Dbfetch
ID MF058639; SV 1; linear; genomic DNA; STD; HUM; 3322 BP. XX AC MF058639; XX DT 10-DEC-2017 (Rel. 135, Created) DT 10-DEC-2017 (Rel. 135, Last updated, Version 3) XX DE Homo sapiens MHC class I antigen (HLA-B) gene, HLA-B*40:06:04:02 allele, DE complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3322 RA Spierings E., Cornelissen C., Dehing L.; RT "Next generation sequencing of new HLA alleles, unconfirmed alleles, and RT unidentified exons and introns"; RL Unpublished. XX RN [2] RP 1-3322 RA Spierings E., Cornelissen C., Dehing L.; RT ; RL Submitted (01-MAY-2017) to the INSDC. RL Immunology, UMC Utrecht, Heidelberglaan 100, Utrecht 3584CX, The RL Netherlands XX DR MD5; 1639aeed63d5ae64637666a48d78d1db. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.5.0.8542 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3322 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene <285..>2960 FT /gene="HLA-B" FT /allele="HLA-B*40:06:04:02" FT mRNA join(<285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..>2960) FT /gene="HLA-B" FT /allele="HLA-B*40:06:04:02" FT /product="MHC class I antigen" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*40:06:04:02" FT /product="MHC class I antigen" FT /db_xref="GOA:E7CRP1" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:E7CRP1" FT /protein_id="ATY50904.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN FT LRGYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" XX SQ Sequence 3322 BP; 614 A; 965 C; 1048 G; 695 T; 0 other; gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc 720 ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacact tggcagacga 1020 tgtatggctg cgacgtgggg ccggacgggc gcctcctccg cgggcataac cagtacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgcg ctcctggacc gccgcggaca 1140 cggcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcgagtgc gtggagtggc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacacgtg acccaccacc ccatctctga ccatgaggcc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacactgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgagtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagaac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggtgggag tgtggaggag ctcacccacc ccctaattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtgcag 3000 tctgggggtg ggtggggcag tggggaaagg cctgggtaat ggagattctt tgattgggat 3060 gtttcgcgtg tgtggtgggc tgtttagact gtcatcactt accatgacta accagaattt 3120 gttcatgact gttgttttct gtagcctgag acagctgtct tgtgagggac tgagatgcag 3180 gatttcttca cgcctcccct ttgtgacttc aagagcctct ggcatctctt tctgcaaagg 3240 cacctgaatg tgtctgcgtc cctgttagca taatgtgagg aggtggagag accagcccac 3300 ccccgtgtcc actgtgaccc ct 3322 //