Dbfetch
ID M80470; SV 1; linear; genomic DNA; STD; HUM; 4745 BP.
XX
AC M80470;
XX
DT 07-DEC-1991 (Rel. 30, Created)
DT 17-JUN-2008 (Rel. 96, Last updated, Version 6)
XX
DE Human MHC class I HLA-J gene, exons 1-8 and partial cds.
XX
KW cell surface antigen; cell surface glycoprotein; class I gene;
KW inactive antigen; integral membrane protein;
KW major histocompatibility complex.
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-4745
RX PUBMED; 1602142.
RA Messer G., Zemmour J., Orr H.T., Parham P., Weiss E.H., Girdlestone J.;
RT "HLA-J, a second inactivated class I HLA gene related to HLA-G and HLA-A.
RT Implications for the evolution of the HLA-A-related genes";
RL J. Immunol. 148(12):4043-4053(1992).
XX
DR MD5; f9d31261591bafd42d440c5777414c13.
XX
CC On May 19, 1995 this sequence version replaced gi:188485.
XX
FH Key Location/Qualifiers
FH
FT source 1..4745
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="LCL 721"
FT /cell_type="lymphoblastiod"
FT /tissue_type="hematopoietic"
FT /db_xref="taxon:9606"
FT mRNA join(535..604,735..1004,1252..1527,2123..2397,2520..2636,
FT 3074..3106,3248..3295,3463..3467)
FT exon 535..604
FT /number=1
FT CDS join(535..604,735..1004,1252..1527,2123..2161)
FT /partial
FT /codon_start=1
FT /product="MHC class I HLA-J antigen"
FT /db_xref="IMGT/HLA:J*02:01"
FT /db_xref="InterPro:IPR001039"
FT /db_xref="InterPro:IPR011161"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR037055"
FT /db_xref="UniProtKB/TrEMBL:Q30175"
FT /protein_id="AAA66955.1"
FT /translation="MGSWRPEPSSCCSRDPALAETWAGSHSMRYFSTAVSWPGRGEPSF
FT IAVGYVDDTQFVRVDSDAVSLRMKTRARWVEQEGPEYWDLQTLGAKAQAQTDRVNLRTL
FT LRYYNQSEAGYHILQGMFGCDLGPDGRLLRGYEQYAYDGKDYIALNEDLRSWTAADTAA
FT QITQRKYEAANVAEQRRAYLEGTCMEWLRRHLENGKETLQRADPPQDTRDPPPSL"
FT exon 735..1004
FT /number=2
FT exon 1252..1527
FT /number=3
FT exon 2123..2397
FT /number=4
FT exon 2520..2636
FT /number=5
FT exon 3074..3106
FT /number=6
FT exon 3248..3295
FT /number=7
FT exon 3463..3467
FT /number=8
XX
SQ Sequence 4745 BP; 979 A; 1272 C; 1373 G; 1119 T; 2 other;
acctcattcc aggagctccc tctctggcac caagctccct ggggtgagtt ttctttttga 60
agagtccagg agaacaggta agcagtgggg aagcagggag tccatttcag ggacaggaat 120
tcccggatga aaagtgaaag gagagggacg gggcccaagc tgagggtttc ttcctggttt 180
ctcggacagc tcctggacca agactcaggg aacattgaga cagagcgttt gtcacaggag 240
gagcggggtc agggcgaagt cccagagccc caggcatggc tctcagggtc tcaggccccg 300
aaggcggtgc atgggctggg gaggtgcagc attggggatt ccccatctcc gcagagtttc 360
tcttctccct ctcccagcct gcgacgggtc cttcttcctg gacactcacg acgcggaccc 420
