Dbfetch

ID   LT966338; SV 1; linear; genomic DNA; STD; HUM; 3918 BP.
XX
AC   LT966338;
XX
PR   Project:PRJEB23836;
XX
DT   10-JAN-2018 (Rel. 135, Created)
DT   10-JAN-2018 (Rel. 135, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE   DKMS-LSL-C-2017, allele HLA-C*07:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Albrecht V., Boehme I.;
RT   ;
RL   Submitted (12-DEC-2017) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Quality & Service, Advanced Projects, Tatzberg 47 ,
RL   Saxony, 01307 Dresden, Germany
XX
DR   MD5; 14e6339d88f5f12204fffded455bb760.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3918
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL-C-2017"
FT                   /db_xref="taxon:9606"
FT   exon            1..573
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=1
FT   CDS             join(501..573,704..973,1224..1499,2087..2362,2487..2606,
FT                   3047..3079,3187..3234,3399..3403)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /db_xref="GOA:Q6R739"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR010579"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q6R739"
FT                   /protein_id="SOU93975.1"
FT                   /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT                   FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRN
FT                   LRGYYNQSEDGSHTLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT                   AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT                   TCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGG
FT                   KGGSCSQAACSNSAQGSDESLITCKA"
FT   intron          574..703
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=1
FT   exon            704..973
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=2
FT   intron          974..1223
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=2
FT   exon            1224..1499
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=3
FT   intron          1500..2086
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=3
FT   exon            2087..2362
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=4
FT   intron          2363..2486
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=4
FT   exon            2487..2606
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=5
FT   intron          2607..3046
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=5
FT   exon            3047..3079
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=6
FT   intron          3080..3186
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=6
FT   exon            3187..3234
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=7
FT   intron          3235..3398
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=7
FT   exon            3399..3918
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:new"
FT                   /number=8
XX
SQ   Sequence 3918 BP; 756 A; 1102 C; 1212 G; 848 T; 0 other;
     ttattttgct ggatgtagtt taatattacc tgaggtgagg taaggtaagg caaagggtgg        60
     gaggcaggga gtccagttca gggacgggga ttccaggagg agaagtgaag gggaaggggc       120
     tgggcgcagc cttggggtct ctccctggtt tccacagaca gatccttgtc caggactcag       180
     gcacacagtg tgacaaagat gcttggtgta ggagaagagg gatcaggacg aagtcccagg       240
     tcccgggcgg ggctctcagg gtctcaggct ccaagggccg tgtctgcatt ggggaggcgc       300
     cgcgttgggg attctccact cccctgagtt tcacttctcc caacctgcgt cgggtccttc       360
     ttcctgaata ctcatgacgc gtccccaatt cccactccca ttgggtgtcg ggttctagag       420
     aagccaatca gcgtctccgc agtcccggtt ctaaagtccc cagtcaccca cccggactca       480
     cattctcccc agaggccgag atgcgggtca tggcgccccg agccctcctc ctgctgctct       540
     cgggaggcct ggccctgacc gagacctggg cctgtgagtg cggggttggg agggaagcgg       600
     cctctgcgga gaggagcgag gggccctccc ggcgagggcg caggacccgg ggagccgcgc       660
     agggaggtgg gtcgggcggg tctcagcccc tcctcgcccc caggctccca ctccatgagg       720
     tatttcgaca ccgccgtgtc ccggcccggc cgcggagagc cccgcttcat ctcagtgggc       780
     tacgtggacg acacgcagtt cgtgcggttc gacagcgacg ccgcgagtcc gagaggggag       840
     ccgcgggcgc cgtgggtgga gcaggagggg ccggagtatt gggaccggga gacacagaag       900
