca tccacaatta tgggcctacc cagcctgggc cctgtgtgcc 2340 agcacttact cttttgtaaa gcacctgtta aaatgaagga cagatttatc accttgatta 2400 tggcggtgat gggacctgat cccagcagtc acaagtcaca ggggaaggtc cctgaggacc 2460 ttcaggaggg cggttggtcc aggacccaca cctgctttct tcatgtttcc tgatcccgcc 2520 ctgggtctgc agtcacacat ttctggaaac ttctctgagg tccaagactt ggaggttcct 2580 ctaggacctt aaggccctgg ctcctttctg gtatctcaca ggacattttc ttcccacaga 2640 tagaaaagga gggagctact ctcaggctgc aagtaagtat gaaggaggat gatccaagaa 2700 atcactggga tattgtgttt gggagcccgt gggggagctc acccacccca caattcctcc 2760 tctagccaca tcttctgtgg gatctgacca ggttctgttt ttgtcctacc ccaggcagtg 2820 acagtgccca gggctctgat atgtctctca cagcttgtaa aggtgagagc ctggagggcc 2880 tgatgtgtgt tgggtgttgg gcggaacagt ggacgcagct gtgctatggg gtttctttgc 2940 attggatgta ttgagcatgc gatgggctgt ttaaagtgtg actcctcact gtgacagata 3000 cgaatttgtt catgaatatt tttttctata gtgtgagaca gctgccttgt gtgggactga 3060 gaggcaagat ttgttcctgc ccttcccttt gtgacttgaa gtaccctgac tttgtttctg 3120 caaaggcacc tgcatgtgtc tgtgttcttg taggcataat gtgaggaggt ggggagacca 3180 ccccaccccc atgtccacca tgaccctctt cccacgctga cctgtgctcc ctccccaatc 3240 atctttcctg ttccagagag gtggggctga ggtgtctcca tctctgcctc aacttcatgg 3300 tgcactgagc tgtaacttct tccttcccta ttaaaa 3336 //