Dbfetch
ID MF382082; SV 1; linear; genomic DNA; STD; HUM; 3359 BP. XX AC MF382082; XX DT 18-AUG-2017 (Rel. 133, Created) DT 18-AUG-2017 (Rel. 133, Last updated, Version 1) XX DE Homo sapiens isolate NT01432 MHC class I antigen (HLA-A) gene, HLA-A*02:18v DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3359 RA Lazaro A.M., Hou L., Gerfen J., Enriquez E., Hurley C.K.; RT ; RL Submitted (23-JUN-2017) to the INSDC. RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program, RL 11333 Woodglen Dr, Rockville, MD 20852, USA XX DR MD5; 389c953dab7a2fa718dfe7d7914cb070. XX CC ##Assembly-Data-START## CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v. CC V2.5.0.8542; Sequencher v. V5.4.1 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3359 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="NT01432" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <1..>3359 FT /gene="HLA-A" FT /allele="HLA-A*02:18v" FT mRNA join(<143..215,346..615,857..1132,1733..2008,2108..2224, FT 2663..2695,2838..2885,3055..>3059) FT /gene="HLA-A" FT /allele="HLA-A*02:18v" FT /product="MHC class I antigen" FT CDS join(143..215,346..615,857..1132,1733..2008,2108..2224, FT 2663..2695,2838..2885,3055..3059) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:18v" FT /product="MHC class I antigen" FT /db_xref="GOA:A0A223FKY8" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:A0A223FKY8" FT /protein_id="AST08318.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMCGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADKA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" XX SQ Sequence 3359 BP; 651 A; 965 C; 1017 G; 726 T; 0 other; atcctggata ctcacgacgc ggacccagtt ctcactccca ttgggtgtcg ggtttccaga 60 gaagccaatc agtgtcgtcg cggtcgcggt tctaaagtcc gcacgcaccc accgggactc 120 agattctccc cagacgccga ggatggccgt catggcgccc cgaaccctcg tcctgctact 180 ctcgggggct ctggccctga cccagacctg ggcgggtgag tgcggggtcg ggagggaaac 240 ggcctctgtg gggagaagca acgggcccgc ctggcggggg cgcaggaccc gggaagccgc 300 gccgggagga gggtcgggcg ggtctcagcc actcctcgtc cccaggctct cactccatga 360 ggtatttctt cacatccgtg tcccggcccg gccgcgggga gccccgcttc atcgcagtgg 420 gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga cgccgcgagc cagaggatgg 480 agccgcgggc gccgtggata gagcaggagg gtccggagta ttgggacggg gagacacgga 540 aagtgaaggc ccactcacag actcaccgag tggacctggg gaccctgcgc ggctactaca 600 accagagcga ggccggtgag tgaccccggc ccggggcgca ggtcacgacc tctcatcccc 660 cacggacggg ccaggtcgcc cacagtctcc gggtccgaga tccgccccga agccgcggga 720 ccccgagacc cttgccccgg gagaggccca ggcgccttta cccggtttca ttttcagttt 780 aggccaaaaa tccccccagg ttggtcgggg cggggcgggg ctcgggggac cgggctgacc 840 gcggggtccg ggccaggttc tcacaccgtc cagaggatgt gtggctgcga cgtggggtcg 900 gactggcgct tcctccgcgg gtaccaccag tacgcctacg acggcaagga ttacatcgcc 960 ctgaaagagg acctgcgctc ttggaccgcg