     tacaagcgcc aggcacaggc tgaccgagtg agcctgcgga acctgcgcgg ctactacaac       960
     cagagcgagg acggtgagtg accccggccc ggggcgcagg tcacgacccc tccccatccc      1020
     ccacggacgg cccgggtcgc ccagagtctc cccgtctgag atccacccca aggtggatct      1080
     gcggaacccg cccagaccct cgaccggaga gagccccagt cgcctttacc cggtttcatt      1140
     ttcggtttag gccaaaatcc ccgcgggttg gtcggggcgg ggcggggctc gggggactgg      1200
     gctgaccgcg ggggcggggc cagggtctca caccctccag aggatgtctg gctgcgacct      1260
     ggggcccgac gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg gcaaggatta      1320
     catcgccctg aacgaggacc tgcgctcctg gaccgccgcg gacaccgcgg ctcagatcac      1380
     ccagcgcaag ttggaggcgg cccgtgcggc ggagcagctg agagcctacc tggagggcac      1440
     gtgcgtggag tggctccgca gatacctgga gaacgggaaa gagacgctgc agcgcgcagg      1500
     taccaggggc agtggggagc cttccccatc tcctatagat ctcccgggat ggcctcccac      1560
     gaggagggga ggaaaatggg atcagcactg gaatatcgcc ctcccttgaa tggagaatgg      1620
     catgagtttt cctgagtttc ctctgagggc cccctctgct ctctaggaca attaagggat      1680
     gaagtctctg aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtctcctt      1740
     tgaccacttt gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg      1800
     ttctctgcct cacactcaat gtgtctgaag gtttgattcc agcttttctg agtcctgcag      1860
     cctccactca ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa      1920
     tgaataggag attatcccag gtgcctgtgt ccaggctggc gtctgggttc tctgccgcct      1980
     tccccacccc aggtgtcctg tccattctca ggatggtcac atgggcgctg ctggagtgtc      2040
     ccaagagaga tgcaaagtgt ctgaattttc tgactcttcc cgtcagaacc cccaaagaca      2100
     cacgtgaccc accaccccct ctctgaccat gaggccaccc tgaggtgctg ggccctgggc      2160
     ttctaccctg cggagatcac actgacctgg cagcgggatg gggaggacca gacccaggac      2220
     accgagcttg tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg      2280
     gtggtgcctt ctggacaaga gcagagatac acgtgccata tgcagcacga ggggctgcaa      2340
     gagcccctca ccctgagctg gggtaaggag gggaatgggg ggtcacatct cttatcagag      2400
     aaagcagaag tccttctgga gcccttcagc cgggtcaggg ctgaggcttg ggggtcaggg      2460
     cccctcacct tctcctcctt tcccagagcc atcttcccag cccaccatcc ccatcatggg      2520
     catcgttgct ggcctggctg tcctggttgt cctagctgtc cttggagctg tggtcaccgc      2580
     tatgatgtgt aggaggaaga gctcaggtag ggaaggggtg aagagcgggg tctgggtttt      2640
     cttgtcccac tgggagtttc aagccccagg tagaagtgtg ccccgccttg ttactggaag      2700
     caccatccac acatgggcca tcccagcctg ggaccctgtg tgccagcact tactcttttg      2760
     tgaagcacat gtgacaatga aggacggatg tatcaccttg atgattatgg tgttggggtc      2820
     ctgattccag cattcatgag tcaggggaag gtccctgcta aggacagacc ttaggagggc      2880
     agttggtcca gaacccacaa ctgctttccc catgtttcct gatcctgccc tgggtctgca      2940
     gtcgtagttc tggaaacttc tcttgggtcc aagactagga ggttccccta agatcacatg      3000
     gccctgcctc ctcccagtcc cctcataggg cattttcttc ccacaggtgg aaaaggaggg      3060
     agctgctctc aggctgcgtg taagtgatgg cggcgggcgt gtggaggagc tcacctactc      3120
     cataattcct cttgtcccac atctcctgcg ggctctgacc aggtcttttt ttttgttcta      3180
     ccccaggcag caacagtgcc cagggctctg atgagtctct catcacttgt aaaggtgaga      3240
     ttctggggag ctgaagtggt cgggggtggg gcagagggaa aaggcctggg taatggggat      3300
     tctttgattg ggacgtttcg agtgtgtggt gggccgttca gagtgtcatc gcttaccatg      3360
     actgacctga atttgttcat gactattgtg ttctgtagcc tgagacagct gcctgtgtgg      3420
     gactgagatg caggatttct tcacacctct cctttgtgac ttcaagagcc tctggcatct      3480
     ctttctgcaa aggcacctga atgtgtctgc gttcctgtta gcataatgtg aggaggtgga      3540
     gagacagccc acccccgtgt ccaccgtgac ccctgtcccc acactgacct gtgttccctc      3600
     cccgatcatc tttcctgttc cagagaggtg gggctggatg tctccatctc tgtctcaaat      3660
     tcatggtgca ctgagctgca acttcttact tccctaatga agttaagaac ctgaatataa      3720
     atttgtgttc tcaaatattt gctatgaagc gttgatggat taattaaata agtcaattcc      3780
     tagaagttga gagagcaaat aaagacctga gaaccttcca gaatttgcat gttcgctgtg      3840
     ctgagtctgt tgcaggtggg ggtggggaag gctgtgagga gccgagtgtg gacggggcct      3900
     gtgcctagtt gctgttca                                                    3918
//