Dbfetch
ID MF069235; SV 1; linear; genomic DNA; STD; HUM; 2796 BP. XX AC MF069235; XX DT 02-MAY-2018 (Rel. 136, Created) DT 02-MAY-2018 (Rel. 136, Last updated, Version 2) XX DE Homo sapiens isolate 1474-7416-7 MHC class II antigen (HLA-DRB1) gene, DE partial cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-2796 RA Yin Y., Takemura P., Bolon Y.-T., Springer B., Saito K., Reed E.F., RA Zhang Q.J.; RT "Advances in HLA clinical relevant exon novelty detection from over 21,000 RT donor recruitment samples"; RL Unpublished. XX RN [2] RP 1-2796 RA Yin Y., Reed E.F., Bolon Y.-T., Zhang Q.J.; RT ; RL Submitted (05-MAY-2017) to the INSDC. RL Department of Pathology and Laboratory Medicine, UCLA Immunogenetics RL Center, 1000 Veteran Ave, LA, CA 90095, USA XX DR MD5; 84c963fe00f06f4cad6df190f53f1499. XX CC ##Assembly-Data-START## CC Assembly Method :: GenDx NGSengine v. 2.4.0; Omixon Twin v. CC 1.0.7 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2796 FT /organism="Homo sapiens" FT /isolate="1474-7416-7" FT /mol_type="genomic DNA" FT /isolation_source="buccal-extracted" FT /db_xref="taxon:9606" FT gene <1..>2796 FT /gene="HLA-DRB1" FT mRNA join(<1..270,2515..>2796) FT /gene="HLA-DRB1" FT /product="MHC class II antigen" FT CDS join(<1..270,2515..>2796) FT /codon_start=3 FT /gene="HLA-DRB1" FT /product="MHC class II antigen" FT /db_xref="GOA:A0A2S0SZ78" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:A0A2S0SZ78" FT /protein_id="AWB14564.1" FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFYNQEEYVRFDSDVGEFRAV FT TELGRPDEEYWNSQKDFLEDRRAAVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG FT EVYTCQVEHPSVTSPLTVEW" XX SQ Sequence 2796 BP; 727 A; 500 C; 691 G; 878 T; 0 other; cacgtttctt ggagtactct acgtctgagt gtcatttctt caatgggacg gagcgggtgc 60 ggttcctgga cagatacttc tataaccaag aggagtacgt gcgcttcgac agcgacgtgg 120 gggagttccg ggcggtgacg gagctggggc ggcctgatga ggagtactgg aacagccaga 180 aggacttcct ggaagacagg cgggccgcgg tggacaccta ctgcagacac aactacgggg 240 ttgtggagag cttcacagtg cagcggcgag gtgagcgcgg cgcggggcgg ggcctgagtc 300 cctgtgagct gggaatctga gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 360 gtgtgtgtga gagagagaca gagagacaga gagagagaga gcgccatctg tgagcattta 420 gaatcctctc tatcctgagc aaggagttct gagggcacag gtgtgtgtgt agagtgtgga 480 tttgtctgtg tctgtgaggc tgttgtggga ggggaggcag gagggggctg cttcttattc 540 ttggaggact ctgtggggag gtgacaaggg aggtgggtgc gggcggctgg agagagaggt 600 gaccttgatt gtctcgggtc cttagagatg cagggaaggg aaatgtaagg ggtgtgtggt 660 tggggtgaag gtttagggga ggagagctga ggggtaagga aggtttggga taatgtgagg 720 aggccagttc cagactgtcc ctggcacaca cccttcatgt aatctctgaa ataaaagtgt 780 gtgctgtttg tttgtaaaag cattagatta atttctaggg gaattgagga gacctctgag 840 gcatctctga agcttcttta ggtctaaatt tcttgctagt tttttgtttt ttattgtgta 900 tatttttaca tagtagaaat gactgtgaaa ctaacttttt gaattaaagt tttaacacag 960 ttactatttt attataatgc taatagtttt ctagtagtta catattattc ttttatatat 1020 aatagttgtg acacaactta cctcactttc ccctttgttg acctttatta tgacattcac 1080 caaaatttga aaatgtatgt ttctggttaa tttttaattt atattttttt catttataat 1140 tcttttgaat tattttgacc tatttattgg ccagttttaa taactgctgt aagaattccc 1200 tattgtattt ggtagggaat ggacaatgat ctactgccta atatctcgag ggcttagtat 1260 ttttctcagt gactttgtgg gttctttgta ctgtgagatt attaacactt tattgatatt 1320 tgattcagca tttgctccag tttgtggttt gtatgttgat tttgaaaatt cttttccatg 1380 ttaagaattt gaacattttt atataataaa atatgttgca aaatttttat taatgattta 1440 caatccatct taaatctgcc attttgtggt attgttgtct ccaggtttct ccttacttct 1500 aaaaaaaatt gcatttattg agagtctgct agtgttaggg attttcctgg gcataagcac 1560 cccaagtgac gagtcccaga cactgcctta atccaaatgt gattctggaa agaaaaatca 1620 ttttacaatg ataggcctaa taataattaa gcttgtgttg catgggagat gcattgatca 1680 gctaaatgta aatataagaa ctttcaaaac taaaatgacg ttccttaatc cttctctctg 1740 ctttatgact catgcttttc tgggaaagta aaaatttgga gaatcatttc tgtctgtccc 1800 accttcccag gggcagaacc atttctgtgg tgttctaagg tgtgagtgca tggcggtagt 1860 attcctaaaa attcatattc ggtttcgtca tgtacccaac tctgtcccgt tatctatcaa 1920 cattgtttta aatcatatat ttctgtcaag gtgtacaagg atgataaata ggtgccaagt 1980 ggagcaccca agtgtgatga gccccctcac agtggaatgg agtgtgaagc tttatgacct 2040 cataaattga aggttatctt cagtcattgt tttatatatt ttacatgcat taatcctcat 2100 ataatcccaa gaggtaaatt agtataatta tccttcatta taggtgacaa agttgagaca 2160 cagaagaatc gaactcttaa ggcagacctt ggatttgaac caggcaacct ggctcagata 2220 tcagttttaa ttactacact ctgtactttc aaagatttgt aaacactttg acaatgcatg 2280 acaatttcaa gctatgaaga aacaaacaca atttttcaca atatctctca aatctaatag 2340 gtcctcacta tcaagattaa gttccaggct gatgacactg taaggccaca tggccagctg 2400 tgctggaggc ctggtcaagg tcagagcctg ggtttgcaga gaagcagaca aacagccaaa 2460 caaggagact tactctgtct tcatgactca ttccctctac cttttttctc ctagtccatc 2520 ctaaggtgac tgtgtatcct tcaaagaccc agcccctgca gcaccacaac ctcctggtct 2580 gttctgtgag tggtttctat ccaggcagca ttgaagtcag gtggttccgg aatggccagg 2640 aagagaagac tggggtggtg tccacaggcc tgatccacaa tggagactgg accttccaga 2700 ccctggtgat gctggaaaca gttcctcgga gtggagaggt ttacacctgc caagtggagc 2760 acccaagtgt gacaagccct ctcacagtgg aatgga 2796 //