Dbfetch
ID MF382080; SV 1; linear; genomic DNA; STD; HUM; 3345 BP.
XX
AC MF382080;
XX
DT 18-AUG-2017 (Rel. 133, Created)
DT 18-AUG-2017 (Rel. 133, Last updated, Version 1)
XX
DE Homo sapiens isolate NT01430 MHC class I antigen (HLA-A) gene,
DE HLA-A*01:03:01:02v allele, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-3345
RA Lazaro A.M., Hou L., Gerfen J., Enriquez E., Hurley C.K.;
RT ;
RL Submitted (23-JUN-2017) to the INSDC.
RL Oncology, C.W.Bill Young DoD Marrow Donor Recruitment and Research Program,
RL 11333 Woodglen Dr, Rockville, MD 20852, USA
XX
DR MD5; 79c6abae78eac64d448930ea02cb3e91.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: Assign TruSight v. HLA2.1.0.934; GenDex v.
CC V2.5.0.8542; Sequencher v. V5.4.1
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..3345
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /isolate="NT01430"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene <1..>3345
FT /gene="HLA-A"
FT /allele="HLA-A*01:03:01:02v"
FT mRNA join(<143..215,346..615,857..1132,1712..1987,2090..2206,
FT 2649..2681,2824..2871,3041..>3045)
FT /gene="HLA-A"
FT /allele="HLA-A*01:03:01:02v"
FT /product="MHC class I antigen"
FT CDS join(143..215,346..615,857..1132,1712..1987,2090..2206,
FT 2649..2681,2824..2871,3041..3045)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*01:03:01:02v"
FT /product="MHC class I antigen"
FT /db_xref="GOA:C5IWX4"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:C5IWX4"
FT /protein_id="AST08316.1"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT
FT LRGYYNQSEDGSHTIQMMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT AQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
XX
SQ Sequence 3345 BP; 640 A; 960 C; 1021 G; 724 T; 0 other;
atcctggata ctcacgacgc ggacccagtt ctcactccca ttgggtgtcg ggtttccaga 60
gaagccaatc agtgtcgtcg cggtcgctgt tctaaagtcc gcacgcaccc accgggactc 120
agattctccc cagacgccga ggatggccgt catggcgccc cgaaccctcc tcctgctact 180
ctcgggggcc ctggccctga cccagacctg ggcgggtgag tgcggggtcg ggagggaaac 240
cgcctctgcg gggagaagca aggggccctc ctggcggggg cgcaggaccg ggggagccgc 300
gccgggagga gggtcgggca ggtctcagcc actgctcgcc cccaggctcc cactccatga 360
ggtatttctt cacatccgtg tcccggcccg gccgcgggga gccccgcttc atcgccgtgg 420
gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga cgccgcgagc cagaagatgg 480
agccgcgggc gccgtggata gagcaggagg ggccggagta ttgggaccag gagacacgga 540
atatgaaggc ccactcacag actgaccgag cgaacctggg gaccctgcgc ggctactaca 600
accagagcga ggacggtgag tgaccccggc ccggggcgca ggtcacgacc cctcatcccc 660
cacggacggg ccaggtcgcc cacagtctcc gggtccgaga tccaccccga agccgcggga 720
ctccgagacc cttgtcccgg gagaggccca ggcgccttta cccggtttca ttttcagttt 780
aggccaaaaa tccccccggg ttggtcgggg cggggcgggg ctcgggggac tgggctgacc 840
gcggggtcgg ggccaggttc tcacaccatc cagatgatgt atggctgcga cgtggggccg 900
gacgggcgct tcctccgcgg gtaccggcag gacgcctacg acggcaagga ttacatcgcc 960