agttctcact cccactgagt gtcgggtttc tagggaagcc aatcagcgtc gcgcggcccc 480
ggttctaaag tccccacgca ccaccgggac tcggagtctc cccagacgcc gacgatgggg 540
tcatggcgcc ccgaaccctc ctcctgctgc tctcgggacc ctgccctggc cgagacctgg 600
gcgggtgagt gcggggtcag gagggaaacg gcctctgccg tgaggagcga aaggtccacc 660
tggctggggc gcaggacccg gggagccgcg ccgggaggag ggtcgggcgg gtctcagccc 720
ctcctcgccc ccaggctccc actccatgag gtatttcagc accgccgttt cctggccggg 780
ccgcggggag cccagcttca ttgccgtggg ctacgtggac gacacgcagt tcgtgcgggt 840
cgacagtgac gccgtgagtc tgaggatgaa gacgcgggcg cggtgggtgg agcaggaggg 900
gccggagtat tgggacctac agacactggg cgccaaggcc caggcacaga ctgaccgagt 960
gaacctgcgg accctgctcc gctactacaa ccagagcgag gcgggtgagt gaccccggcc 1020
cggggcgcag atcacttact ccccgctcca tgcctcacgg acggccctgg tcccctgagt 1080
ctccgggtcc aagatcgacc ccgaggctgc ggacctgcag agatcctcga cccgggagag 1140
ccccaggcgc ctttacctgg tttcatcttc agttgaggcc aaaatctccg caggttgcta 1200
gggtccgggc cagggctcgg tgggcggggc tgaccgcggg aactgggcca gggtatcaca 1260
tcctccaggg aatgtttggc tgcgacctgg ggcccgacgg gcgtctcctc cgcgggtatg 1320
agcagtatgc ctacgacggc aaggattaca tcgccctgaa cgaggacctg cgctcctgga 1380
ccgccgcgga taccgcggct cagattaccc agcgcaagta tgaggcggcc aatgtggctg 1440
agcaaaggag agcctacctg gagggcacct gcatggagtg gctccgcaga cacctggaga 1500
acgggaagga gacgctgcag cgcgcgggta ccaggggcca tggggagcct gctcgatctc 1560
ctgtagatct cccgggctgg cctcgcacaa ggaggggaag aaaatggaaa caccaccaga 1620
atatcgccct ccctcctgtc ctgacggaga ggaatcctcc tgggtttcca gatcctgtat 1680
cagagattga ctctgagggc ccaccctgct cttcctggga caattaaggg atgaagtctc 1740
tgagggagtg gaggggaaga caatccctgg aagactgatc cgcggtcccc tttcacccca 1800
cagcaacctt gggcaccagg acttttcctc ccgggccttg ttctctgcct cacactcaat 1860
gtgtcggagt ctgactccag ctcctctgag tcccttggcc tccactcaga tcaggaccag 1920
aagtccctgc taccctgctc agagactaga actttccaag gaataggaga ttatcccagg 1980
cgcctgtgtc caggctggtg tctgggctct gtgctccctt ccccacccca ggtgtcctat 2040
tcatcaggat ggtcacatgg gcgctgctgg ggtgtcccat gaggaatgca aagtgcctga 2100
gttttccgac tcttcctttc agaccccccc caagacacac gtgacccacc cccctctctg 2160
aacatgaggc ataacgaggt cctgggttct gggcttctac cctgcggaga tcacattgac 2220
ctggcagcgg gatggggagg accagaccca ggacatggag ctcgtggaga ccaggcccac 2280
aggggatgga accttccaga agtgggcggt tgtggtagtg ccttctggag aggaacagag 2340
atacacatgc catgtgcagc acaaggggcc tgcccaagcc cctcatcctg agatggggta 2400
aggagagaga tgggggcggc catgtctctt agggaaagca ggagcccctc tggagacctt 2460
tagcagggtc ggggctgggt cctggaggtc agaaccctca cattcccctc ctttcccaga 2520
gccctctccc cagcccacca tccccattgt gggtatcatt gctggcctgg ttctccttgg 2580
