Dbfetch

ID   MF069211; SV 1; linear; genomic DNA; STD; HUM; 2666 BP.
XX
AC   MF069211;
XX
DT   02-MAY-2018 (Rel. 136, Created)
DT   02-MAY-2018 (Rel. 136, Last updated, Version 2)
XX
DE   Homo sapiens isolate 1735-6860-1 MHC class I antigen (HLA-B) gene, complete
DE   cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-2666
RA   Yin Y., Takemura P., Bolon Y.-T., Springer B., Saito K., Reed E.F.,
RA   Zhang Q.J.;
RT   "Advances in HLA clinical relevant exon novelty detection from over 21,000
RT   donor recruitment samples";
RL   Unpublished.
XX
RN   [2]
RP   1-2666
RA   Yin Y., Reed E.F., Bolon Y.-T., Zhang Q.J.;
RT   ;
RL   Submitted (05-MAY-2017) to the INSDC.
RL   Department of Pathology and Laboratory Medicine, UCLA Immunogenetics
RL   Center, 1000 Veteran Ave, LA, CA 90095, USA
XX
DR   MD5; afe18886f9fd2ad5025c0dc197546b14.
DR   EuropePMC; PMC6542842; 31147565.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: GenDx NGSengine v. 2.4.0; Omixon Twin v.
CC                            1.0.7
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2666
FT                   /organism="Homo sapiens"
FT                   /isolate="1735-6860-1"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="buccal-extracted"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>2666
FT                   /gene="HLA-B"
FT   mRNA            join(<1..73,202..471,718..993,1566..1832,1926..2042,
FT                   2484..2516,2623..>2666)
FT                   /gene="HLA-B"
FT                   /product="MHC class I antigen"
FT   CDS             join(1..73,202..471,718..993,1566..1832,1926..2042,
FT                   2484..2516,2623..2666)
FT                   /codon_start=1
FT                   /gene="HLA-B"
FT                   /product="MHC class I antigen"
FT                   /db_xref="GOA:A0A2S0SYT1"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:A0A2S0SYT1"
FT                   /protein_id="AWB14538.1"
FT                   /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT                   FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRENLRI
FT                   ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTETRPAGDRTFQKWAAVVVPSGEEQRYTCH
FT                   VQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGS
FT                   YSQAASSDSAQGSDVSLTA"
XX
SQ   Sequence 2666 BP; 501 A; 795 C; 839 G; 531 T; 0 other;
     atgctggtca tggcgccccg aaccgtcctc ctgctgctct cggcggccct ggccctgacc        60
     gagacctggg ccggtgagtg cgggtcggga gggaaatggc ctctgccggg aggagcgagg       120
     ggaccgcagg cgggggcgca ggacctgagg agccgcgccg ggaggagggt cgggcgggtc       180
     tcagcccctc ctcgccccca ggctcccact ccatgaggta tttctacacc tccgtgtccc       240
     ggcccggccg cggggagccc cgcttcatct cagtgggcta cgtggacgac acgcagttcg       300
     tgaggttcga cagcgacgcc gcgagtccga gagaggagcc gcgggcgccg tggatagagc       360
     aggaggggcc ggaatattgg gaccggaaca cacagatctg caagaccaac acacagactt       420
     accgagagaa cctgcggatc gcgctccgct actacaacca gagcgaggcc ggtgagtgac       480
     cccggcccgg ggcgcaggtc acgactcccc atcccccacg tacggcccgg gtcgccccga       540
     gtctccgggt ccgagatccg cctccctgag gccgcgggac ccgcccagac cctcgaccgg       600
     cgagagcccc aggcgcgttt acccggtttc attttcagtt gaggccaaaa tccccgcggg       660
     ttggtcgggg cggggcgggg ctcgggggga cggggctgac cgcggggccg gggccagggt       720
     ctcacaccct ccagaggatg tacggctgcg acgtggggcc ggacgggcgc ctcctccgcg       780
     ggcataacca gttcgcctac gacggcaagg attacatcgc cctgaacgag gacctgagct       840
     cctggaccgc ggcggacacc gcggctcaga tcacccagcg caagtgggag gcggcccgtg       900
     tggcggagca gctgagaacc tacctggagg gcacgtgcgt ggagtggctc cgcagatacc       960
     tggagaacgg gaaggagacg ctgcagcgcg cgggtaccag gggcagtggg gagccttccc      1020
     catctcctat aggtcgccgg ggatggcctc caacgagaag aagaggaaaa tgggatcagc      1080
     gctagaatgt cgccctccct tgaatggaga atggcatgag ttttcctgag tttcctctga      1140
     gggccccctc ttctctctag gacaattaag ggatgacgtc tctgaggaaa tggaggggaa      1200
     gacagtccct agaatactga tcaggggtcc cctttgaccc ctgcagcagc cttgggaacc      1260
     atgacttttc ctctcaggcc ttgttctctg cctcacactc agtgtgtttg gggctctgat      1320
     tccagcactt ctgagtcact ttacctccac tcagatcagg agcagaagtc tctgttcccc      1380
     gctcagagac tcgaactttc caatgaatag attatcccag gtgcctgcgt ccaggctggt      1440
     gtctgggttc tgtgcccctt ccccacccca ggtgtcctgt ccattctcag gctggtcaca      1500
     tgggtggtcc tagggtgtcc catgagagat gcaaagcgcc tgaattttct gactcttccc      1560
     atcagacccc ccaaagacac atgtgaccca ccaccccatc tctgaccatg aggccaccct      1620
     gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg      1680
     cgaggaccaa actcaggaca ccgagaccag accagcagga gacagaacct tccagaagtg      1740
     ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acatgccatg tacagcatga      1800
     ggggctgccg aagcccctca ccctgagatg gggtaaggag ggggatgagg ggtcatatct      1860
     cttctcaggg aaagcaggag cccttcagca gggtcagggc ccctcatctt cccctccttt      1920
     cccagagcca tcttcccagt ccaccgtccc catcgtgggc attgttgctg gcctggctgt      1980
     cctagcagtt gtggtcatcg gagctgtggt cgctgctgtg atgtgtagga ggaagagttc      2040
     aggtagggaa ggggtgaggg gtggggtctg ggttttcttg tcccactggg ggtttcaagc      2100
     cccaggtaga agtgttccct gcatcattac tgggaagcag catgcacaca ggggctaacg      2160
     cagcctggga ccctgtgtgc cagcacttac tcttttgtgc agcacatgtg acaatgaagg      2220
     acggatgtat caccttgatg gttgtggtgt tggggtcctg attccagcat tcatgagtca      2280
     ggggaaggtc cctgctaagg acagacctta ggagggcagt tggtccagga cccacacttg      2340
     ctttcctcgt gtttcctgat cctgccctgg gtctgtagtc atacttctgg aaattccttt      2400
     tgggtccaag actaggaggt tcctctaaga tctcatggcc ctgcttcctc ccagtcccct      2460
     cacaggacat tttcttccca caggtggaaa aggagggagc tactctcagg ctgcgtgtaa      2520
     gtggtggggg tgggagtgtg gaggagctca cccaccccat aattcctcct gtcccacgtc      2580
     tcctgtgggc tctgaccagg tcctgttttt gttctactcc agccagcgac agtgcccagg      2640
     gctctgatgt gtctctcaca gcttga                                           2666
//