Dbfetch
ID MG000168; SV 1; linear; genomic DNA; STD; HUM; 7271 BP. XX AC MG000168; XX DT 06-AUG-2018 (Rel. 137, Created) DT 17-APR-2019 (Rel. 140, Last updated, Version 2) XX DE Homo sapiens MHC class II antigen (HLA-DQB2) gene, HLA-DQB2*01050101 DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-7271 RA Alizadeh M.; RT ; RL Submitted (22-SEP-2017) to the INSDC. RL LNPRM, EFS, Rue Pierre Jean Gineste, Rennes, Bretagne 35016, France XX DR MD5; 660c7f3371051c52c0d4a1007f150e9d. XX CC ##Assembly-Data-START## CC Assembly Method :: Profiler HLA v. 0.0.0.1 Rev2.0.203 CC Assembly Name :: Profiler HLA CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7271 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..7271 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01050101" FT mRNA join(1..241,1689..1955,4483..4764,7152..7271) FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01050101" FT /product="MHC class II antigen" FT 5'UTR 1..144 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01050101" FT CDS join(145..241,1689..1955,4483..4764,7152..7165) FT /codon_start=1 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01050101" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A345F7E9" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A345F7E9" FT /protein_id="AXG24347.1" FT /translation="MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCYF FT TNGTERVRGVARYIYNREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAVDK FT VCRHNYEAELRTTLQRQVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVQWFRNDQ FT EETAGVVSTSFIRNGDWTFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWRLLH" FT 3'UTR 7166..7271 FT /gene="HLA-DQB2" FT /allele="HLA-DQB2*01050101" XX SQ Sequence 7271 BP; 1876 A; 1637 C; 1798 G; 1960 T; 0 other; tcctttccta gggactcccc aatcctacca cacatggaaa catccagagg tttttattct 60 ttccggcagg tacataagat ccattaggtt tgagctgtgt tgactaccac tgctttttcc 120 ttggtctcac ttacgtcttg gaagatggct ctgcagatcc ctggaggctt ttgggcagca 180 gctgtgaccg tgatgctggt gatgctgagc accccagtgg ctgaggccag agactttccc 240 agtaagtgca gggcagctgc tctcgagagc caccactgtg ggaacaggct ctccttgggt 300 tggagtatgg gggatggtga tctccatgat ctcagaacac agtcttttat caccatttat 360 tctttttggg aaatagagct atgttgcatt tttatttcca ccttataatg ggtgaggtga 420 ggataatcca accccaatcc cacaggttta agcctgaagg aggagagagg aaagaggaga 480 caaagtgtgc attcactacc tgtgacagga caaaatgacc atggcactcc acggttatgc 540 atttccccaa agatatgcat ttccccaaag acacagtagg atttttctgc actgggaaaa 600 tgtaaggcag caatggtgtc tgtagtctct gtattggagg taaaggagtc tatactactg 660 actcgagtgg agagtttgtg gaggcaaact cttagtactg agggaaggtg actggatgac 720 cacagacagg gagtcttact ttgggtttca ctgatttatg ggcaaaaggt gacttgagtg 780 ggattcaggg acctgagttg atggtggact gaatttagta tgataggaag gaggaagtaa 840 agaagggaaa taatacatat tgagaaacca ctccattcag acacaggaca gtactttcta 900 taaatcctct ctcactcctc ctaacatcct atgtgtaggt atcatgattt tccttttatg 960 taattatact tgtgatatgg atattctgtt aagtaacctg cccaagctgg tgattgactc 1020 agtttaattg gaccctatag aattcaaaag cttgggctct ttccatgaat aaatgtttcc 1080 ttctaggact ccggaggtgt aggtcctttc taacacagaa gtgagtgaac ctcacagggc 1140 acttgggcgg gtatagcaga aagagagtaa atccaggcat gggtttactt ggtctcttgc 1200 ccagggacca agagaatact tacatcagga tgagaacaag cttaattcct gaacctttct 1260 cgttattccc ttgaactctc aaatttatgt ggataactct gtctctgaga ttcccaagag 1320 ctccatggaa aatgggattt catacgagaa cgccctgatc taagagcaga ggtcaatgtc 1380 gaatcggtcc gactgccctc ttcacttggt tcacaggctc aggcagggac tgggctttcc 1440 