gcggacaagg cagctcagac caccaagcac 1020 aagtgggagg cggcccatgt ggcggagcag ttgagagcct acctggaggg cacgtgcgtg 1080 gagtggctcc gcagatacct ggagaacggg aaggagacgc tgcagcgcac gggtaccagg 1140 ggccacgggg cgcctccctg atcgcctgta gatctcccgg gctggcctcc cacaaggagg 1200 ggagacaatt gggaccaaca ctagaatatc gccctccctc tggtcctgag ggagaggaat 1260 cctcctgggt ttccagatcc tgtaccagag agtgactctg aggttccgcc ctgctctctg 1320 acacaattaa gggataaaat ctctgaagga atgacgggaa gacgatccct cgaatactga 1380 tgagtggttc cctttgacac acacaggcag cagccttggg cccgtgactt ttcctctcag 1440 gccttgttct ctgcttcaca ctcaatgtgt gtgggggtct gagtccagca cttctgagtc 1500 cttcagcctc cactcaggtc aggaccagaa gtcgctgttc cctcttcagg gactagaatt 1560 ttccacggaa taggagatta tcccaggtgc ctgtgtccag gctggtgtct gggttctgtg 1620 ctcccttccc catcccaggt gtcctgtcca ttctcaagat agccacatgt gtgctggagg 1680 agtgtcccat gacagatgca aaatgcctga atgatctgac tcttcctgac agacgccccc 1740 aaaacgcata tgactcacca cgctgtctct gaccatgaag ccaccctgag gtgctgggcc 1800 ctgagcttct accctgcgga gatcacactg acctggcagc gggatgggga ggaccagacc 1860 caggacacgg agctcgtgga gaccaggcct gcaggggatg gaaccttcca gaagtgggcg 1920 gctgtggtgg tgccttctgg acaggagcag agatacacct gccatgtgca gcatgagggt 1980 ttgcccaagc ccctcaccct gagatggggt aaggagggag acgggggtgt catgtctttt 2040 agggaaagca ggagcctctc tgacctttag cagggtcagg gcccctcacc ttcccctctt 2100 ttcccagagc cgtcttccca gcccaccatc cccatcgtgg gcatcattgc tggcctggtt 2160 ctctttggag ctgtgatcac tggagctgtg gtcgctgctg tgatgtggag gaggaagagc 2220 tcaggtgggg aaggggtgaa gggtgggtct gagatttctt gtctcactga gggttccaag 2280 acccaggtag aagtgtgccc tgcctcgtta ctgggaagca ccacccacaa ttatgggcct 2340 acccagcctg ggccctgtgt gccagcactt actcttttgt aaagcacctg ttaaaatgaa 2400 ggacagattt atcaccttga ttacagcggt gatgggacct gatcccagca gtcacaagtc 2460 acaggggaag gtccctgagg accttcagga gggcggttgg tccaggaccc acacctgctt 2520 tcttcatgtt tcctgatccc gccctgggtc tgcagtcaca catttctgga aacttctctg 2580 aggtccaaga cttggaggtt cctctaggac cttaaggccc tgactccttt ctggtatctc 2640 acaggacatt ttcttcccac agatagaaaa ggagggagct actctcaggc tgcaagtaag 2700 tatgaaggag gctgatgcct gaggtccttg ggatattgtg tttgggagcc catgggggag 2760 ctcacccacc ccacaattcc tcctctagcc acatcttctg tgggatctga ccaggttctg 2820 tttttgttct accccaggca gtgacagtgc ccagggctct gatgtgtctc tcacagcttg 2880 taaaggtgag agcctggagg gcctgatgtg tgttgggtgt tgggcggaac agtggacaca 2940 gctgtgctat ggggtttctt tccattggat gtattgagca tgcgatgggc tgtttaaagt 3000 gtgacccctc actgtgacag atacgaattt gttcatgaat atttttttct atagtgtgag 3060 acagctgcct tgtgtgggac tgagaggcaa gagttgttcc tgcccttccc tttgtgactt 3120 gaagaaccct gactttgttt ctgcaaaggc acctgcatgt gtctgtgttc gtgtaggcat 3180 aatgtgagga ggtggggaga ccaccccacc cccatgtcca ccatgaccct cttcccacgc 3240 tgacctgtgc tccctcccca atcatctttc ctgttccaga gaggtggggc tgaggtgtct 3300 ccatctctgt ctcaacttca tggtgcactg agctgtaact tcttccttcc ctattaaaa 3359 //