agctgtggtc actggagctg tggtcactgc tgtgatgtgg aggaagaaga gctcaggtgg 2640
ggaaggggtg aggagtcggg tttgagtttt cttgtcccac tgggggtttc aagctccagg 2700
tagaaatgtg ttctgcctgg ttaccgggaa gcaccatcca cattcatggg cctacccagc 2760
ctgggccctg tgtgccagca cttactcttt tgtaagcacc tgtgacaatg aaggacagat 2820
ttctcacctt gatgattgta gtgatgggga tctgacccca gtaatcacag gtcaggggaa 2880
ggtcctgctg aggacagacc ttaggagggc agttggtcag gaccacatct gctttcttgt 2940
tttctgatcc tgcccttggt ttgcagtcac acatttctgg aaacttctcg aggttccaag 3000
actaggaggt tcctctagga cctcatggcc ctgctacctt cctggcctct cacaggacgt 3060
tttcttcccg cagatagaaa aggagggagc tactctcagg ctgcaagtaa gtatgaagga 3120
ggctgatccc tgagatcctt gggatattgt ggttgggagc catgggggag ctcacccacc 3180
ccacaattcc tcctctagcc acatctcctg tgggatctga ccaggttctg tttttgttct 3240
accccaggca gccaaagtgc ccagggctct gatgtgtctc tcacggcttg taaagctgag 3300
accctgggga ggctgatgtg tgtgggttgt tggggtaaca gtggatatag ctgtgctatg 3360
gggtttcttt gacttggatg tattcagcac atgatgggct gttgaaggtg tgacccctca 3420
ctgtgagtga tatgaatttg ttcatgaata ttttttctat agtgtgagac agctgccttg 3480
tgtgggactg agaggcaaga tttgttcatg ccttcccttt gtgacttcaa gaaccctgac 3540
ttctctttct gcaaaggcat ctgaatgtgt ctgtgtccct ataggcntaa tgtgaggtgg 3600
tggggagacc agcccacacc cgtgtccacc atgaccctgt tccccacact gacctacatt 3660
ccttccccga tcacctttcc tgttccagag aagtggtgct gggatgtctc catctctgtc 3720
tcaacttcat ggtgcactga gctgtaactt cttacttccc tattaaaatt agaatctgag 3780
tataaattta cttttttcaa attatttcca tgacgggttg atgggttaat taaaggagaa 3840
gattcctaaa atttgagaga caaaataaat ggaagacatg agaaccttcc agagtccacg 3900
tgtttcttgt gctgatttgt tgcaggggag gagagtagat ggggctgtgc ccagtgtgtg 3960
ctcaggccac catgggcttt atgtggtcac agctcacctg ggtcatcttt gctgctccac 4020
tgtccttggc ccttcagtag aaccttgtcc caccaggacc tgtgatcaca gggacttgga 4080
tgtcacctag ggtggtccct acacatcgaa gtccttccgg tatgaagaga caaattttca 4140
gtcccctgta tcttttgccc tccttccagg tctctttcct ggattgtatt ttccatcttt 4200
ttccccagcc ttcttaaagg aagcagattc tgaaatttgc agagaggagg ggtcccatag 4260
tttctcatcg taggtaactt tctgttggaa ctcctcttct gctttcctac tcttcttcct 4320
gcctgagttg tagtaatccc agtgctggct ccaatccaaa ctcatgcatt tataaagcag 4380
agtctgattt agatttatat ggggttggaa aattggaccc acaaggctag gattatcttt 4440
cctgaacaga aaaatatggc tgtgcgctgc agtgtgcagg agggttggtg tgggaggagg 4500
tgggaaggac acacaagcag ccctggtgag aaaagcactg gcagcactga tgttggtgtg 4560
agatgatgtt gttctttagc tacgttaata aagatattgc ctttagaata cagaggtgct 4620
ctacagtgat cattcattca actgacattt gttgtctgct aggtatatga ctgtttttgc 4680
atttagaaaa catcattaaa gtaaaaacag aaaatttctg gccttgtggt gtatacgnct 4740
agatg 4745
//