ctcttacctc cctaaaggaa ggcagattcc cgaggccctc agagagggcg ggcagggctg 1500 gggcagagat gtctcgagga tcccaggtcc ggagcacgag gcacgggccc agccaagaac 1560 tcaatttcgc ttggacgggt ttcgcagctg ctggccgggt cagggcagcg gctgaagggt 1620 gcggtccggc tgggggctgg ggctagggcc gtgctggcgc ctgactgacc cgccgtgatt 1680 ctccgcagag gatttcttgg tccagtttaa gggcatgtgc tacttcacca acgggacaga 1740 gcgcgtgcgg ggtgtggcca gatacatcta taaccgcgag gagtacgggc gcttcgacag 1800 cgacgttggg gagttccagg cggtgaccga gctggggcgg agcatcgagg actggaacaa 1860 ctataaggac ttcttggagc aggagcgggc cgcggtggac aaggtgtgca gacacaacta 1920 cgaggcggag ctacgcacga ccttgcagcg gcaaggtgag cgtcgtcgtc cttccgcggt 1980 gctcaccctt ggccggggcc cgagtctctg cgcacagagg ggcgaggacg gcgcggcctc 2040 aaggaccgag ccctggtcca tcccagggta caggaaggtg gcggggattt ggaggctggg 2100 gtagtatcgg aggggcgggg atctagggca gagcaggggg atgcacaaaa gcatccctta 2160 gttccctgca gggttgggtt aggctgccca gtgtgtcccc agcctccccg tccatcggcc 2220 ttgtcctctg ctctgcatgt tcttgccttg tgccttatgc gtttgcctcc tcgtgcctta 2280 ccttcgctaa gcagttcttt ctgcccgaat gcccgccctc ttcccctgcc cgcccgcccc 2340 actagcactg ccccacccag caaggcccac ttgcacagct cgcgccgcag gaagcttcag 2400 gtttggcctg gtggagttag ggctgctcca caactgcgcg cagggcatcc agcaattaca 2460 gttgtgaaat aagatatttt aacttttggc ttcaaattat tattcatcgt aattctgttt 2520 tcttaaacgg ctctcattca tggcggagct ctttgaggtg agagtgtttt aatcattgca 2580 tgcctagtac ctgactcgtg gactggcatg tggtatgagc tcaatgatct tctgttaaat 2640 taatgaataa atgtactcag ctgcccatcc acttaggctc aagggaaagc agaggataaa 2700 tagagcctta aagatggact ttatcaatta ttttctatta ttttgcttga tgctttaaac 2760 tcttattgac ttggatctta gtaaggtttg tgaatgcagt ctagggaaaa aggtgtttgc 2820 tgaaaataaa aacaactctt gaatggtgtt ataaggcagt tttaatttct tagaaaagct 2880 gaacaaatgg cacaatgaaa agagcagaag ctttggaata catagattga agccactaaa 2940 ttattgaata aaaatagttt caggttgctt ttggagtaga ttttctccct ccccccatca 3000 ctatccactt cagggataaa cattctgaac gtcaatttta cccacttagt gagcacttat 3060 ttctagacaa ttgccttagc aaacaccatc taagttatgt catttaatag cacagttacc 3120 tgtgcattag agattagcat tgccacttta tatatcgtaa tattggtaca tgataaacac 3180 tttaagtaat caacccacaa ttatgcacca ggacctgaag cctcccccaa atacacagca 3240 ttcttttatg ttcttcaata ctcgtctaca cagcctaagg gaagtaaagc cttgttaaag 3300 ccaattttga caagaagcag caatgggtct attcctgcct gttttcactg ttaatgggac 3360 aaaatgatac tttcaaggca ttgaaaattc actgattaat caatccctag tctgacccca 3420 gtgttatcta tgcaggttca caaaacttcc ttgccttctt ctgacccaca tcctaatgct 3480 gtcaagtatt tatatttttg ccatttcaag tctatttcta taaaagttat tctatcattt 3540 ttttctcatg aatttgtgcc ctctattttt actttcagtc tttttaagat gaacaaatct 3600 tgtaagtccc cacatagctg actgttattt cagtcagact ccaggaagga gggcctaaag 3660 aaaagttcaa gtccaagcag aaaccaagat tccttccaga caatggctca agagtgccat 3720 ttaattgggg tgctacctgc tgacctcagc aaatcccagc tatatgtata tgtttgcatt 3780 acaggcacat tcacccaggc caacctctgc atggatctca gaatatttcc tatggagaac 3840 gtacatgata atgtctgatt tcagaacaag aaagtaattc tcaatagcaa ggggatggag 3900 tagggtaggc agctagtaat tacactatct tgagggttaa aaggaaatta agaaaaagca 3960 ggaaaatgag agaacatatt accaagtaaa taaagcatac attaaatatt tactataatt 4020 ttacactaaa gaaataaagg aaatgcagta aaatggccag agaggcaaag gttaagatgt 4080 ataaaatatg cagggaaagg tgtgtcattt ttgaccatga gcaccgctct gagaagataa 4140 aggaattgag ttatgggcaa acatgatgtt tgatcagtgt tcgttttttt caaggcctgc 4200 ctacttttcc ttcaaatatt acaaactttt gaaataacat tcaatttttt ggtctctgtt 4260 actagattgc aagttctata aaggcaggaa ccagggtttg ttgtttattt ttggattctc 4320 agtgattgtc aaatttatat ttgttgaagg aaccttaatc