Dbfetch
ID LT989888; SV 1; linear; genomic DNA; STD; HUM; 3368 BP. XX AC LT989888; XX PR Project:PRJEB22275; XX DT 28-JUN-2019 (Rel. 141, Created) DT 28-JUN-2019 (Rel. 141, Last updated, Version 1) XX DE Homo sapiens HLA-C gene for MHC class I antigen, allele "C*03:44ext" XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Voorter E. C., Matern B.; RT ; RL Submitted (09-MAR-2018) to the INSDC. RL Maastricht University Medical Center, Transplantation Immunology, RL Transplantation Immunology, Tissue Typing, University Hospital Maastricht, RL P Debeylaan 25, 6202 AZ Maastricht, Netherlands XX DR MD5; 7f3670deb5f4a433df995c6ce91ef64e. XX FH Key Location/Qualifiers FH FT source 1..3368 FT /organism="Homo sapiens" FT /chromosome="6" FT /isolate="49002_Maas35" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT mRNA join(1..303,304..376,507..776,1022..1297,1885..2160, FT 2282..2401,2841..2873,2981..3028,3193..3197,3198..3368) FT /gene="HLA-C" FT /allele="C*03:44ext" FT /product="MHC class I antigen" FT 5'UTR 1..303 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /note="5'UTR" FT CDS join(304..376,507..776,1022..1297,1885..2160,2282..2401, FT 2841..2873,2981..3028,3193..3197) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /product="MHC class I antigen" FT /db_xref="UniProtKB/TrEMBL:A0A4Y7LJF4" FT /protein_id="SPI37852.1" FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYPYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT exon 304..376 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=1 FT intron 377..506 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=1 FT exon 507..776 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=2 FT intron 777..1021 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=2 FT exon 1022..1297 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=3 FT intron 1298..1884 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=3 FT exon 1885..2160 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=4 FT intron 2161..2281 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=4 FT exon 2282..2401 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=5 FT intron 2402..2840 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=5 FT exon 2841..2873 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=6 FT intron 2874..2980 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=6 FT exon 2981..3028 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=7 FT intron 3029..3192 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=7 FT exon 3193..3197 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /number=8 FT 3'UTR 3198..3368 FT /gene="HLA-C" FT /allele="C*03:44ext" FT /note="3'UTR" XX SQ Sequence 3368 BP; 628 A; 974 C; 1059 G; 707 T; 0 other; gcttggtgta ggagaagagg aatcaggacg aagtcccagg tcccgggcgg ggctctcagg 60 gtctcaggct ccaagggccg tgtctgcact ggggaggcgc cgcgttgagg attctccact 120 cccctgagtt tcacttcttc tcccaacctg cgtcgggtcc ttcttcctga atactcatga 180 cgcgtcccca attcccactc ccattgggtg tcggattcta gagaagccaa tcagcgtctc 240 cgcagtcccg gttctgaagt ccccagtcac ccacccggac tcagattctc cccagacgcc 300 gagatgcggg tcatggcgcc ccgaaccctc atcctgctgc tctcgggagc cctggccctg 360 accgagacct gggccggtga gtgcggggtt gggagggaat cggcctctgc ggagaggagc 420 gaggggcccg cccggcgagg gcgcaggacc cggggagccg cgcagggagg agggtcgggc 480 gggtctcagc ccctcctcgc ccccaggctc ccactccatg aggtatttct acaccgctgt 