Dbfetch

ID   LT908379; SV 1; linear; genomic DNA; STD; HUM; 3348 BP.
XX
AC   LT908379;
XX
PR   Project:PRJEB22644;
XX
DT   09-JAN-2020 (Rel. 143, Created)
DT   09-JAN-2020 (Rel. 143, Last updated, Version 1)
XX
DE   Homo sapiens HLA-C gene for MHC class I antigen, allele HLA-C*03:03:04
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Marsh GE S.;
RT   ;
RL   Submitted (15-SEP-2017) to the INSDC.
RL   ANRI, HLA Informatics Group, Royal Free Hospital, London, NW3 2QG, NW3 2NU,
RL   United Kingdom
XX
DR   MD5; 1d8bbacaf26b01c41256e411289f4f24.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3348
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="AN00678"
FT                   /db_xref="taxon:9606"
FT   CDS             join(284..356,487..756,1002..1277,1865..2140,2262..2381,
FT                   2821..2853,2961..3008,3173..3177)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /product="MHC class I antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="SOF03708.1"
FT                   /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFYTAVSRPGRGEPH
FT                   FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN
FT                   LRGYYNQSEARSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA
FT                   AQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQRAEHPKTHVTHHPVSDHE
FT                   ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT                   KGGSCSQAASSNSAQGSDESLIACKA"
FT   exon            284..356
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=1
FT   intron          357..486
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=1
FT   exon            487..756
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=2
FT   intron          757..1001
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=2
FT   exon            1002..1277
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=3
FT   intron          1278..1864
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=3
FT   exon            1865..2140
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=4
FT   intron          2141..2261
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=4
FT   exon            2262..2381
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=5
FT   intron          2382..2820
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=5
FT   exon            2821..2853
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=6
FT   intron          2854..2960
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=6
FT   exon            2961..3008
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=7
FT   intron          3009..3172
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=7
FT   exon            3173..3177
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*03:03:04"
FT                   /number=8
XX
SQ   Sequence 3348 BP; 624 A; 974 C; 1048 G; 702 T; 0 other;
     aatcaggacg aagtcccagg tcccgggcgg ggctctcagg gtctcaggct ccaagggccg        60
     tgtctgcact ggggaggcgc cgcgttgagg attctccact cccctgagtt tcacttcttc       120
     tcccaacctg cgtcgggtcc ttcttcctga atactcatga cgcgtcccca attcccactc       180
     ccattgggtg tcggattcta gagaagccaa tcagcgtctc cgcagtcccg gttctgaagt       240
     ccccagtcac ccacccggac tcagattctc cccagacgcc gagatgcggg tcatggcgcc       300
     ccgaaccctc atcctgctgc tctcgggagc cctggccctg accgagacct gggccggtga       360
     gtgcggggtt gggagggaat cggcctctgc ggagaggagc gaggggcccg cccggcgagg       420
     gcgcaggacc cggggagccg cgcagggagg agggtcgggc gggtctcagc ccctcctcgc       480
     ccccaggctc ccactccatg aggtatttct acaccgctgt gtcccggccc ggccgcgggg       540
     agccccactt catcgcagtg ggctacgtgg acgacacgca gttcgtgcgg ttcgacagcg       600
