Dbfetch
ID LT963281; SV 1; linear; genomic DNA; STD; HUM; 3323 BP. XX AC LT963281; XX PR Project:PRJEB21509; XX DT 29-AUG-2018 (Rel. 137, Created) DT 29-AUG-2018 (Rel. 137, Last updated, Version 1) XX DE Homo sapiens HLA-B gene for MHC class I antigen, allele HLA-B*44:03:01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA ; RT ; RL Submitted (10-NOV-2017) to the INSDC. RL HLA Informatics Group, Anthony Nolan Research Institute, The Royal Free RL Hospital, Pond Street, London, NW3 2QG, United Kingdom XX RN [1] RA Hayhurst D J.; RT ; RL Submitted (11-AUG-2017) to the INSDC. RL HLA Informatics Group, Anthony Nolan Research Institute, The Royal Free RL Hospital, Pond Street, London, NW3 2QG, United Kingdom XX DR MD5; adcf2410453bd9a05961282d4b423fbc. DR Ensembl-Gn; ENSG00000224608; homo_sapiens. DR Ensembl-Tr; ENST00000435618; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..3323 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN00826" FT /db_xref="taxon:9606" FT CDS join(285..357,487..756,1000..1275,1851..2126,2220..2336, FT 2778..2810,2917..2960) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /product="MHC class I antigen" FT /function="antigen presenting molecule" FT /db_xref="GOA:Q2L6G2" FT /db_xref="InterPro:IPR001039" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR011161" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="InterPro:IPR037055" FT /db_xref="UniProtKB/TrEMBL:Q2L6G2" FT /protein_id="SOR74825.1" FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRT FT ALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQLRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHE FT VTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT exon 285..357 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=1 FT intron 358..486 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=1 FT exon 487..756 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=2 FT intron 757..999 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=2 FT exon 1000..1275 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=3 FT intron 1276..1850 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=3 FT exon 1851..2126 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=4 FT intron 2127..2219 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=4 FT exon 2220..2336 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=5 FT intron 2337..2777 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=5 FT exon 2778..2810 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=6 FT intron 2811..2916 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=6 FT exon 2917..2960 FT /gene="HLA-B" FT /allele="HLA-B*44:03:01:new" FT /number=7 XX SQ Sequence 3323 BP; 614 A; 965 C; 1053 G; 691 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct cggagggccg 60 cgtctgcaat ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcggggt cgggagggaa atggcctctg tggggaggag agaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480 ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg 540 agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600 acgccacgag tccgaggaag gagccgcggg cgccatggat agagcaggag gggccggagt 660 attgggaccg ggagacacag atctccaaga ccaacacaca gacttaccga gagaacctgc 720 gcaccgcgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780 aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840 atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900 tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960 gggctcgggg gacggggctg accgcggggc cggggccagg gtctcacatc atccagagga 1020 tgtacggctg cgacgtgggg ccggacgggc gcctcctccg cgggtatgac caggacgcct 1080 acgacggcaa ggattacatc gccctgaacg aggacctgag ctcctggacc gcggcggaca 1140 ccgcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag cagctgagag 1200 cctacctgga gggcctgtgc gtggagtcgc tccgcagata cctggagaac gggaaggaga 1260 cgctgcagcg cgcgggtacc aggggcagtg gggagccttc cccatctcct ataggtcgcc 1320 ggggatggcc tcccacgaga agaggaggaa aatgggatca gcgctagaat gtcgccctcc 1380 cttgaatgga gaatggcatg agttttcctg agtttcctct gagggccccc tcttctctct 1440 aggacaatta agggatgacg tctctgagga aatggagggg aagacagtcc ctagaatact 1500 gatcaggggt cccctttgac ccctgcagca gccttgggaa ccgtgacttt tcctctcagg 1560 ccttgttctc tgcctcacac tcagtgtgtt tggggctctg attccagcac ttctgagtca 1620 ctttacctcc actcagatca ggagcagaag tccctgttcc ccgctcagag actcgaactt 1680 tccaatgaat aggagattat cccaggtgcc tgcgtccagg ctggtgtctg ggttctgtgc 1740 cccttcccca ccccaggtgt cctgtccatt ctcaggctgg tcacatgggt ggtcctaggg 1800 tgtcccatga gagatgcaaa gcgcctgaat tttctgactc ttcccatcag accccccaaa 1860 gacacatgtg acccaccacc ccatctctga ccatgaggtc accctgaggt gctgggccct 1920 gggcttctac cctgcggaga tcacactgac ctggcagcgg gatggcgagg accaaactca 1980 ggacaccgag cttgtggaga ccagaccagc aggagataga accttccaga agtgggcagc 2040 tgtggtggtg ccttctggag aagagcagag atacacatgc catgtacagc atgaggggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc agcagggtca gggcccctca tcttcccttc ctttcccaga 2220 gccgtcttcc cagtccaccg tccccatcgt gggcattgtt gctggcctgg ctgtcctagc 2280 agttgtggtc atcggagctg tggtcgctgc tgtgatgtgt aggaggaaga gctcaggtag 2340 ggaaggggtg aggggtgggg tctgggtttt cttgtcccac tgggggtttc aagccccagg 2400 tagaagtgtt ccctgcctca ttactgggaa gcagcatcca cacaggggct aacgcagcct 2460 gggaccctgt gtgccagcac ttactctttt gtgcagcaca tgtgacaatg aaggacggat 2520 gtatcacctt ggtggttgtg gtgttggggt cctgattcca gcattcatga gtcaggggaa 2580 ggtccctgct aaggacagac cttaggaggg cagttggtcc aggacccaca cttgctttcc 2640 tcgtgtttcc tgatcctgcc ttgggtctgt agtcatactt ctggaaattc cttttgggtc 2700 caagacgagg aggttcctct aagatctcat ggccctgctt cctcccagtc ccctcacagg 2760 gcattttctt cccacaggtg gaaaaggagg gagctactct caggctgcgt gtaagtgatg 2820 ggggcgggag tgtggaggag ctcacccacc ccataattcc tcctgtccca cgtctcctgc 2880 gggctctgac caggtcctgt ttttgttcta ctccaggcag cgacagtgcc cagggctctg 2940 atgtgtctct cacagcttga aaaggtgaga ttcttggggt ctagagtggg tggggtggca 3000 ggtctggggg tgggtggggc agtggggaaa ggcctgggta atggagattc tttgattggg 3060 atgtttcgcg tgtgtggtgg gctgtttaga gtgtcatcac ttaccatgac taaccagaat 3120 ttgttcatga ctgttgtttt ctgtagcctg agacagctgt cttgtgaggg actgagatgc 3180 aggatttctt cacgcctccc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3240 ggcacctgaa tgtgtctgcg tccctgttag cataatgtga ggaggtggag agacagccca 3300 cccccgtgtc caccgtgacc cct 3323 //