Dbfetch
ID MF069211; SV 1; linear; genomic DNA; STD; HUM; 2666 BP.
XX
AC MF069211;
XX
DT 02-MAY-2018 (Rel. 136, Created)
DT 02-MAY-2018 (Rel. 136, Last updated, Version 2)
XX
DE Homo sapiens isolate 1735-6860-1 MHC class I antigen (HLA-B) gene, complete
DE cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-2666
RA Yin Y., Takemura P., Bolon Y.-T., Springer B., Saito K., Reed E.F.,
RA Zhang Q.J.;
RT "Advances in HLA clinical relevant exon novelty detection from over 21,000
RT donor recruitment samples";
RL Unpublished.
XX
RN [2]
RP 1-2666
RA Yin Y., Reed E.F., Bolon Y.-T., Zhang Q.J.;
RT ;
RL Submitted (05-MAY-2017) to the INSDC.
RL Department of Pathology and Laboratory Medicine, UCLA Immunogenetics
RL Center, 1000 Veteran Ave, LA, CA 90095, USA
XX
DR MD5; afe18886f9fd2ad5025c0dc197546b14.
DR EuropePMC; PMC6542842; 31147565.
XX
CC ##Assembly-Data-START##
CC Assembly Method :: GenDx NGSengine v. 2.4.0; Omixon Twin v.
CC 1.0.7
CC Sequencing Technology :: Illumina
CC ##Assembly-Data-END##
XX
FH Key Location/Qualifiers
FH
FT source 1..2666
FT /organism="Homo sapiens"
FT /isolate="1735-6860-1"
FT /mol_type="genomic DNA"
FT /isolation_source="buccal-extracted"
FT /db_xref="taxon:9606"
FT gene <1..>2666
FT /gene="HLA-B"
FT mRNA join(<1..73,202..471,718..993,1566..1832,1926..2042,
FT 2484..2516,2623..>2666)
FT /gene="HLA-B"
FT /product="MHC class I antigen"
FT CDS join(1..73,202..471,718..993,1566..1832,1926..2042,
FT 2484..2516,2623..2666)
FT /codon_start=1
FT /gene="HLA-B"
FT /product="MHC class I antigen"
FT /db_xref="GOA:A0A2S0SYT1"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR010579"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:A0A2S0SYT1"
FT /protein_id="AWB14538.1"
FT /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRENLRI
FT ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTETRPAGDRTFQKWAAVVVPSGEEQRYTCH
FT VQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGS
FT YSQAASSDSAQGSDVSLTA"
XX
SQ Sequence 2666 BP; 501 A; 795 C; 839 G; 531 T; 0 other;
atgctggtca tggcgccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc 60
gagacctggg ccggtgagtg cgggtcggga gggaaatggc ctctgccggg aggagcgagg 120
ggaccgcagg cgggggcgca ggacctgagg agccgcgccg ggaggagggt cgggcgggtc 180
tcagcccctc ctcgccccca ggctcccact ccatgaggta tttctacacc tccgtgtccc 240
ggcccggccg cggggagccc cgcttcatct cagtgggcta cgtggacgac acgcagttcg 300
tgaggttcga cagcgacgcc gcgagtccga gagaggagcc gcgggcgccg tggatagagc 360
aggaggggcc ggaatattgg gaccggaaca cacagatctg caagaccaac acacagactt 420
accgagagaa cctgcggatc gcgctccgct actacaacca gagcgaggcc ggtgagtgac 480
cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga 540
gtctccgggt ccgagatccg cctccctgag gccgcgggac ccgcccagac cctcgaccgg 600
cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg 660
ttggtcgggg cggggcgggg ctcgggggga cggggctgac cgcggggccg gggccagggt 720
ctcacaccct ccagaggatg tacggctgcg acgtggggcc ggacgggcgc ctcctccgcg 780
ggcataacca gttcgcctac gacggcaagg attacatcgc cctgaacgag gacctgagct 840
cctggaccgc ggcggacacc gcggctcaga tcacccagcg caagtgggag gcggcccgtg 900
tggcggagca gctgagaacc tacctggagg gcacgtgcgt ggagtggctc cgcagatacc 960
tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc 1020
catctcctat aggtcgccgg ggatggcctc caacgagaag aagaggaaaa tgggatcagc 1080
gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga 1140
gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa 1200
gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc 1260
atgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat 1320
tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc tctgttcccc 1380
gctcagagac tcgaactttc caatgaatag attatcccag gtgcctgcgt ccaggctggt 1440
gtctgggttc tgtgcccctt ccccacccca ggtgtcctgt ccattctcag gctggtcaca 1500
tgggtggtcc tagggtgtcc catgagagat gcaaagcgcc tgaattttct gactcttccc 1560
atcagacccc ccaaagacac atgtgaccca ccaccccatc tctgaccatg aggccaccct 1620
gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1680
cgaggaccaa actcaggaca ccgagaccag accagcagga gacagaacct tccagaagtg 1740
ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga 1800
ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct 1860
cttctcaggg aaagcaggag cccttcagca gggtcagggc ccctcatctt cccctccttt 1920
cccagagcca tcttcccagt ccaccgtccc catcgtgggc attgttgctg gcctggctgt 1980
cctagcagtt gtggtcatcg gagctgtggt cgctgctgtg atgtgtagga ggaagagttc 2040
aggtagggaa ggggtgaggg gtggggtctg ggttttcttg tcccactggg ggtttcaagc 2100
cccaggtaga agtgttccct gcatcattac tgggaagcag catgcacaca ggggctaacg 2160
cagcctggga ccctgtgtgc cagcacttac tcttttgtgc agcacatgtg acaatgaagg 2220
acggatgtat caccttgatg gttgtggtgt tggggtcctg attccagcat tcatgagtca 2280
ggggaaggtc cctgctaagg acagacctta ggagggcagt tggtccagga cccacacttg 2340
ctttcctcgt gtttcctgat cctgccctgg gtctgtagtc atacttctgg aaattccttt 2400
tgggtccaag actaggaggt tcctctaaga tctcatggcc ctgcttcctc ccagtcccct 2460
cacaggacat tttcttccca caggtggaaa aggagggagc tactctcagg ctgcgtgtaa 2520
gtggtggggg tgggagtgtg gaggagctca cccaccccat aattcctcct gtcccacgtc 2580
tcctgtgggc tctgaccagg tcctgttttt gttctactcc agccagcgac agtgcccagg 2640
gctctgatgt gtctctcaca gcttga 2666
//