caagacttgg actccaggta 4380 tctttccatt ctggttccaa ggagggacct tcctcacagc aggcgtgctg tgtggtctca 4440 catctcactc ctatatcttt ccctgtctgt tactgccctc agtggagccc acagtgacca 4500 tctccccatc caggacagag gccctcaacc accacaacct gctggtctgc tcagtgacag 4560 atttctatcc agcccagatc aaagtccagt ggtttcggaa tgaccaggag gagacagccg 4620 gtgttgtgtc cacctccttc attaggaatg gtgactggac cttccagatt ctggtgatgc 4680 tggaaataac tccccagcgt ggagacatct acacctgcca agtggagcac cccagcctcc 4740 agagccccat caccgtggag tggcgtaagg ggaaactggt ttccttttac tgtgggcccc 4800 acaagacaaa gggaagagct cccgctgatc cttcccatcc catctcttgt ccctgacatc 4860 actactgagc tgggaatcac aggagactag agcacctgtt gccccatggc aagcacatca 4920 gatgaatcct gatctctttg tctttccaga taccagggag atcactttcc acatttgtgt 4980 tagtccattc ttgtactgct acaaagaaat ctctgagact gagtaattta taaagaaaag 5040 aggtttaatt ggctcttctc actccactat aaagaaatac ctgagaatgg gtaatttata 5100 aagagaagag gtttaattgg cttatgattc tgaggctgta ggggaagcat agtggcttct 5160 gcttatgggg agacatatgg aagctcctaa tcatggcaga aggaaaagag ggagtgaggt 5220 gtctcacagg gcaggggcag gagcatgaga gagagggggt tggtgctacg cagttttaca 5280 taaccagatc tcatgagaac tcactattgt aatgacagta ctaagggaga tggtgacaag 5340 aatctggtct aatgatccag tcacctccca ccaggctcta cctccaacat tgttgattac 5400 aattgaacat gaaatttggg tggggccaca gaatcaaacc atatcaacac tactaaagcc 5460 ccagaaccag ctctgacagc tatgagagac tgacttaggg ctggtgactg gggccttagg 5520 gtttaaggtt atggatgaag tcctgagggg caggggtgtg cttcctcctc tccctcaccc 5580 acctattgtg tccaaagacc tactggctgg tctttctctt ccctagggtg gtcagactgg 5640 agaactagtg tcccctgaca tctccacctc ctgtaccaag gacattatgg ggtgtgggga 5700 caaacactca cactcaggct ctgctcctta ggggctcagt ctgaatctgc ccagagcaag 5760 atgctgggtg gtgttggagg cttcgtgctg gggctgatct tcctcgggct gggccttatc 5820 atccgtcaca ggggtcagaa aggtgaggaa cccaaggggg aaatggggga agatgggctg 5880 tgacccagac cctctattca gagaggttct gtctctagat gtagctcttt cctccttacc 5940 ctgagaggaa gtgcgaggag acaggacaag attggaggag gcattggaat ctgattttac 6000 tgggtgaatg gtagcgctgc cagagctgac tgatagagct tattccaggg cgtccttacc 6060 gttcatcatc gtctcactgg ctcctttcta aaagcttcct ccattaagag ggtcagagcc 6120 tcggcctcct tgtcttctag tgacaatttc ctttgttttg ggggatttta acttagggtg 6180 cttaaggact taaagaacac gggagggaag aggatataac cccaattaaa ctacatgtgt 6240 cattttcctt tggggtaaga tagtggttgt ttgtttaaca agacctttct ctgtataact 6300 tccttttgta ggacctcgag ggcctccacc tgcaggtaat atttcagcca tgatccagtc 6360 aggggagagg gcacaggcat aagagggaag agccatggtg aaaccgcatc tctactaaaa 6420 atacaaaaat tagctggacg tggtggtgtg catctgtaat cccggctact tgggaggttg 6480 aggcaagaga atcacttgaa cccaggaggc agaggttgca gtgagccaag atggcgccac 6540 tgcactccag tctgggcgat agagctagag tctgtctcaa aaaaaaaaaa aagaagagca 6600 tgagcggagt gttccagggc acagtggtct ctgttcatgg cctgtttgct gctatgaggg 6660 ttaagactta ggggagaagt ttgccagttt ctacgaatct ccagagattg tttcctagaa 6720 ccaggcctta actttggtgg catctttttg tgaaatgtgg ggacagagcc acatcttgaa 6780 tgtgagatag tagggtgatg cccactttgt gccacatttt gttagctact gcctgtaggc 6840 attttcagtg actaaaagag gctgctagtg gtggagatga agtgtcaccc aatttactaa 6900 aaaaatcaaa ctcttcatat tacccagaag ggtaactgct gttcccccac ctccacatat 6960 ctgcatcaag ctgaagttct gtgtcctcat gagctgattt tacctttaca cagatattgg 7020 ggaacgtgat gatgatatgc cctggacctc agcatcctct gtttgatgct gcagaggaaa 7080 ctcaggactg ggggagaggg tgtgtccctc agggtaccct gtgctgatca tgcctcatct 7140 ctcttctcca ggactcctgc actgactcct gaggactttt gtctgggatt ggtcatcact 7200 cttctgtaat gcccacctgc ccctgcccag aattcctagc tgcctgtgtc atcctgtccc 7260 actgaggtca g 7271 //