ctgaacgagg acctgcgctc ttggaccgcg gcggacatgg cagctcagat caccaagcgc 1020
aagtgggagg cggtccatgc ggcggagcag cggagagtct acctggaggg ccggtgcgtg 1080
gacgggctcc gcagatacct ggagaacggg aaggagacgc tgcagcgcac gggtaccagg 1140
ggccacgggg cgcctccctg atcgcctata gatctcccgg gctggcctcc cacaaggagg 1200
ggagacaatt gggaccaaca ctagaatatc accctccctc tggtcctgag ggagaggaat 1260
cctcctgggt ttccagatcc tgtaccagag agtgactctg aggttccgcc ctgctctctg 1320
acacaattaa gggataaaat ctctgaagga gtgacgggaa gacgatccct cgaatactga 1380
tgagtggttc cctttgacac cggcagcagc cttgggcccg tgacttttcc tctcaggcct 1440
tgttctctgc ttcacactca atgtgtgtgg gggtctgagt ccagcacttc tgagtctctc 1500
agcctccact caggtcagga ccagaagtcg ctgttccctt ctcagggaat agaagattat 1560
cccaggtgcc tgtgtccagg ctggtgtctg ggttctgtgc tctcttcccc atcccgggtg 1620
tcctgtccat tctcaagatg gccacatgcg tgctggtgga gtgtcccatg acagatgcaa 1680
aatgcctgaa ttttctgact cttcccgtca gaccccccca agacacatat gacccaccac 1740
cccatctctg accatgaggc caccctgagg tgctgggccc tgggcttcta ccctgcggag 1800
atcacactga cctggcagcg ggatggggag gaccagaccc aggacacgga gctcgtggag 1860
accaggcctg caggggatgg aaccttccag aagtgggcgg ctgtggtggt gccttctgga 1920
gaggagcaga gatacacctg ccatgtgcag catgagggtc tgcccaagcc cctcaccctg 1980
agatggggta aggagggaga tgggggtgtc atgtctctta gggaaagcag gagcctctct 2040
ggagaccttt agcagggtca gggcccctca ccttcccctc ttttcccaga gctgtcttcc 2100
cagcccacca tccccatcgt gggcatcatt gctggcctgg ttctccttgg agctgtgatc 2160
actggagctg tggtcgctgc tgtgatgtgg aggaggaaga gctcaggtgg agaaggggtg 2220
aagggtgggg tctgagattt cttgtctcac tgagggttcc aagtcccagc tagaaatgtg 2280
ccctgtctca ttactgggaa gcaccttcca caatcatggg ccgacccagc ctgggccctg 2340
tgtgccagca cttactcttt tgtaaagcac ctgttaaaat gaaggacaga tttatcacct 2400
tgattacggc ggtgatggga cctgatccca gcagtcacaa gtcacagggg aaggtccctg 2460
aggacagacc tcaggagggc tattggtcca ggacccacac ctgctttctt catgtttcct 2520
gatcccgccc tgggtctgca gtcacacatt tctggaaact tctctggggt ccaagactag 2580
gaggttcctc taggacctta aggccctggc tcctttctgg tatctcacag gacattttct 2640
tcccacagat agaaaaggag ggagttacac tcaggctgca agtaagtatg aaggaggctg 2700
atgcctgagg tccttgggat attgtgtttg ggagcccatg ggggagctca cccaccccac 2760
aattcctcct ctagccacat cttctgtggg atctgaccag gttctgtttt tgttctaccc 2820
caggcagtga cagtgcccag ggctctgatg tgtctctcac agcttgtaaa ggtgagagct 2880
tggagggcct gatgtgtgtt gggtgttggg tggaacagtg gacacagctg tgctatgggg 2940
tttctttgcg ttggatgtat tgagcatgcg atgggctgtt taaggtgtga cccctcactg 3000
tgatggatat gaatttgttc atgaatattt ttttctatag tgtgagacag ctgccttgtg 3060
tgggactgag aggcaagagt tgttcctgcc cttccctttg tgacttgaag aaccctgact 3120
ttgtttctgc aaaggcacct gcatgtgtct gtgttcgtgt aggcataatg tgaggaggtg 3180
gggagagcac cccaccccca tgtccaccat gaccctcttc ccacgctgac ctgtgctccc 3240
tctccaatca tctttcctgt tccagagagg tggggctgag gtgtctccat ctctgtctca 3300
acttcatggt gcactgagct gtaacttctt ccttccctat taaaa 3345
//