     acgccgcgag tccgagaggg gagccgcggg cgccgtgggt ggagcaggag gggccggagt       660
     attgggaccg ggagacacag aagtacaagc gccaggcaca gactgaccga gtgagcctgc       720
     ggaacctgcg cggctactac aaccagagcg aggccagtga gtgaccccgg cccggggcgc       780
     aggtcacgac ccctcctcat cccccacgga cggcccgggt cgccccaagt ctcccggtct       840
     gagatccacc ccgaggctgc ggaacccgcc cagaccctcg accggagaga gccccagtca       900
     cctttacccg gtttcatttt cagtttaggc caaaatcccc gcgggttggt cggggcgggg       960
     cggggctcgg gggacggggc tgaccgcggg ggcggggcca gggtctcaca tcatccagag      1020
     gatgtacggc tgcgacgtgg ggcccgacgg gcgcctcctc cgcgggtatg accagtacgc      1080
     ctacgacggc aaggattaca tcgccctgaa cgaggatctg cgctcctgga ccgccgcgga      1140
     cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagctgag      1200
     agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctgaaga atgggaagga      1260
     gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctgtagatct      1320
     cccgggatgg cctcccacga ggaggggagg aaaatgggat cagcgctaga atatcgccct      1380
     cccttgaatg gagaatggga tgagttttcc tgagtttcct ctgagggccc cctctgctct      1440
     ctaggacaat taagggatga agtccttgag gaaatggagg ggaagacagt ccctagaata      1500
     ctgatcaggg gtcccctttg accactttga ccactgcagc agctgtggtc aggctgctga      1560
     cctttctctc aggccttgtt ctctgcctca cgctcaatgt gtttgaaggt ttgattccag      1620
     cttttctgag tccttcggcc tccactcagg tcaggaccag aagtcgctgt tcctccctca      1680
     gagactagaa ctttccaatg aataggagat tatcccaggt gcctgtgtcc aggctggcgt      1740
     ctgggttctg tgcccccttc cccaccccag gtgtcctgtc cgttctcagg atggtcacat      1800
     gggcgctgtt ggagtgtcgc aagagagata caaagtgtct gaattttctg actcttcccg      1860
     tcagaacacc caaagacaca cgtgacccac catcccgtct ctgaccatga ggccaccctg      1920
     aggtgctggg ccctgggctt ctaccctgcg gagatcacac tgacctggca gtgggatggg      1980
     gaggaccaaa ctcaggacac tgagcttgtg gagaccaggc cagcaggaga tggaaccttc      2040
     cagaagtggg cagctgtggt ggtgccttct ggagaagagc agagatacac gtgccatgtg      2100
     cagcacgagg ggctgccgga gcccctcacc ctgagatggg gtaaggaggg ggatgagggg      2160
     tgatgtgtct tctcagggaa agcagaagtc ctggagccct tcagccaggt cagggctgag      2220
     gcttgggggt cagggcccct caccttcccc tcctttccca gagccgtctt cccagcccac      2280
     catccccatc gtgggcatcg ttgctggcct ggctgtcctg gctgtcctag ctgtcctagg      2340
     agctgtggtg gctgttgtga tgtgtaggag gaagagctca ggtagggaag gggtgaggag      2400
     tggggtctgg gttttcttgt tccactggga gtttcaagcc ccaggtagaa gtgtgcccca      2460
     cctcgttact ggaagcacca tccacacatg ggccatccca gcctgggacc ctgtgtgcca      2520
     gcacttactc tgttgtgaag cacatgacaa tgaaggacag atgtatcacc ttgatgatta      2580
     tggtgttggg gtccttgatt ccagcattca tgagtcaggg gaaggtccct gctaaggaca      2640
     gaccttagga gggcagttgc tccagaaccc acagctgctt tccccgtgtt tcctgatcct      2700
     gccctgggtc tgcagtcata gttctggaaa cttctcttgg gtccaagact aggaggttcc      2760
     cctaagatcg catggccctg actcctccct gtcccctcac agggcatttt cttcccacag      2820
     gtggaaaagg agggagctgc tctcaggctg cgtgtaagtg atggcggtgg gcgtgtggag      2880
     gagctcaccc accccataat tcctcttgtc ccacatctcc tgcgggctct gaccaggtct      2940
     ttttttttgt tctaccccag ccagcaacag tgcccagggc tctgatgagt ctctcatcgc      3000
     ttgtaaaggt gagattctgg ggagctgaag tggtcggggg tggggcagag ggaaaaggcc      3060
     taggtaatgg ggatcctttg attgggacgt ttcgaatgtg tggtgagctg ttcagagtgt      3120
     gatcacttac catgactgac ctgaatttgt tcatgactat tgtgttctgt agcctgagac      3180
     agctgcctgt gtgggactga gatgcaggat ttcttcacac ctctcctttg tgacttcaag      3240
     agcctctggc atctctttct gcaaaggcat ctgaatgtgt ctgcgttcct gttagcataa      3300
     tgtgaggagg tggacagaca gcccaccccc gtgtccaccg tgacccct                   3348
//