540 gtcccggccc ggccgcgggg agccccactt catcgcagtg ggctacgtgg acgacacgca 600 gttcgtgcgg ttcgacagcg acgccgcgag tccgagaggg gagccgcggg cgccgtgggt 660 ggagcaggag gggccggagt attgggaccg ggagacacag aagtacaagc gccaggcaca 720 gactgaccga gtgagcctgc ggaacctgcg cggctactac aaccagagcg aggccggtga 780 gtgaccccgg cccggggcgc aggtcacgac ccctcctcat cccccacgga cggcccgggt 840 cgccccaagt ctcccggtct gagatccacc ccgaggctgc ggaacccgcc cagaccctcg 900 accggagaga gccccagtca cctttacccg gtttcatttt cagtttaggc caaaatcccc 960 gcgggttggt cggggcgggg cggggctcgg gggacggggc tgaccgcggg ggcggggcca 1020 gggtctcaca tcatccagag gatgtatggc tgcgacgtgg ggcccgacgg gcgcctcctc 1080 cgcgggtatg accagtaccc ctacgacggc aaggattaca tcgccctgaa cgaggatctg 1140 cgctcctgga ccgccgcgga cacggcggct cagatcaccc agcgcaagtg ggaggcggcc 1200 cgtgaggcgg agcagctgag agcctacctg gagggcctgt gcgtggagtg gctccgcaga 1260 tacctgaaga atgggaagga gacgctgcag cgcgcgggta ccaggggcag tggggagcct 1320 tccccatctc ctgtagatct cccgggatgg cctcccacga ggaggggagg aaaatgggat 1380 cagcgctaga atatcgccct cccttgaatg gagaatggga tgagttttcc tgagtttcct 1440 ctgagggccc cctctgctct ctaggacaat taagggatga agtccttgag gaaatggagg 1500 ggaagacagt ccctagaata ctgatcaggg gtcccctttg accactttga ccactgcagc 1560 agctgtggtc aggctgctga cctttctctc aggccttgtt ctctgcctca cgctcaatgt 1620 gtttgaaggt ttgattccag cttttctgag tccttcggcc tccactcagg tcaggaccag 1680 aagtcgctgt tcctccctca gagactagaa ctttccaatg aataggagat tatcccaggt 1740 gcctgtgtcc aggctggcgt ctgggttctg tgcccccttc cccaccccag gtgtcctgtc 1800 cgttctcagg atggtcacat gggcgctgtt ggagtgtcgc aagagagata caaagtgtct 1860 gaattttctg actcttcccg tcagaacacc caaagacaca cgtgacccac catcccgtct 1920 ctgaccatga ggccaccctg aggtgctggg ccctgggctt ctaccctgcg gagatcacac 1980 tgacctggca gtgggatggg gaggaccaaa ctcaggacac tgagcttgtg gagaccaggc 2040 cagcaggaga tggaaccttc cagaagtggg cagctgtggt ggtgccttct ggagaagagc 2100 agagatacac gtgccatgtg cagcacgagg ggctgccgga gcccctcacc ctgagatggg 2160 gtaaggaggg ggatgagggg tgatgtgtct tctcagggaa agcagaagtc ctggagccct 2220 tcagccaggt cagggctgag gcttgggggt cagggcccct caccttcccc tcctttccca 2280 gagccgtctt cccagcccac catccccatc gtgggcatcg ttgctggcct ggctgtcctg 2340 gctgtcctag ctgtcctagg agctgtggtg gctgttgtga tgtgtaggag gaagagctca 2400 ggtagggaag gggtgaggag tggggtctgg gttttcttgt tccactggga gtttcaagcc 2460 ccaggtagaa gtgtgcccca cctcgttact ggaagcacca tccacacatg ggccatccca 2520 gcctgggacc ctgtgtgcca gcacttactc tgttgtgaag cacatgacaa tgaaggacag 2580 atgtatcacc ttgatgatta tggtgttggg gtccttgatt ccagcattca tgagtcaggg 2640 gaaggtccct gctaaggaca gaccttagga gggcagttgc tccagaaccc acagctgctt 2700 tccccgtgtt tcctgatcct gccctgggtc tgcagtcata gttctggaaa cttctcttgg 2760 gtccaagact aggaggttcc cctaagatcg catggccctg actcctccct gtcccctcac 2820 agggcatttt cttcccacag gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg 2880 atggcggtgg gcgtgtggag gagctcaccc accccataat tcctcttgtc ccacatctcc 2940 tgcgggctct gaccaggtct ttttttttgt tctaccccag ccagcaacag tgcccagggc 3000 tctgatgagt ctctcatcgc ttgtaaaggt gagattctgg ggagctgaag tggtcggggg 3060 tggggcagag ggaaaaggcc taggtaatgg ggatcctttg attgggacgt ttcgaatgtg 3120 tggtgagctg ttcagagtgt gatcacttac catgactgac ctgaatttgt tcatgactat 3180 tgtgttctgt agcctgagac agctgcctgt gtgggactga gatgcaggat ttcttcacac 3240 ctctcctttg tgacttcaag agcctctggc atctctttct gcaaaggcat ctgaatgtgt 3300 ctgcgttcct gttagcataa tgtgaggagg tggagagaca gcccaccccc gtgtccaccg 3360 tgacccct 3368 //